Factsheet for VIT_12s0028g01640.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 4
golgi 1
nucleus 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	plasma membrane
MultiLoc:	plasma membrane
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G002240.1	Barley	cytosol	22.14	59.76
TraesCS3A01G015300.1	Wheat	cytosol	28.92	56.3
TraesCS3A01G063800.1	Wheat	cytosol	14.46	53.93
VIT_08s0032g00830.t01	Wine grape	cytosol	8.28	53.92
TraesCS3A01G014700.1	Wheat	cytosol	26.96	53.75
VIT_12s0028g01450.t01	Wine grape	plasma membrane	32.68	51.67
VIT_12s0028g01650.t01	Wine grape	plasma membrane	63.55	50.12
TraesCSU01G045500.1	Wheat	plasma membrane	28.46	49.22
HORVU3Hr1G002230.1	Barley	plasma membrane	11.9	49.07
TraesCS7B01G273000.1	Wheat	plastid	29.37	48.27
TraesCS5A01G458600.1	Wheat	nucleus, plasma membrane, plastid	30.87	48.24
VIT_12s0028g01630.t01	Wine grape	plastid	63.7	47.32
VIT_08s0032g00810.t01	Wine grape	cytosol	12.65	46.67
TraesCS3D01G013600.1	Wheat	plastid	29.07	45.73
TraesCS6B01G444200.1	Wheat	cytosol	35.54	45.65
HORVU2Hr1G098980.1	Barley	cytosol, mitochondrion	8.13	44.63
TraesCS3A01G064400.1	Wheat	cytosol	33.13	43.22
VIT_12s0028g01490.t01	Wine grape	cytosol	7.08	42.73
TraesCS6D01G386500.1	Wheat	cytosol	34.19	42.67
TraesCS3B01G079400.1	Wheat	cytosol, plasma membrane, plastid	32.53	42.11
TraesCS3D01G012800.1	Wheat	plasma membrane	27.71	41.63
TraesCS3A01G016100.1	Wheat	cytosol	7.68	41.46
TraesCS5B01G468100.1	Wheat	nucleus	35.99	40.99
TraesCS3A01G015100.1	Wheat	plasma membrane	29.07	40.8
TraesCSU01G045100.1	Wheat	cytosol	7.53	40.65
TraesCSU01G166600.1	Wheat	cytosol	7.53	40.65
HORVU3Hr1G002210.3	Barley	plasma membrane	29.37	40.21
TraesCS3D01G064800.1	Wheat	cytosol, plasma membrane, plastid	31.78	40.11
GSMUA_Achr6P05560_001	Banana	plasma membrane	31.78	39.66
VIT_12s0028g01460.t01	Wine grape	plasma membrane	45.78	39.12
TraesCS3A01G063700.1	Wheat	cytosol, plasma membrane, plastid	32.53	38.85
HORVU6Hr1G092730.1	Barley	plasma membrane	14.16	38.84
TraesCS3A01G064300.1	Wheat	cytosol	32.23	38.42
GSMUA_Achr6P05570_001	Banana	mitochondrion, plastid	33.89	38.27
TraesCS3D01G062500.1	Wheat	plasma membrane	35.39	38.03
TraesCS6B01G445200.1	Wheat	cytosol	36.45	37.58
TraesCS4A01G026200.1	Wheat	cytosol, nucleus, plasma membrane	40.21	37.19
TraesCS3D01G064700.2	Wheat	plasma membrane	35.84	37.01
TraesCS2D01G419800.1	Wheat	mitochondrion	34.19	36.85
TraesCS3B01G076900.1	Wheat	plasma membrane	35.54	36.76
TraesCS1D01G014300.1	Wheat	plasma membrane	36.6	36.71
VIT_12s0028g01430.t01	Wine grape	plasma membrane	43.67	36.3
TraesCS3D01G063800.1	Wheat	plasma membrane	34.94	36.25
EES03148	Sorghum	plasma membrane	32.83	36.15
TraesCS7A01G354700.1	Wheat	plastid	38.55	36.06
TraesCS3B01G077000.1	Wheat	plasma membrane	34.64	35.94
HORVU1Hr1G005720.5	Barley	cytosol, plasma membrane	41.57	35.84
EES14230	Sorghum	plasma membrane	42.77	35.72
Zm00001d053135_P001	Maize	plasma membrane	34.49	35.5
TraesCS3D01G062600.1	Wheat	plasma membrane	34.49	35.45
TraesCS2A01G271900.1	Wheat	plasma membrane	41.87	35.37
HORVU3Hr1G002220.1	Barley	plasma membrane	33.43	35.29
Os01t0113350-00	Rice	plasma membrane, vacuole	34.64	35.28
VIT_12s0028g01280.t01	Wine grape	plasma membrane	45.63	35.19
VIT_12s0028g01530.t01	Wine grape	plasma membrane	44.58	35.15
Zm00001d053087_P001	Maize	plasma membrane	34.49	35.07
TraesCSU01G045400.1	Wheat	plasma membrane	33.73	35.05
HORVU6Hr1G092620.1	Barley	plasma membrane	42.17	35.0
Os04t0303100-00	Rice	plasma membrane	43.98	34.97
OQU86484	Sorghum	cytosol	10.99	34.93
OQU86485	Sorghum	plasma membrane	32.68	34.83
EES15335	Sorghum	plasma membrane	44.43	34.83
TraesCS2B01G290100.3	Wheat	plasma membrane	43.98	34.8
TraesCS1A01G017200.1	Wheat	plasma membrane	43.52	34.78
HORVU3Hr1G012100.2	Barley	plasma membrane	33.58	34.74
TraesCS5D01G018800.1	Wheat	cytosol	33.58	34.57
TraesCS3D01G012900.1	Wheat	plasma membrane	33.73	34.57
HORVU5Hr1G001800.2	Barley	cytosol	35.84	34.54
Zm00001d025065_P001	Maize	cytosol	37.35	34.49
Os01t0113650-00	Rice	mitochondrion, plasma membrane	34.04	34.45
EES00096	Sorghum	plasma membrane	44.88	34.37
Zm00001d016223_P001	Maize	endoplasmic reticulum, plasma membrane	42.02	34.23
EER88498	Sorghum	plasma membrane	43.22	34.17
TraesCS7D01G368100.1	Wheat	plasma membrane	43.22	34.13
TraesCS3A01G016300.1	Wheat	plasma membrane	32.83	34.12
TraesCSU01G171900.1	Wheat	plasma membrane	42.02	34.11
TraesCS6D01G386200.1	Wheat	plasma membrane	41.72	34.07
HORVU7Hr1G089080.11	Barley	plasma membrane	42.92	34.01
KXG29880	Sorghum	plasma membrane	42.77	33.85
VIT_11s0016g04840.t01	Wine grape	plasma membrane	22.89	33.78
HORVU5Hr1G000910.1	Barley	endoplasmic reticulum, plasma membrane	40.21	33.42
TraesCS6B01G444600.1	Wheat	plasma membrane	41.42	33.37
Zm00001d008891_P001	Maize	plasma membrane	44.13	33.11
Os02t0234450-00	Rice	plasma membrane	41.57	33.01
TraesCS2B01G449900.1	Wheat	extracellular, plasma membrane	41.57	33.01
HORVU2Hr1G100250.10	Barley	plasma membrane	41.27	32.93
TraesCS2D01G427100.1	Wheat	extracellular, plasma membrane	41.27	32.93
TraesCS2A01G429400.1	Wheat	plasma membrane	41.42	32.89
TraesCS5D01G469700.1	Wheat	plasma membrane	43.37	32.73
KXG37964	Sorghum	endoplasmic reticulum, golgi, vacuole	39.76	32.67
TraesCS2D01G419700.1	Wheat	cytosol	32.53	32.58
KXG27741	Sorghum	endoplasmic reticulum, extracellular, plasma membrane	38.4	32.57
HORVU2Hr1G124190.2	Barley	endoplasmic reticulum, plasma membrane	38.7	32.29
HORVU2Hr1G124250.1	Barley	endoplasmic reticulum, plasma membrane	38.7	32.29
TraesCS2A01G580900.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	38.4	32.12
OQU80090	Sorghum	plasma membrane	37.8	31.93
HORVU3Hr1G012080.10	Barley	plastid	23.8	31.23
HORVU2Hr1G066280.1	Barley	plasma membrane	37.8	30.17
VIT_04s0008g05500.t01	Wine grape	cytosol, nucleus, plasma membrane	34.79	29.24
VIT_18s0086g00200.t01	Wine grape	cytosol	26.96	28.92
HORVU3Hr1G012050.1	Barley	plasma membrane	17.47	28.09
TraesCS3B01G075300.1	Wheat	plasma membrane	16.72	26.75
VIT_11s0016g05440.t01	Wine grape	plasma membrane	31.93	26.11
VIT_16s0050g01920.t01	Wine grape	cytosol, mitochondrion, nucleus, plastid	28.77	25.6
VIT_16s0050g01880.t01	Wine grape	plasma membrane	32.83	25.44
TraesCS2D01G591000.1	Wheat	plasma membrane	21.84	25.09
VIT_12s0028g01270.t01	Wine grape	plasma membrane	46.54	25.06
VIT_18s0086g00210.t01	Wine grape	plasma membrane	31.33	24.5
VIT_12s0028g01520.t01	Wine grape	plasma membrane	46.23	23.24
VIT_09s0002g06830.t01	Wine grape	plasma membrane	30.87	22.88
TraesCS3D01G062900.1	Wheat	extracellular, plasma membrane, vacuole	12.35	21.69
VIT_18s0001g03390.t01	Wine grape	plastid	25.9	20.26
TraesCS6A01G402100.1	Wheat	plasma membrane	40.81	16.2

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100267773	wikigene:100267773	Gene3D:2.90.10.10	Gene3D:3.30.200.20	MapMan:50.2.7
InterPro:Bulb-type_lectin_dom	InterPro:Bulb-type_lectin_dom_sf	ProteinID:CCB47404	ProteinID:CCB47404.1	UniProt:F6H536	EMBL:FN595235
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001480	InterPro:IPR036426	InterPro:Kinase-like_dom_sf
EntrezGene:LOC100267773	wikigene:LOC100267773	PFAM:PF00069	PFAM:PF01453	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PFscan:PS50927	PANTHER:PTHR27002	PANTHER:PTHR27002:SF358	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00108	SMART:SM00220	SUPFAM:SSF51110	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	TIGR:TC52398
TMHMM:TMhelix	UniParc:UPI000210980E	ArrayExpress:VIT_12s0028g01640	EnsemblPlantsGene:VIT_12s0028g01640	EnsemblPlants:VIT_12s0028g01640.t01	unigene:Vvi.6102
RefSeq:XP_002277429	RefSeq:XP_002277429.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr12:+:2319670..2321872

Molecular Weight (calculated)

73897.4 Da

IEP (calculated)

5.815

GRAVY (calculated)

-0.224

Length

664 amino acids

Sequence
(BLAST)

001: MDGWQMRVLL VYPKDPRFYC GFFCTGTCES YFFSVVRVVG GNASLIWSAN GRRPVQKNAV VQLTNGGLSL RDSNGTKVWS SNTTGNSIVG MNLTEAGKLV
101: LFNNEGTGLW QSTIQNQTNT TSTNTTSQND YCSSGDGLCS EGLCSCPVGV DGIEYFKQNQ SQFAEVGCSR INPLSCNSPL GQQQLVEVRN FTYLSINETT
201: EAFPNIKDME GCKQTCLQNC SCGGAFFRYD SDASDGYCFM PSRILVIREG QTANYTFTST SFIKVQIPSL APSPFPTEPE IVPPPRPKGN NFAAIAAGSG
301: AGAFLLVCFL IFILSMKLRK SKEEEEEGGD AYTNQVQVPG MPVRFSYEDL RRATEEFKER LGRGGFGSVF KGMLPDGTKI AVKRLDKMGP GMREFLAEVE
401: TIGSIHHFNL VRLIGFCAEK SKRLLVYEYM SNGSLDNWIF YGSQGPCLDW QTRKKIILDI AKGLAYLHED CRQTIVHLDI KPQNILLDEN FNAKVSDFGL
501: SKLIDKDESQ VLITMRGTPG YLAPEWRESR ITVKVDIYSF GIVLLEIVTG RRNFDRTRAE SSSHILGLLQ KKGEEERLLD IVEILDEDMN NREEVERMIK
601: IAAWCLQDDH TRRPPMSVVV KVLEGVMEVD SNIIYKFVHA MGPPAVVNDR VSTAVEASVL SNPR

Best Arabidopsis Sequence Match ( AT2G19130.1 )
(BLAST)

001: MVSFLTLTSF FFICFFIHGS SAVDTISGDF TLSGDQTIVS SDGTYEMGFF KPGSSSNFYI GMWYKQLSQT ILWVANRDKA VSDKNSSVFK ISNGNLILLD
101: GNYQTPVWST GLNSTSSVSA LEAVLQDDGN LVLRTGGSSL SANVLWQSFD HPGDTWLPGV KIRLDKRTGK SQRLTSWKSL EDPSPGLFSL ELDESTAYKI
201: LWNGSNEYWS SGPWNPQSRI FDSVPEMRLN YIYNFSFFSN TTDSYFTYSI YNQLNVSRFV MDVSGQIKQF TWLEGNKAWN LFWSQPRQQC QVYRYCGSFG
301: ICSDKSEPFC RCPQGFRPMS QKDWDLKDYS AGCVRKTELQ CSRGDINQFF RLPNMKLADN SEVLTRTSLS ICASACQGDC SCKAYAYDEG SSKCLVWSKD
401: VLNLQQLEDE NSEGNIFYLR LAASDVPNVG ASGKSNNKGL IFGAVLGSLG VIVLVLLVVI LILRYRRRKR MRGEKGDGTL SAFSYRELQN ATKNFSDKLG
501: GGGFGSVFKG ALPDSSDIAV KRLEGISQGE KQFRTEVVTI GTIQHVNLVR LRGFCSEGSK KLLVYDYMPN GSLDSHLFLN QVEEKIVLGW KLRFQIALGT
601: ARGLAYLHDE CRDCIIHCDI KPENILLDSQ FCPKVADFGL AKLVGRDFSR VLTTMRGTRG YLAPEWISGV AITAKADVYS YGMMLFELVS GRRNTEQSEN
701: EKVRFFPSWA ATILTKDGDI RSLVDPRLEG DAVDIEEVTR ACKVACWCIQ DEESHRPAMS QVVQILEGVL EVNPPPFPRS IQALVVSDED VVFFTESSSS
801: SSHNSSQNHK HSSSSSSSKK MTNDNSSA

Arabidopsis Description

G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130 [Source:UniProtKB/Swiss-Prot;Acc:O64477]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.