Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 4
- vacuole 5
- plasma membrane 5
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU3Hr1G012050.1 | Barley | plasma membrane | 64.55 | 59.08 |
| TraesCS3B01G075300.1 | Wheat | plasma membrane | 64.29 | 58.55 |
| HORVU3Hr1G012080.10 | Barley | plastid | 76.98 | 57.51 |
| TraesCS3D01G064700.2 | Wheat | plasma membrane | 82.8 | 48.68 |
| TraesCS3D01G063800.1 | Wheat | plasma membrane | 65.87 | 38.91 |
| TraesCS3D01G062600.1 | Wheat | plasma membrane | 65.34 | 38.24 |
| TraesCS3D01G062500.1 | Wheat | plasma membrane | 60.32 | 36.89 |
| TraesCS2D01G419800.1 | Wheat | mitochondrion | 56.88 | 34.9 |
| TraesCS2D01G419700.1 | Wheat | cytosol | 59.26 | 33.79 |
| TraesCS3D01G012900.1 | Wheat | plasma membrane | 53.44 | 31.17 |
| Solyc07g055410.1.1 | Tomato | cytosol | 6.35 | 29.63 |
| TraesCS3D01G064800.1 | Wheat | cytosol, plasma membrane, plastid | 38.89 | 27.95 |
| TraesCS3D01G012800.1 | Wheat | plasma membrane | 30.95 | 26.47 |
| TraesCS3D01G013600.1 | Wheat | plastid | 26.98 | 24.17 |
| Solyc07g055420.1.1 | Tomato | cytosol | 11.38 | 19.72 |
| TraesCS2D01G591000.1 | Wheat | plasma membrane | 23.55 | 15.4 |
| VIT_12s0028g01640.t01 | Wine grape | plasma membrane | 21.69 | 12.35 |
| VIT_08s0032g00810.t01 | Wine grape | cytosol | 5.82 | 12.22 |
| TraesCS6D01G386500.1 | Wheat | cytosol | 16.93 | 12.03 |
| PGSC0003DMT400044522 | Potato | cytosol, nucleus, plasma membrane | 22.49 | 11.68 |
| Solyc07g055630.2.1 | Tomato | cytosol | 9.79 | 11.67 |
| TraesCS5D01G018800.1 | Wheat | cytosol | 19.84 | 11.63 |
| PGSC0003DMT400044506 | Potato | plasma membrane | 16.4 | 11.46 |
| TraesCS6D01G386200.1 | Wheat | plasma membrane | 24.6 | 11.44 |
| PGSC0003DMT400044515 | Potato | plasma membrane | 25.13 | 11.38 |
| TraesCS1D01G014300.1 | Wheat | plasma membrane | 19.84 | 11.33 |
| PGSC0003DMT400044620 | Potato | cytosol | 15.08 | 11.07 |
| TraesCS7D01G231000.1 | Wheat | mitochondrion, plasma membrane | 24.6 | 11.06 |
| PGSC0003DMT400044673 | Potato | plasma membrane | 24.34 | 11.06 |
| VIT_12s0028g01650.t01 | Wine grape | plasma membrane | 24.6 | 11.05 |
| Solyc07g055650.1.1 | Tomato | cytosol, plasma membrane, plastid | 11.9 | 10.71 |
| TraesCS7D01G368100.1 | Wheat | plasma membrane | 23.81 | 10.7 |
| PGSC0003DMT400096753 | Potato | plasma membrane | 23.55 | 10.68 |
| TraesCS3D01G480200.1 | Wheat | mitochondrion | 21.96 | 10.63 |
| VIT_12s0028g01530.t01 | Wine grape | plasma membrane | 23.55 | 10.57 |
| PGSC0003DMT400044528 | Potato | plasma membrane | 23.55 | 10.52 |
| VIT_12s0028g01450.t01 | Wine grape | plasma membrane | 11.64 | 10.48 |
| VIT_12s0028g01430.t01 | Wine grape | plasma membrane | 21.69 | 10.26 |
| TraesCS5D01G469700.1 | Wheat | plasma membrane | 23.81 | 10.23 |
| TraesCS2D01G427100.1 | Wheat | extracellular, plasma membrane | 22.49 | 10.22 |
| VIT_12s0028g01460.t01 | Wine grape | plasma membrane | 20.9 | 10.17 |
| PGSC0003DMT400044608 | Potato | plasma membrane | 22.49 | 10.11 |
| PGSC0003DMT400073253 | Potato | plasma membrane | 21.96 | 9.96 |
| Solyc02g072070.2.1 | Tomato | plasma membrane | 20.9 | 9.95 |
| VIT_12s0028g01280.t01 | Wine grape | plasma membrane | 22.49 | 9.87 |
| PGSC0003DMT400044668 | Potato | plasma membrane | 21.69 | 9.74 |
| VIT_12s0028g01630.t01 | Wine grape | plastid | 22.49 | 9.51 |
| TraesCS6D01G310400.1 | Wheat | plasma membrane | 21.69 | 9.2 |
| TraesCS5D01G519800.1 | Wheat | plasma membrane | 20.9 | 9.16 |
| PGSC0003DMT400044503 | Potato | extracellular, plasma membrane, vacuole | 19.58 | 8.97 |
| TraesCS5D01G243800.1 | Wheat | endoplasmic reticulum, plasma membrane | 20.9 | 8.67 |
| TraesCS5D01G519600.1 | Wheat | cytosol | 10.05 | 8.14 |
| TraesCS5D01G001400.1 | Wheat | plasma membrane | 20.37 | 7.88 |
| TraesCS7D01G086800.1 | Wheat | plasma membrane | 8.2 | 6.9 |
| VIT_12s0028g01520.t01 | Wine grape | plasma membrane | 23.81 | 6.81 |
| VIT_12s0028g01270.t01 | Wine grape | plasma membrane | 21.96 | 6.73 |
| Solyc07g055640.1.1 | Tomato | cytosol | 11.11 | 5.12 |
| Solyc07g055580.1.1 | Tomato | plasma membrane | 3.7 | 4.76 |
| Solyc07g055400.1.1 | Tomato | cytosol | 1.06 | 1.7 |
| Solyc07g055670.1.1 | Tomato | cytosol | 1.06 | 1.69 |
| PGSC0003DMT400044735 | Potato | cytosol | 0.53 | 1.14 |
| Solyc07g055570.1.1 | Tomato | cytosol | 0.26 | 0.55 |
| VIT_08s0032g00830.t01 | Wine grape | cytosol | 0.0 | 0.0 |
| Solyc07g055430.1.1 | Tomato | cytosol | 0.0 | 0.0 |
Protein Annotations
| Gene3D:2.60.110.10 | Gene3D:3.30.200.20 | MapMan:35.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004672 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006464 | GO:GO:0006468 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 | GO:GO:0019538 | InterPro:IPR000719 |
| InterPro:IPR001938 | InterPro:IPR037176 | InterPro:Kinase-like_dom_sf | InterPro:Osmotin/thaumatin-like_sf | PFAM:PF00314 | PIRSF:PIRSF002703 |
| PRINTS:PR00347 | ScanProsite:PS00107 | PFscan:PS50011 | PFscan:PS51367 | PANTHER:PTHR27002 | PANTHER:PTHR27002:SF329 |
| InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS | SMART:SM00205 | SUPFAM:SSF49870 | SUPFAM:SSF56112 | SignalP:SignalP-noTM |
| TMHMM:TMhelix | InterPro:Thaumatin | EnsemblPlantsGene:TraesCS3D01G062900 | EnsemblPlants:TraesCS3D01G062900.1 | SEG:seg | : |
Description
No Description!
Coordinates
chr3D:+:27759756..27761451
Molecular Weight (calculated)
41009.3 Da
IEP (calculated)
8.195
GRAVY (calculated)
-0.175
Length
378 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAVGVSSPL LLLLLLAATS EAITFYITNG CPYTIWPAAL PIGRASQLDP GKDWTLNTGQ PNSTRLWART GCSLDGNGTG MCQTGNCGSL LACKANGQPP
101: NTIAEFMLGG FNNQDFFDIS LVEGFNVPMD FLPVPAKGGP GCNKGPRCRA NIAAQCPTSL KAPGGCNNPC TVFKHDRYCC TGSAASNCST TDYSDFFKQM
201: CPDAYSYPMD DSTSTFSCPA GTNYKVVFCP LTNQAVSPSP LPAPPAEVKP TGPTTMKPKS STIRTVVAIL APIGGFIFLH LITFYLCKRR IQRRHEMQEE
301: KEFGELQGTP MRFTFQQLKA ATEQFTEKLG EGGFGSVFKG QFGDERIAVK RLDRSEKSHR LLVYEYMRIL GQMNLLST
101: NTIAEFMLGG FNNQDFFDIS LVEGFNVPMD FLPVPAKGGP GCNKGPRCRA NIAAQCPTSL KAPGGCNNPC TVFKHDRYCC TGSAASNCST TDYSDFFKQM
201: CPDAYSYPMD DSTSTFSCPA GTNYKVVFCP LTNQAVSPSP LPAPPAEVKP TGPTTMKPKS STIRTVVAIL APIGGFIFLH LITFYLCKRR IQRRHEMQEE
301: KEFGELQGTP MRFTFQQLKA ATEQFTEKLG EGGFGSVFKG QFGDERIAVK RLDRSEKSHR LLVYEYMRIL GQMNLLST
001: MANYSSIHIL FLVFITSGIA VSAATVFTLQ NSCPYTVWPG ILSGNDNTLG DGGFPLTPGA SVQLTAPAGW SGRFWARTGC NFDASGHGNC GTGDCGGVLK
101: CNGGGVPPVT LAEFTLVGDG GKDFYDVSLV DGYNVEMGIK PQGGSGDCHY AGCVADVNAV CPNELRLMDP HTGIIAACKS ACAAFNSEEF CCTGAHATPQ
201: TCSPTHYSAM FKSACPGAYS YAYDDATSTF TCTGSNYLIS FCPTRN
101: CNGGGVPPVT LAEFTLVGDG GKDFYDVSLV DGYNVEMGIK PQGGSGDCHY AGCVADVNAV CPNELRLMDP HTGIIAACKS ACAAFNSEEF CCTGAHATPQ
201: TCSPTHYSAM FKSACPGAYS YAYDDATSTF TCTGSNYLIS FCPTRN
Arabidopsis Description
Pathogenesis-related thaumatin superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q1PFD2]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.