Factsheet for GSMUA_Achr6P05560_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 7
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc07g055410.1.1	Tomato	cytosol	10.15	66.67
Solyc07g055420.1.1	Tomato	cytosol	22.37	54.59
VIT_08s0032g00810.t01	Wine grape	cytosol	16.92	50.0
Solyc07g055670.1.1	Tomato	cytosol	19.55	43.88
TraesCS7B01G273000.1	Wheat	plastid	32.71	43.07
VIT_12s0028g01450.t01	Wine grape	plasma membrane	32.89	41.67
Solyc07g055580.1.1	Tomato	plasma membrane	22.37	40.48
Solyc07g055630.2.1	Tomato	cytosol	24.06	40.38
Solyc07g055650.1.1	Tomato	cytosol, plasma membrane, plastid	31.39	39.76
GSMUA_Achr6P05570_001	Banana	mitochondrion, plastid	43.61	39.46
Solyc07g055400.1.1	Tomato	cytosol	17.11	38.72
PGSC0003DMT400044735	Potato	cytosol	12.03	36.36
Solyc07g055570.1.1	Tomato	cytosol	12.03	35.16
TraesCS4A01G026200.1	Wheat	cytosol, nucleus, plasma membrane	47.18	34.96
PGSC0003DMT400044506	Potato	plasma membrane	34.02	33.46
PGSC0003DMT400044620	Potato	cytosol	32.33	33.4
Zm00001d025065_P001	Maize	cytosol	44.92	33.24
TraesCS7A01G354700.1	Wheat	plastid	43.8	32.82
PGSC0003DMT400044673	Potato	plasma membrane	50.75	32.45
Solyc07g055430.1.1	Tomato	cytosol	7.33	32.23
EER88498	Sorghum	plasma membrane	50.75	32.14
TraesCS7D01G368100.1	Wheat	plasma membrane	50.56	31.99
HORVU5Hr1G000910.1	Barley	endoplasmic reticulum, plasma membrane	47.93	31.91
HORVU7Hr1G089080.11	Barley	plasma membrane	50.19	31.86
KXG27741	Sorghum	endoplasmic reticulum, extracellular, plasma membrane	46.8	31.8
VIT_12s0028g01430.t01	Wine grape	plasma membrane	47.74	31.79
VIT_12s0028g01640.t01	Wine grape	plasma membrane	39.66	31.78
HORVU2Hr1G124250.1	Barley	endoplasmic reticulum, plasma membrane	46.99	31.41
HORVU2Hr1G124190.2	Barley	endoplasmic reticulum, plasma membrane	46.99	31.41
PGSC0003DMT400044522	Potato	cytosol, nucleus, plasma membrane	42.86	31.32
KXG37964	Sorghum	endoplasmic reticulum, golgi, vacuole	47.56	31.31
VIT_12s0028g01460.t01	Wine grape	plasma membrane	45.68	31.27
VIT_12s0028g01530.t01	Wine grape	plasma membrane	49.44	31.24
TraesCS2A01G580900.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	45.86	30.73
OQU80090	Sorghum	plasma membrane	44.55	30.15
VIT_12s0028g01650.t01	Wine grape	plasma membrane	46.62	29.45
PGSC0003DMT400073253	Potato	plasma membrane	45.86	29.29
PGSC0003DMT400096753	Potato	plasma membrane	44.74	28.57
PGSC0003DMT400044515	Potato	plasma membrane	44.55	28.38
PGSC0003DMT400044668	Potato	plasma membrane	44.74	28.27
VIT_12s0028g01280.t01	Wine grape	plasma membrane	45.68	28.22
Solyc02g072070.2.1	Tomato	plasma membrane	42.11	28.21
VIT_12s0028g01630.t01	Wine grape	plastid	47.37	28.19
PGSC0003DMT400044608	Potato	plasma membrane	43.98	27.82
GSMUA_Achr7P10190_001	Banana	plasma membrane	35.71	27.7
PGSC0003DMT400044528	Potato	plasma membrane	43.98	27.66
PGSC0003DMT400044503	Potato	extracellular, plasma membrane, vacuole	42.29	27.27
TraesCS2D01G591000.1	Wheat	plasma membrane	29.51	27.16
VIT_08s0032g00830.t01	Wine grape	cytosol	4.89	25.49
GSMUA_Achr4P02510_001	Banana	plasma membrane	31.77	23.28
GSMUA_Achr2P14690_001	Banana	plasma membrane	29.89	22.94
GSMUA_Achr9P29120_001	Banana	plasma membrane	29.89	22.43
GSMUA_Achr10P...	Banana	plasma membrane	28.38	21.85
GSMUA_Achr9P27140_001	Banana	plastid	29.51	20.58
GSMUA_AchrUn_...	Banana	plasma membrane	13.72	20.28
VIT_12s0028g01270.t01	Wine grape	plasma membrane	46.99	20.28
Solyc07g055640.1.1	Tomato	cytosol	31.2	20.22
VIT_12s0028g01520.t01	Wine grape	plasma membrane	49.81	20.06
GSMUA_Achr5P09860_001	Banana	plasma membrane	19.74	16.56
GSMUA_Achr5P06120_001	Banana	cytosol, plasma membrane, vacuole	21.8	13.65

Protein Annotations

Gene3D:1.10.510.10	Gene3D:2.90.10.10	Gene3D:3.30.200.20	MapMan:50.2.7	InterPro:Bulb-type_lectin_dom	InterPro:Bulb-type_lectin_dom_sf
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr6G05560_001	EnsemblPlants:GSMUA_Achr6P05560_001	EnsemblPlants:GSMUA_Achr6T05560_001	InterPro:IPR000719
InterPro:IPR001480	InterPro:IPR036426	InterPro:Kinase-like_dom_sf	UniProt:M0T4F4	PFAM:PF00069	PFAM:PF01453
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50927	PANTHER:PTHR27002	PANTHER:PTHR27002:SF178
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF51110	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
SignalP:SignalP-noTM	UniParc:UPI000294908F	SEG:seg	:	:	:

Description

Putative D-mannose binding lectin family protein [Source:GMGC_GENE;Acc:GSMUA_Achr6G05560_001]

Coordinates

chr6:+:3749825..3753147

Molecular Weight (calculated)

59479.0 Da

IEP (calculated)

6.462

GRAVY (calculated)

-0.246

Length

532 amino acids

Sequence
(BLAST)

001: MLSAGHHLLL LLLLAIPPLL RAQLDYPSAN LSTIWTNDPS QLSHTVVWSA NRDRPVGANA TLHFTAGGDL VLHDANGTTL VWQSFDHPTD SLLLGQTLKE
101: GQRLVANTSM TNWTRGQVYL TISSNKATKN STHIKYLNGS LVALSTESNN SDQMISLPSA PSLQFLRFDC PSGANVSSIY FQSVDDRQSG LGCFPVTPLS
201: CQSMQQHSLL AADNVSYFNY IDRGIIIVFV RRRKSTEEEE DDFQQVPGMP TRFAFEELKL ATDSFSKKLG QGGFGSVYEG KIGDEKIAVK QLDGVGQGKR
301: EFLAEVEIIG SVHHINLVRL IGFCAERSHR LLVYEYMCNG SLDRWIFSKG QRGTLDWQTK CKIVADIAKG LSYLHEECRQ RIAHLDIKPQ NILLDEKFNA
401: KVSDFGLSKL IDRDQEEVDI YSFGVMIVEI VYMIKSNRLE DIIDSRSDEM KLHKKEAVEM IKLAVWCLQG DSNRRPSMST VVKVLEGARN VETDLDYNFF
501: MNTSIMPKNG DHYDHHLDAS PAPSASLLSG PR

Best Arabidopsis Sequence Match ( AT1G34300.1 )
(BLAST)

001: MAVKTPFLKL LPLLLLLLHF PFSFSTIPLG SVIYASGSNQ NWPSPNSTFS VSFVPSPSPN SFLAAVSFAG SVPIWSAGTV DSRGSLRLHT SGSLRLTNGS
101: GTTVWDSKTD RLGVTSGSIE DTGEFILLNN RSVPVWSSFD NPTDTIVQSQ NFTAGKILRS GLYSFQLERS GNLTLRWNTS AIYWNHGLNS SFSSNLSSPR
201: LSLQTNGVVS IFESNLLGGA EIVYSGDYGD SNTFRFLKLD DDGNLRIYSS ASRNSGPVNA HWSAVDQCLV YGYCGNFGIC SYNDTNPICS CPSRNFDFVD
301: VNDRRKGCKR KVELSDCSGN TTMLDLVHTR LFTYEDDPNS ESFFAGSSPC RANCLSSVLC LASVSMSDGS GNCWQKHPGS FFTGYQWPSV PSTSYVKVCG
401: PVVANTLERA TKGDDNNSKV HLWIVAVAVI AGLLGLVAVE IGLWWCCCRK NPRFGTLSSH YTLLEYASGA PVQFTYKELQ RCTKSFKEKL GAGGFGTVYR
501: GVLTNRTVVA VKQLEGIEQG EKQFRMEVAT ISSTHHLNLV RLIGFCSQGR HRLLVYEFMR NGSLDNFLFT TDSAKFLTWE YRFNIALGTA KGITYLHEEC
601: RDCIVHCDIK PENILVDDNF AAKVSDFGLA KLLNPKDNRY NMSSVRGTRG YLAPEWLANL PITSKSDVYS YGMVLLELVS GKRNFDVSEK TNHKKFSIWA
701: YEEFEKGNTK AILDTRLSED QTVDMEQVMR MVKTSFWCIQ EQPLQRPTMG KVVQMLEGIT EIKNPLCPKT ISEVSFSGNS MSTSHASMFV ASGPTRSSSF
801: SATRSFQTMG ITSSGPASTR ISEGSMLGS

Arabidopsis Description

G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300 [Source:UniProtKB/Swiss-Prot;Acc:Q9XID3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.