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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 9
  • golgi 5
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, secretory
BaCelLo:secretory
EpiLoc:plasma membrane
iPSORT:secretory
MultiLoc:plasma membrane
Plant-mPloc:nucleus
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS7B01G273000.1 Wheat plastid 35.36 73.51
TraesCS7A01G354700.1 Wheat plastid 60.48 71.55
HORVU7Hr1G089080.11 Barley plasma membrane 71.19 71.36
TraesCS7D01G368100.1 Wheat plasma membrane 70.48 70.39
VIT_08s0032g00830.t01 Wine grape cytosol 7.38 60.78
Solyc07g055430.1.1 Tomato cytosol 8.33 57.85
Solyc07g055410.1.1 Tomato cytosol 5.48 56.79
Solyc07g055420.1.1 Tomato cytosol 14.4 55.5
Solyc07g055580.1.1 Tomato plasma membrane 19.17 54.76
PGSC0003DMT400044735 Potato cytosol 11.43 54.55
Solyc07g055670.1.1 Tomato cytosol 15.36 54.43
Solyc07g055400.1.1 Tomato cytosol 14.76 52.77
Solyc07g055630.2.1 Tomato cytosol 19.29 51.1
GSMUA_Achr6P05560_001 Banana plasma membrane 32.14 50.75
Solyc07g055650.1.1 Tomato cytosol, plasma membrane, plastid 24.17 48.33
VIT_12s0028g01450.t01 Wine grape plasma membrane 23.45 46.9
EES14230 Sorghum plasma membrane 43.1 45.53
EES15335 Sorghum plasma membrane 45.48 45.1
PGSC0003DMT400044522 Potato cytosol, nucleus, plasma membrane 38.33 44.23
KXG37964 Sorghum endoplasmic reticulum, golgi, vacuole 42.5 44.18
OQU80090 Sorghum plasma membrane 41.31 44.15
EES00096 Sorghum plasma membrane 45.0 43.6
OQU86484 Sorghum cytosol 10.83 43.54
PGSC0003DMT400044673 Potato plasma membrane 43.1 43.51
VIT_08s0032g00810.t01 Wine grape cytosol 9.29 43.33
VIT_12s0028g01640.t01 Wine grape plasma membrane 34.17 43.22
KXG27741 Sorghum endoplasmic reticulum, extracellular, plasma membrane 40.0 42.91
PGSC0003DMT400044506 Potato plasma membrane 27.38 42.51
KXG29880 Sorghum plasma membrane 42.38 42.43
GSMUA_Achr6P05570_001 Banana mitochondrion, plastid 29.64 42.35
Solyc07g055570.1.1 Tomato cytosol 9.17 42.31
VIT_12s0028g01460.t01 Wine grape plasma membrane 38.93 42.08
VIT_12s0028g01430.t01 Wine grape plasma membrane 39.76 41.8
PGSC0003DMT400073253 Potato plasma membrane 40.95 41.3
PGSC0003DMT400044620 Potato cytosol 25.24 41.16
PGSC0003DMT400044668 Potato plasma membrane 41.07 40.97
VIT_12s0028g01530.t01 Wine grape plasma membrane 41.07 40.97
Solyc02g072070.2.1 Tomato plasma membrane 38.57 40.81
PGSC0003DMT400044608 Potato plasma membrane 40.48 40.43
VIT_12s0028g01650.t01 Wine grape plasma membrane 40.48 40.38
VIT_12s0028g01280.t01 Wine grape plasma membrane 41.19 40.19
PGSC0003DMT400044503 Potato extracellular, plasma membrane, vacuole 38.93 39.64
PGSC0003DMT400044528 Potato plasma membrane 39.64 39.36
PGSC0003DMT400044515 Potato plasma membrane 38.93 39.16
PGSC0003DMT400096753 Potato plasma membrane 38.81 39.14
OQU86485 Sorghum plasma membrane 28.21 38.04
EES03148 Sorghum plasma membrane 27.14 37.81
VIT_12s0028g01630.t01 Wine grape plastid 39.52 37.14
KXG19268 Sorghum plasma membrane 17.98 33.19
OQU76372 Sorghum plasma membrane 31.67 31.74
OQU90662 Sorghum plasma membrane 29.29 28.87
EES07585 Sorghum plasma membrane 29.88 28.39
VIT_12s0028g01270.t01 Wine grape plasma membrane 41.67 28.39
EES01170 Sorghum plasma membrane, plastid 16.55 27.52
EER96846 Sorghum plasma membrane 29.4 27.32
VIT_12s0028g01520.t01 Wine grape plasma membrane 42.14 26.8
EES17510 Sorghum mitochondrion, plasma membrane 29.17 26.49
Solyc07g055640.1.1 Tomato cytosol 23.21 23.75
OQU79589 Sorghum plasma membrane 16.67 22.36
Protein Annotations
KEGG:04150+2.7.11.1KEGG:04151+2.7.11.1KEGG:04714+2.7.11.1KEGG:04926+2.7.11.1KEGG:05165+2.7.11.1Gene3D:1.10.510.10
MapMan:18.4.1.24.2Gene3D:2.90.10.10Gene3D:3.30.200.20InterPro:Bulb-type_lectin_domInterPro:Bulb-type_lectin_dom_sfUniProt:C5Z4I0
EnsemblPlants:EER88498ProteinID:EER88498ProteinID:EER88498.1GO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0004672GO:GO:0004674GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0005623
GO:GO:0005886GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0016020GO:GO:0016021GO:GO:0016301GO:GO:0016310GO:GO:0016740GO:GO:0019538
InterPro:IPR000719InterPro:IPR001480InterPro:IPR036426InterPro:Kinase-like_dom_sfPFAM:PF00069PFAM:PF01453
PIRSF:PIRSF000641ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PFscan:PS50927PANTHER:PTHR27002
PANTHER:PTHR27002:SF178InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSInterPro:Quinoprotein_ADH-like_supfamSMART:SM00108SMART:SM00220
EnsemblPlantsGene:SORBI_3010G163800InterPro:SRK-like_kinaseSUPFAM:SSF50998SUPFAM:SSF51110SUPFAM:SSF56112InterPro:Ser/Thr_kinase_AS
SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0001A891B5RefSeq:XP_002437131.1SEG:seg:
Description
hypothetical protein
Coordinates
chr10:+:48215148..48222770
Molecular Weight (calculated)
93020.2 Da
IEP (calculated)
6.855
GRAVY (calculated)
0.057
Length
840 amino acids
Sequence
(BLAST)
001: MCHSKLLLLL FSLLITICSK LANPAMTKSF LANAELGTIW KNNPSVLHNG FPDDNFSVRL ILPSPYGTAR ISVGSSVDSV PLFACGFFCA GLAATCDAYI
101: FSIFIVNAFS IGDVLYLESP QVVWSANHDR PVKENATVQL TELGDLVLYD ADGTLVWSTN TTGKSVVGMN LTGSGNLVLL DHRNMEVWRS FDHPTNTLVT
201: GQVLHLGQKL IASTSATNWA KGKFYLTVLS NGMYAFAGVD TPLAYYRSPT GGNIIANTSA YIALKNGSLE VFTSFRGTEG PDYLIQFPMN AYGLEFVRLD
301: WDGHLRLYQG GNGSWVSSDL LDIADPCSYP LACGEYGVCS NGQCSCPDAG LRQSGLFKLI NPREINRGCV LTDSLSCGSA HKTRFLAVAN TTRFKIIYNW
401: TTNEEHCKVS CLNDCSCKVA FFLHSNSSSG FCFLASDIFS MISISAQSYS RNFSSYAFIK VQEHKPMLSK GKIAIVVVCS STFVASVIVS MLIVIRRRSA
501: KLLQDRDIID QLPGLPKRFC FESLKSATGD FSRRIGVGGS GSVFEGHIGD KKVAVKRLDG INQGEMEFLM EVQTIGSINH IHLVNLVGFC AEKSHRLLVY
601: EYMPNGSLDK WIFAKHQVGP LDWKTRLKII TDVARGLAYL HSDCRQTIAH LDIKPQNILL DEMFAAKVSD FGLAKLIDRE QSTVMTRLRG TPGYLAPEWL
701: TSIITEKVDV YSFGIVIMEI LCGRRNLDYS QPEESQHLIS MLQERAKGNQ LMNLIDPRST DMEFHIDEVL HTMNLAMWCL QVDSNRRPSM SMVVKILEGT
801: MSVETELDLD LVNIDLMMAN RTSRWDDVTT QVESILTGPR
Best Arabidopsis Sequence Match ( AT1G34300.1 )
(BLAST)
001: MAVKTPFLKL LPLLLLLLHF PFSFSTIPLG SVIYASGSNQ NWPSPNSTFS VSFVPSPSPN SFLAAVSFAG SVPIWSAGTV DSRGSLRLHT SGSLRLTNGS
101: GTTVWDSKTD RLGVTSGSIE DTGEFILLNN RSVPVWSSFD NPTDTIVQSQ NFTAGKILRS GLYSFQLERS GNLTLRWNTS AIYWNHGLNS SFSSNLSSPR
201: LSLQTNGVVS IFESNLLGGA EIVYSGDYGD SNTFRFLKLD DDGNLRIYSS ASRNSGPVNA HWSAVDQCLV YGYCGNFGIC SYNDTNPICS CPSRNFDFVD
301: VNDRRKGCKR KVELSDCSGN TTMLDLVHTR LFTYEDDPNS ESFFAGSSPC RANCLSSVLC LASVSMSDGS GNCWQKHPGS FFTGYQWPSV PSTSYVKVCG
401: PVVANTLERA TKGDDNNSKV HLWIVAVAVI AGLLGLVAVE IGLWWCCCRK NPRFGTLSSH YTLLEYASGA PVQFTYKELQ RCTKSFKEKL GAGGFGTVYR
501: GVLTNRTVVA VKQLEGIEQG EKQFRMEVAT ISSTHHLNLV RLIGFCSQGR HRLLVYEFMR NGSLDNFLFT TDSAKFLTWE YRFNIALGTA KGITYLHEEC
601: RDCIVHCDIK PENILVDDNF AAKVSDFGLA KLLNPKDNRY NMSSVRGTRG YLAPEWLANL PITSKSDVYS YGMVLLELVS GKRNFDVSEK TNHKKFSIWA
701: YEEFEKGNTK AILDTRLSED QTVDMEQVMR MVKTSFWCIQ EQPLQRPTMG KVVQMLEGIT EIKNPLCPKT ISEVSFSGNS MSTSHASMFV ASGPTRSSSF
801: SATRSFQTMG ITSSGPASTR ISEGSMLGS
Arabidopsis Description
G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300 [Source:UniProtKB/Swiss-Prot;Acc:Q9XID3]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.