Skip to main content
crop-pal logo
Barley
Search for another protein from :
Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 3
  • endoplasmic reticulum 3
  • vacuole 3
  • plasma membrane 4
  • golgi 3
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
TargetP:secretory
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU3Hr1G002240.1 Barley cytosol 50.72 100.0
HORVU3Hr1G002230.1 Barley plasma membrane 30.31 91.3
TraesCS3A01G014700.1 Wheat cytosol 60.0 87.39
TraesCSU01G045500.1 Wheat plasma membrane 66.19 83.59
TraesCS3D01G013600.1 Wheat plastid 69.28 79.62
TraesCS3A01G015100.1 Wheat plasma membrane 71.96 73.78
HORVU2Hr1G098980.1 Barley cytosol, mitochondrion 18.35 73.55
TraesCS3D01G012800.1 Wheat plasma membrane 65.36 71.72
Solyc07g055410.1.1 Tomato cytosol 10.93 65.43
HORVU6Hr1G092730.1 Barley plasma membrane 29.69 59.5
VIT_08s0032g00830.t01 Wine grape cytosol 12.16 57.84
PGSC0003DMT400044735 Potato cytosol 20.41 56.25
Solyc07g055430.1.1 Tomato cytosol 14.02 56.2
Solyc07g055400.1.1 Tomato cytosol 25.57 52.77
HORVU3Hr1G002220.1 Barley plasma membrane 68.04 52.46
Solyc07g055670.1.1 Tomato cytosol 25.36 51.9
Solyc07g055580.1.1 Tomato plasma membrane 31.13 51.36
HORVU3Hr1G012100.2 Barley plasma membrane 64.12 48.44
VIT_12s0028g01450.t01 Wine grape plasma membrane 40.41 46.67
Solyc07g055570.1.1 Tomato cytosol 17.11 45.6
VIT_08s0032g00810.t01 Wine grape cytosol 16.7 45.0
Solyc07g055630.2.1 Tomato cytosol 28.66 43.85
Solyc07g055650.1.1 Tomato cytosol, plasma membrane, plastid 37.53 43.33
Solyc07g055420.1.1 Tomato cytosol 18.35 40.83
PGSC0003DMT400044620 Potato cytosol 38.35 36.12
HORVU3Hr1G012050.1 Barley plasma membrane 30.72 36.08
HORVU3Hr1G012080.10 Barley plastid 37.53 35.97
PGSC0003DMT400044506 Potato plasma membrane 38.97 34.94
HORVU5Hr1G001800.2 Barley cytosol 42.47 29.9
VIT_12s0028g01640.t01 Wine grape plasma membrane 40.21 29.37
HORVU1Hr1G005720.5 Barley cytosol, plasma membrane 45.57 28.7
HORVU7Hr1G020720.3 Barley plasma membrane 26.6 28.04
HORVU2Hr1G124190.2 Barley endoplasmic reticulum, plasma membrane 45.77 27.89
HORVU2Hr1G124250.1 Barley endoplasmic reticulum, plasma membrane 45.77 27.89
PGSC0003DMT400044522 Potato cytosol, nucleus, plasma membrane 40.62 27.06
VIT_12s0028g01460.t01 Wine grape plasma membrane 42.89 26.77
HORVU6Hr1G092620.1 Barley plasma membrane 44.12 26.75
HORVU5Hr1G000910.1 Barley endoplasmic reticulum, plasma membrane 42.89 26.03
VIT_12s0028g01430.t01 Wine grape plasma membrane 41.65 25.28
Solyc02g072070.2.1 Tomato plasma membrane 40.0 24.43
VIT_12s0028g01530.t01 Wine grape plasma membrane 42.27 24.35
HORVU7Hr1G089080.11 Barley plasma membrane 41.86 24.22
PGSC0003DMT400044673 Potato plasma membrane 41.03 23.92
PGSC0003DMT400073253 Potato plasma membrane 41.03 23.89
PGSC0003DMT400044608 Potato plasma membrane 41.03 23.66
PGSC0003DMT400044515 Potato plasma membrane 40.62 23.59
PGSC0003DMT400096753 Potato plasma membrane 40.41 23.53
PGSC0003DMT400044668 Potato plasma membrane 40.82 23.52
PGSC0003DMT400044503 Potato extracellular, plasma membrane, vacuole 39.59 23.27
PGSC0003DMT400044528 Potato plasma membrane 40.41 23.17
HORVU2Hr1G100250.10 Barley plasma membrane 39.59 23.08
VIT_12s0028g01650.t01 Wine grape plasma membrane 38.76 22.33
HORVU2Hr1G066280.1 Barley plasma membrane 38.14 22.24
VIT_12s0028g01630.t01 Wine grape plastid 40.82 22.15
VIT_12s0028g01280.t01 Wine grape plasma membrane 39.18 22.07
Solyc07g055640.1.1 Tomato cytosol 36.29 21.44
HORVU7Hr1G047150.8 Barley mitochondrion, plasma membrane 35.46 19.82
HORVU6Hr1G080460.1 Barley endoplasmic reticulum, plasma membrane 30.72 16.65
HORVU5Hr1G068070.1 Barley plasma membrane 30.93 16.45
HORVU5Hr1G118460.1 Barley plasma membrane 28.66 16.09
HORVU5Hr1G000240.2 Barley plasma membrane 31.55 16.02
VIT_12s0028g01520.t01 Wine grape plasma membrane 42.89 15.75
VIT_12s0028g01270.t01 Wine grape plasma membrane 39.79 15.65
HORVU2Hr1G106300.1 Barley extracellular 1.86 2.52
HORVU2Hr1G020630.1 Barley cytosol, plastid 1.65 2.25
HORVU5Hr1G118510.1 Barley endoplasmic reticulum, extracellular, vacuole 1.24 1.37
Protein Annotations
Gene3D:1.10.510.10Gene3D:3.30.200.20MapMan:50.2.7UniProt:A0A287JX05GO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0004672GO:GO:0004674GO:GO:0005488GO:GO:0005524GO:GO:0005575
GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016020
GO:GO:0016021GO:GO:0016301GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:HORVU3Hr1G002210EnsemblPlants:HORVU3Hr1G002210.3
InterPro:IPR000719InterPro:Kinase-like_dom_sfPFAM:PF00069ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011
PANTHER:PTHR27002PANTHER:PTHR27002:SF329InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_ASSignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI000B462309SEG:seg:
Description
No Description!
Coordinates
chrchr3H:+:4614810..4628449
Molecular Weight (calculated)
52079.4 Da
IEP (calculated)
9.169
GRAVY (calculated)
-0.208
Length
485 amino acids
Sequence
(BLAST)
001: MAVVSATSAL HLLPLLLLLL PVATIANSTS VGIIIDTNAS RSPTAKRPMP APPAKVTPTA PSDPPASPAT VTPMTPSTLP APIGTTSMKE KPFTARRKTT
101: VSKMKLPTGX XXXXXXXXXX XXXXXTILFL ITYFIRKRRT QQQHLIEEEE EFRNLKGTPM RYTFQQLKSA TEQFKDKLGE GGFGSVFKGE LADQRIAVKR
201: LDRAGQGKRE FSAEVQTIGS IHHINLVRLI GFCAEKSHRL LVYEYMPKGS LDRWIYCRND NDSPPLEWST RCKIITNIAK GLAYLHEECT KKIAHLDVKP
301: QNILLDDDFN AKLSDFGLCK LIDRDMSQVV TKMRGTPGYL APEWLTSQIT EKADVYSFGV VVMEVICGRK NLDTSLSEES IHLITLLEEK VKNAHLVDLI
401: DKNSNDMLAH KQDVIEMMKL AMWCLQIDCK RRPKMSDVVK VLEGTMNAES NIDHNFVATN QVNFGGAANV VSSVPPLASH VSGPR
Best Arabidopsis Sequence Match ( AT4G00340.2 )
(BLAST)
001: MPCTTYLPLL LLLFLLPPPS VQSKVIIKGN QTILSFKAIF RLGFFSTTNG SSNWYLGISY ASMPTPTHVW VANRIRPVSD PDSSTLELTS TGYLIVSNLR
101: DGVVWQTDNK QPGTDFRFSE TGNLILINDD GSPVWQSFDN PTDTWLPGMN VTGLTAMTSW RSLFDPSPGF YSLRLSPSFN EFQLVYKGTT PYWSTGNWTG
201: EAFVGVPEMT IPYIYRFHFV NPYTPTASFW YIVPPLDSVS EPRLTRFMVG ANGQLKQYTW DPQTQSWNMF WLQPEDPCRV YNLCGQLGFC SSELLKPCAC
301: IRGFRPRNDA AWRSDDYSDG CRRENGDSGE KSDTFEAVGD LRYDGDVKMS RLQVSKSSCA KTCLGNSSCV GFYHKEKSNL CKILLESPNN KGNSKGNISK
401: SIIILCSVVG SISVLGFTLL VPLILLKRSR KRKKTRKQDE DGFAVLNLKV FSFKELQSAT NGFSDKVGHG GFGAVFKGTL PGSSTFVAVK RLERPGSGES
501: EFRAEVCTIG NIQHVNLVRL RGFCSENLHR LLVYDYMPQG SLSSYLSRTS PKLLSWETRF RIALGTAKGI AYLHEGCRDC IIHCDIKPEN ILLDSDYNAK
601: VSDFGLAKLL GRDFSRVLAT MRGTWGYVAP EWISGLPITT KADVYSFGMT LLELIGGRRN VIVNSDTLGE KETEPEKWFF PPWAAREIIQ GNVDSVVDSR
701: LNGEYNTEEV TRMATVAIWC IQDNEEIRPA MGTVVKMLEG VVEVTVPPPP KLIQALVSGD SYRGVSGTSC SEGHGCSDLN TGLSSPGSRS SFGRPSP
Arabidopsis Description
RLK4receptor-like protein kinase 4 [Source:TAIR;Acc:AT4G00340]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.