Factsheet for VIT_12s0028g01520.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
plasma membrane 8
extracellular 4
golgi 4
endoplasmic reticulum 4
vacuole 4
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	plastid
EpiLoc:	plasma membrane
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_08s0032g00830.t01	Wine grape	cytosol	5.75	74.51
VIT_12s0028g01430.t01	Wine grape	plasma membrane	43.0	71.09
VIT_12s0028g01530.t01	Wine grape	plasma membrane	45.27	71.02
Solyc07g055430.1.1	Tomato	cytosol	6.21	67.77
Solyc07g055410.1.1	Tomato	cytosol	4.09	66.67
PGSC0003DMT400044735	Potato	cytosol	8.48	63.64
Solyc07g055580.1.1	Tomato	plasma membrane	14.0	62.93
Solyc07g055630.2.1	Tomato	cytosol	15.06	62.78
HORVU3Hr1G002240.1	Barley	cytosol	11.66	62.6
Solyc07g055400.1.1	Tomato	cytosol	11.13	62.55
Solyc07g055420.1.1	Tomato	cytosol	10.3	62.39
VIT_12s0028g01450.t01	Wine grape	plasma membrane	19.53	61.43
VIT_08s0032g00810.t01	Wine grape	cytosol	8.1	59.44
Solyc07g055570.1.1	Tomato	cytosol	8.02	58.24
TraesCS3A01G015300.1	Wheat	cytosol	14.53	56.3
TraesCS3A01G063800.1	Wheat	cytosol	7.57	56.18
Solyc07g055650.1.1	Tomato	cytosol, plasma membrane, plastid	17.79	55.95
TraesCS3A01G014700.1	Wheat	cytosol	13.85	54.95
VIT_12s0028g01490.t01	Wine grape	cytosol	4.54	54.55
VIT_12s0028g01460.t01	Wine grape	plasma membrane	31.95	54.31
PGSC0003DMT400044522	Potato	cytosol, nucleus, plasma membrane	29.9	54.26
HORVU2Hr1G098980.1	Barley	cytosol, mitochondrion	4.92	53.72
PGSC0003DMT400044620	Potato	cytosol	20.74	53.2
PGSC0003DMT400044506	Potato	plasma membrane	21.73	53.05
VIT_12s0028g01280.t01	Wine grape	plasma membrane	33.91	52.03
TraesCSU01G045500.1	Wheat	plasma membrane	14.84	51.04
TraesCS5A01G458600.1	Wheat	nucleus, plasma membrane, plastid	16.28	50.59
PGSC0003DMT400044515	Potato	plasma membrane	31.87	50.42
TraesCS6D01G386500.1	Wheat	cytosol	20.29	50.38
TraesCS6B01G444200.1	Wheat	cytosol	19.68	50.29
PGSC0003DMT400044608	Potato	plasma membrane	31.72	49.82
GSMUA_Achr6P05560_001	Banana	plasma membrane	20.06	49.81
TraesCS7B01G273000.1	Wheat	plastid	15.22	49.75
PGSC0003DMT400096753	Potato	plasma membrane	31.34	49.7
PGSC0003DMT400044668	Potato	plasma membrane	31.64	49.64
PGSC0003DMT400044503	Potato	extracellular, plasma membrane, vacuole	30.36	48.61
PGSC0003DMT400044528	Potato	plasma membrane	31.04	48.46
HORVU3Hr1G002230.1	Barley	plasma membrane	5.9	48.45
HORVU1Hr1G005720.5	Barley	cytosol, plasma membrane	28.01	48.05
TraesCS6B01G445200.1	Wheat	cytosol	23.39	47.98
TraesCS1D01G014300.1	Wheat	plasma membrane	23.85	47.58
TraesCS3D01G013600.1	Wheat	plastid	14.99	46.92
Os04t0303100-00	Rice	plasma membrane	29.3	46.35
TraesCS5B01G468100.1	Wheat	nucleus	20.44	46.31
VIT_12s0028g01640.t01	Wine grape	plasma membrane	23.24	46.23
TraesCS5D01G018800.1	Wheat	cytosol	22.33	45.74
TraesCS6B01G444600.1	Wheat	plasma membrane	28.46	45.63
TraesCSU01G171900.1	Wheat	plasma membrane	28.24	45.6
TraesCS2B01G290100.3	Wheat	plasma membrane	28.92	45.53
HORVU6Hr1G092620.1	Barley	plasma membrane	27.48	45.38
TraesCS2A01G271900.1	Wheat	plasma membrane	26.95	45.29
TraesCS6D01G386200.1	Wheat	plasma membrane	27.78	45.14
EES15335	Sorghum	plasma membrane	28.92	45.1
EES14230	Sorghum	plasma membrane	27.02	44.91
GSMUA_Achr6P05570_001	Banana	mitochondrion, plastid	19.98	44.9
TraesCS3A01G016100.1	Wheat	cytosol	4.16	44.72
TraesCSU01G045100.1	Wheat	cytosol	4.16	44.72
TraesCSU01G166600.1	Wheat	cytosol	4.16	44.72
HORVU5Hr1G001800.2	Barley	cytosol	23.32	44.7
TraesCS7A01G354700.1	Wheat	plastid	24.0	44.65
TraesCS4A01G026200.1	Wheat	cytosol, nucleus, plasma membrane	24.22	44.57
TraesCS1A01G017200.1	Wheat	plasma membrane	28.01	44.52
TraesCS3A01G015100.1	Wheat	plasma membrane	15.52	43.34
Zm00001d016223_P001	Maize	endoplasmic reticulum, plasma membrane	26.72	43.31
EES00096	Sorghum	plasma membrane	28.39	43.25
TraesCS3D01G012800.1	Wheat	plasma membrane	14.46	43.21
HORVU3Hr1G002210.3	Barley	plasma membrane	15.75	42.89
KXG29880	Sorghum	plasma membrane	27.1	42.67
TraesCS5D01G469700.1	Wheat	plasma membrane	28.31	42.5
TraesCS3B01G079400.1	Wheat	cytosol, plasma membrane, plastid	16.5	42.5
TraesCS3A01G064400.1	Wheat	cytosol	16.35	42.44
KXG27741	Sorghum	endoplasmic reticulum, extracellular, plasma membrane	25.13	42.4
Zm00001d025065_P001	Maize	cytosol	23.01	42.28
OQU80090	Sorghum	plasma membrane	25.13	42.24
Os02t0234450-00	Rice	plasma membrane	26.72	42.22
EER88498	Sorghum	plasma membrane	26.8	42.14
HORVU7Hr1G089080.11	Barley	plasma membrane	26.72	42.12
TraesCS2A01G580900.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	25.28	42.07
HORVU2Hr1G124190.2	Barley	endoplasmic reticulum, plasma membrane	25.21	41.83
HORVU2Hr1G124250.1	Barley	endoplasmic reticulum, plasma membrane	25.21	41.83
HORVU2Hr1G066280.1	Barley	plasma membrane	26.34	41.83
TraesCS7D01G368100.1	Wheat	plasma membrane	26.57	41.74
KXG37964	Sorghum	endoplasmic reticulum, golgi, vacuole	25.28	41.34
HORVU5Hr1G000910.1	Barley	endoplasmic reticulum, plasma membrane	24.98	41.3
TraesCS2A01G429400.1	Wheat	plasma membrane	25.97	41.03
TraesCS2B01G449900.1	Wheat	extracellular, plasma membrane	25.97	41.03
Zm00001d008891_P001	Maize	plasma membrane	27.4	40.9
HORVU2Hr1G100250.10	Barley	plasma membrane	25.66	40.75
TraesCS2D01G427100.1	Wheat	extracellular, plasma membrane	25.66	40.75
TraesCS3D01G064800.1	Wheat	cytosol, plasma membrane, plastid	16.05	40.3
VIT_12s0028g01650.t01	Wine grape	plasma membrane	25.66	40.26
TraesCS3A01G063700.1	Wheat	cytosol, plasma membrane, plastid	16.65	39.57
HORVU6Hr1G092730.1	Barley	plasma membrane	7.19	39.26
OQU86484	Sorghum	cytosol	6.21	39.23
VIT_12s0028g01630.t01	Wine grape	plastid	26.5	39.15
TraesCS2D01G419800.1	Wheat	mitochondrion	18.24	39.12
TraesCS3A01G064300.1	Wheat	cytosol	16.12	38.24
TraesCS3B01G076900.1	Wheat	plasma membrane	18.55	38.16
TraesCS3D01G062500.1	Wheat	plasma membrane	17.79	38.03
EES03148	Sorghum	plasma membrane	17.34	37.98
TraesCS3B01G077000.1	Wheat	plasma membrane	18.32	37.81
TraesCS3D01G063800.1	Wheat	plasma membrane	18.24	37.66
TraesCS3D01G064700.2	Wheat	plasma membrane	18.24	37.48
HORVU3Hr1G002220.1	Barley	plasma membrane	17.79	37.36
OQU86485	Sorghum	plasma membrane	17.56	37.24
HORVU3Hr1G012100.2	Barley	plasma membrane	18.09	37.23
TraesCSU01G045400.1	Wheat	plasma membrane	17.94	37.09
TraesCS3D01G012900.1	Wheat	plasma membrane	18.09	36.88
TraesCS2D01G591000.1	Wheat	plasma membrane	16.12	36.85
VIT_12s0028g01270.t01	Wine grape	plasma membrane	34.22	36.66
TraesCS3A01G016300.1	Wheat	plasma membrane	17.71	36.62
TraesCS3D01G062600.1	Wheat	plasma membrane	17.71	36.22
Os01t0113350-00	Rice	plasma membrane, vacuole	17.71	35.89
Zm00001d053135_P001	Maize	plasma membrane	17.49	35.81
TraesCS2D01G419700.1	Wheat	cytosol	17.71	35.29
Zm00001d053087_P001	Maize	plasma membrane	17.41	35.22
Os01t0113650-00	Rice	mitochondrion, plasma membrane	17.41	35.06
VIT_11s0016g04840.t01	Wine grape	plasma membrane	11.58	34.0
VIT_04s0008g05500.t01	Wine grape	cytosol, nucleus, plasma membrane	20.06	33.54
VIT_18s0086g00200.t01	Wine grape	cytosol	14.61	31.18
HORVU3Hr1G012080.10	Barley	plastid	11.88	31.03
VIT_16s0050g01880.t01	Wine grape	plasma membrane	19.61	30.22
VIT_16s0050g01920.t01	Wine grape	cytosol, mitochondrion, nucleus, plastid	17.03	30.16
VIT_11s0016g05440.t01	Wine grape	plasma membrane	18.32	29.8
HORVU3Hr1G012050.1	Barley	plasma membrane	9.31	29.78
VIT_18s0086g00210.t01	Wine grape	plasma membrane	18.24	28.39
TraesCS3B01G075300.1	Wheat	plasma membrane	8.86	28.19
VIT_09s0002g06830.t01	Wine grape	plasma membrane	19.08	28.12
Solyc07g055640.1.1	Tomato	cytosol	17.18	27.65
TraesCS3D01G062900.1	Wheat	extracellular, plasma membrane, vacuole	6.81	23.81
TraesCS6A01G402100.1	Wheat	plasma membrane	27.4	21.64
VIT_18s0001g03390.t01	Wine grape	plastid	12.94	20.14

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100257381	wikigene:100257381	MapMan:18.4.1.24.2	Gene3D:2.90.10.10	Gene3D:3.30.200.20
InterPro:Bulb-type_lectin_dom	InterPro:Bulb-type_lectin_dom_sf	ProteinID:CCB47411	ProteinID:CCB47411.1	UniProt:F6H543	EMBL:FN595235
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301
GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001480	InterPro:IPR003609
InterPro:IPR036426	InterPro:Kinase-like_dom_sf	EntrezGene:LOC100257381	wikigene:LOC100257381	PFAM:PF00069	PFAM:PF01453
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50927	PFscan:PS50948	PFscan:PS51257
PANTHER:PTHR27002	PANTHER:PTHR27002:SF178	InterPro:Pan_app	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00108
SMART:SM00220	SUPFAM:SSF51110	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	TMHMM:TMhelix
UniParc:UPI0002109812	ArrayExpress:VIT_12s0028g01520	EnsemblPlantsGene:VIT_12s0028g01520	EnsemblPlants:VIT_12s0028g01520.t01	RefSeq:XP_003633280	RefSeq:XP_003633280.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr12:+:2172268..2184432

Molecular Weight (calculated)

147478.0 Da

IEP (calculated)

5.419

GRAVY (calculated)

-0.149

Length

1321 amino acids

Sequence
(BLAST)

0001: MGLYRMESSS VSALLFSLLL ISCFPLTDAQ YIQYPSNANL SSSWTNKIGE VISTNSSEYA VPQPILLRET TGSGFICGFY CYIGSDACFF GVLIFQNMDL
0101: PELVWSANRN NPFRINATST LELTEGGDLT LEDADGTLIW STNTSGKSIA GLNLTEAGNL VLFDQNNNTV WQSFDYPTDC LVPSQKLVSG KELTASVSSS
0201: NWSEGLPSLL VTNEGMVAYV DSSPPQFYYN KTVRGMKNNT EPSYIQFRNE SLALFIPTAA PNDTDSVISI PAALSSQFMK LDPDGHLRVY EWRESEWKEV
0301: ADLLQTNEGN CEYPLSCGKY GICSDEQCSC PGDSSNAAKY FRPVDDRLPN LGCSEITSIS CLSSQYYSLM ELDNYRYSTF REDTVYTDME NCKQACLKNC
0401: SCKGARFLYD WNSSNGNCYL LSEVFSLIRN YGKHEETYVN STVLLKVVDS PIENNTEQVG SKAGKKTGHV PIIIGSSLGA FFGVLILIVT CLFLFRKKNN
0501: TMEVEEDYLD QVSGMPTRFS YGGLKAATEN FSRKLGEGGF GSVYEGTLGN GVKVAVKLLE GLAQVKKSFL AEVETIGSIH HVNLVILIGF CAEKSHRLLV
0601: YEYMCNGSLD RWIFHKNQDL ALGWQSRRKI ILDIAKGLSY LHEECTKKIF HLDIKPQNIL LDEHFNAKVS DFGLSKLIDR DQSQVVTTMR GTPGYLAPEW
0701: LSAVITEKVD VYSFGVVVLE ILCGRKNIDR SRPEEDMHLL SIFKRKAQEE QLLDMVDKHR TEEMQLHGTE VVKMMRVGAW CLQSDFAKRP YMSMVVKALE
0801: GLVDVDENLD YSFSPLPLPG SLTVVGPKEG VASSSTTPLL ASVLSGPSLQ PSLAADNWTE GLLSLSVTNQ ALVAYVLSNP PQFYYRLEGS DIDTKDDPLH
0901: GDCCFLSEVF SLMTTDRGDI KSFTFLKVAI SPIERIREPV GNIIQKKKGH ARVIVVSSLA AFFGVFIFMT TCFFLFRKKK DSIEFEEDYL YQVSGMPTRF
1001: SFQDLKSTTQ NFSCKLGEGG FGSVYEGTLS NGAKVAVKRL EGLAQVKKSF SAEVETIGSI HHVNLVRLMG FCAEKSHRLL VYEYMCNGSL DKWIFHKNQH
1101: LSLGWESRRK IILDIAKGLA YLHEECRQKI FHLDIKPQNI LLDEHFNAKV SDFGLSKLTD KDQSQVVTTM RGTPGYLAPE WLSSVITEKV DVYSFGVVLL
1201: EILCGRRNVD RSQPEEDMHL LGIFRRKANE GQVLDMVDKN SEDMQRHGAD VLELMKVAAW CLQNDYATRP SMSVVVKVLE GLVDVEDDLD YNFSHSPLPR
1301: GIAHKVATAT PIMPSTLTGP R

Best Arabidopsis Sequence Match ( AT1G34300.1 )
(BLAST)

001: MAVKTPFLKL LPLLLLLLHF PFSFSTIPLG SVIYASGSNQ NWPSPNSTFS VSFVPSPSPN SFLAAVSFAG SVPIWSAGTV DSRGSLRLHT SGSLRLTNGS
101: GTTVWDSKTD RLGVTSGSIE DTGEFILLNN RSVPVWSSFD NPTDTIVQSQ NFTAGKILRS GLYSFQLERS GNLTLRWNTS AIYWNHGLNS SFSSNLSSPR
201: LSLQTNGVVS IFESNLLGGA EIVYSGDYGD SNTFRFLKLD DDGNLRIYSS ASRNSGPVNA HWSAVDQCLV YGYCGNFGIC SYNDTNPICS CPSRNFDFVD
301: VNDRRKGCKR KVELSDCSGN TTMLDLVHTR LFTYEDDPNS ESFFAGSSPC RANCLSSVLC LASVSMSDGS GNCWQKHPGS FFTGYQWPSV PSTSYVKVCG
401: PVVANTLERA TKGDDNNSKV HLWIVAVAVI AGLLGLVAVE IGLWWCCCRK NPRFGTLSSH YTLLEYASGA PVQFTYKELQ RCTKSFKEKL GAGGFGTVYR
501: GVLTNRTVVA VKQLEGIEQG EKQFRMEVAT ISSTHHLNLV RLIGFCSQGR HRLLVYEFMR NGSLDNFLFT TDSAKFLTWE YRFNIALGTA KGITYLHEEC
601: RDCIVHCDIK PENILVDDNF AAKVSDFGLA KLLNPKDNRY NMSSVRGTRG YLAPEWLANL PITSKSDVYS YGMVLLELVS GKRNFDVSEK TNHKKFSIWA
701: YEEFEKGNTK AILDTRLSED QTVDMEQVMR MVKTSFWCIQ EQPLQRPTMG KVVQMLEGIT EIKNPLCPKT ISEVSFSGNS MSTSHASMFV ASGPTRSSSF
801: SATRSFQTMG ITSSGPASTR ISEGSMLGS

Arabidopsis Description

G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300 [Source:UniProtKB/Swiss-Prot;Acc:Q9XID3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.