Factsheet for VIT_12s0028g01650.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
nucleus 2
extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 7
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	plastid
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_12s0028g01630.t01	Wine grape	plastid	68.05	64.09
VIT_12s0028g01640.t01	Wine grape	plasma membrane	50.12	63.55
HORVU3Hr1G002240.1	Barley	cytosol	17.34	59.35
TraesCS3A01G014700.1	Wheat	cytosol	21.02	53.15
TraesCS3A01G015300.1	Wheat	cytosol	21.14	52.2
TraesCS3A01G063800.1	Wheat	cytosol	10.93	51.69
VIT_08s0032g00830.t01	Wine grape	cytosol	6.18	50.98
VIT_12s0028g01450.t01	Wine grape	plasma membrane	24.94	50.0
HORVU3Hr1G002230.1	Barley	plasma membrane	9.5	49.69
TraesCSU01G045500.1	Wheat	plasma membrane	21.97	48.18
TraesCS7B01G273000.1	Wheat	plastid	22.68	47.28
TraesCS6B01G444200.1	Wheat	cytosol	28.74	46.81
GSMUA_Achr6P05560_001	Banana	plasma membrane	29.45	46.62
TraesCS5A01G458600.1	Wheat	nucleus, plasma membrane, plastid	23.4	46.35
TraesCS6D01G386500.1	Wheat	cytosol	28.5	45.11
TraesCS3D01G013600.1	Wheat	plastid	22.45	44.79
VIT_12s0028g01460.t01	Wine grape	plasma membrane	40.5	43.89
VIT_08s0032g00810.t01	Wine grape	cytosol	9.26	43.33
TraesCS5B01G468100.1	Wheat	nucleus	29.81	43.05
TraesCS7A01G354700.1	Wheat	plastid	35.63	42.25
TraesCS6B01G445200.1	Wheat	cytosol	32.19	42.08
TraesCS2B01G290100.3	Wheat	plasma membrane	41.92	42.07
EES15335	Sorghum	plasma membrane	42.04	41.79
HORVU1Hr1G005720.5	Barley	cytosol, plasma membrane	38.12	41.69
TraesCSU01G171900.1	Wheat	plasma membrane	40.5	41.69
EES14230	Sorghum	plasma membrane	39.31	41.64
TraesCS3D01G012800.1	Wheat	plasma membrane	21.85	41.63
TraesCS2A01G271900.1	Wheat	plasma membrane	38.72	41.48
TraesCS1D01G014300.1	Wheat	plasma membrane	32.54	41.39
HORVU2Hr1G098980.1	Barley	cytosol, mitochondrion	5.94	41.32
Os04t0303100-00	Rice	plasma membrane	40.97	41.32
TraesCS6B01G444600.1	Wheat	plasma membrane	40.14	41.02
TraesCS5D01G018800.1	Wheat	cytosol	31.24	40.78
TraesCS4A01G026200.1	Wheat	cytosol, nucleus, plasma membrane	34.68	40.67
TraesCS6D01G386200.1	Wheat	plasma membrane	39.19	40.59
VIT_12s0028g01430.t01	Wine grape	plasma membrane	38.48	40.55
EER88498	Sorghum	plasma membrane	40.38	40.48
TraesCS7D01G368100.1	Wheat	plasma membrane	40.26	40.31
Zm00001d008891_P001	Maize	plasma membrane	42.28	40.23
TraesCS3A01G015100.1	Wheat	plasma membrane	22.57	40.17
TraesCS1A01G017200.1	Wheat	plasma membrane	39.55	40.07
TraesCS3B01G079400.1	Wheat	cytosol, plasma membrane, plastid	24.35	39.96
TraesCS3A01G064400.1	Wheat	cytosol	24.11	39.88
EES00096	Sorghum	plasma membrane	40.97	39.79
HORVU6Hr1G092620.1	Barley	plasma membrane	37.77	39.75
VIT_12s0028g01280.t01	Wine grape	plasma membrane	40.62	39.72
GSMUA_Achr6P05570_001	Banana	mitochondrion, plastid	27.67	39.63
HORVU7Hr1G089080.11	Barley	plasma membrane	39.43	39.62
KXG29880	Sorghum	plasma membrane	39.43	39.57
VIT_12s0028g01530.t01	Wine grape	plasma membrane	39.43	39.43
Zm00001d016223_P001	Maize	endoplasmic reticulum, plasma membrane	37.89	39.14
Os02t0234450-00	Rice	plasma membrane	38.84	39.11
TraesCS2D01G427100.1	Wheat	extracellular, plasma membrane	38.6	39.06
TraesCS3D01G064800.1	Wheat	cytosol, plasma membrane, plastid	24.35	38.97
TraesCS2A01G429400.1	Wheat	plasma membrane	38.6	38.88
HORVU2Hr1G100250.10	Barley	plasma membrane	38.36	38.82
HORVU3Hr1G002210.3	Barley	plasma membrane	22.33	38.76
TraesCS2B01G449900.1	Wheat	extracellular, plasma membrane	38.48	38.76
HORVU5Hr1G001800.2	Barley	cytosol	31.59	38.61
TraesCS3A01G063700.1	Wheat	cytosol, plasma membrane, plastid	25.42	38.49
TraesCS3A01G064300.1	Wheat	cytosol	25.18	38.06
TraesCS3D01G062500.1	Wheat	plasma membrane	27.67	37.7
HORVU2Hr1G066280.1	Barley	plasma membrane	37.17	37.62
TraesCS5D01G469700.1	Wheat	plasma membrane	39.19	37.5
HORVU5Hr1G000910.1	Barley	endoplasmic reticulum, plasma membrane	35.51	37.42
TraesCS2D01G419800.1	Wheat	mitochondrion	27.2	37.18
KXG37964	Sorghum	endoplasmic reticulum, golgi, vacuole	35.63	37.13
TraesCS3D01G063800.1	Wheat	plasma membrane	28.15	37.03
TraesCS2A01G580900.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	34.92	37.03
TraesCS3D01G064700.2	Wheat	plasma membrane	28.27	37.01
HORVU2Hr1G124190.2	Barley	endoplasmic reticulum, plasma membrane	34.92	36.93
HORVU2Hr1G124250.1	Barley	endoplasmic reticulum, plasma membrane	34.92	36.93
TraesCS3B01G076900.1	Wheat	plasma membrane	28.15	36.92
OQU80090	Sorghum	plasma membrane	34.2	36.64
TraesCS3D01G062600.1	Wheat	plasma membrane	27.91	36.38
HORVU6Hr1G092730.1	Barley	plasma membrane	10.45	36.36
TraesCS3B01G077000.1	Wheat	plasma membrane	27.43	36.09
EES03148	Sorghum	plasma membrane	25.77	35.99
OQU86485	Sorghum	plasma membrane	26.6	35.96
HORVU3Hr1G002220.1	Barley	plasma membrane	26.84	35.93
Os01t0113350-00	Rice	plasma membrane, vacuole	27.67	35.74
KXG27741	Sorghum	endoplasmic reticulum, extracellular, plasma membrane	33.14	35.63
Zm00001d025065_P001	Maize	cytosol	30.4	35.6
TraesCSU01G045400.1	Wheat	plasma membrane	26.96	35.52
VIT_12s0028g01490.t01	Wine grape	cytosol	4.63	35.45
TraesCS3A01G016300.1	Wheat	plasma membrane	26.84	35.37
HORVU3Hr1G012100.2	Barley	plasma membrane	26.96	35.36
TraesCS3D01G012900.1	Wheat	plasma membrane	27.2	35.34
VIT_11s0016g04840.t01	Wine grape	plasma membrane	18.88	35.33
TraesCS3A01G016100.1	Wheat	cytosol	5.11	34.96
Zm00001d053087_P001	Maize	plasma membrane	26.96	34.76
Zm00001d053135_P001	Maize	plasma membrane	26.6	34.73
Os01t0113650-00	Rice	mitochondrion, plasma membrane	26.72	34.3
TraesCS2D01G591000.1	Wheat	plasma membrane	23.04	33.56
TraesCS2D01G419700.1	Wheat	cytosol	26.37	33.48
TraesCSU01G045100.1	Wheat	cytosol	4.87	33.33
TraesCSU01G166600.1	Wheat	cytosol	4.87	33.33
HORVU3Hr1G012080.10	Barley	plastid	19.24	32.02
VIT_04s0008g05500.t01	Wine grape	cytosol, nucleus, plasma membrane	29.93	31.9
HORVU3Hr1G012050.1	Barley	plasma membrane	15.56	31.72
VIT_18s0086g00200.t01	Wine grape	cytosol	23.28	31.66
OQU86484	Sorghum	cytosol	7.48	30.14
TraesCS3B01G075300.1	Wheat	plasma membrane	14.85	30.12
VIT_11s0016g05440.t01	Wine grape	plasma membrane	27.91	28.94
VIT_16s0050g01880.t01	Wine grape	plasma membrane	29.22	28.7
VIT_16s0050g01920.t01	Wine grape	cytosol, mitochondrion, nucleus, plastid	25.18	28.42
VIT_18s0086g00210.t01	Wine grape	plasma membrane	28.27	28.03
VIT_12s0028g01270.t01	Wine grape	plasma membrane	40.86	27.9
VIT_09s0002g06830.t01	Wine grape	plasma membrane	28.62	26.9
VIT_12s0028g01520.t01	Wine grape	plasma membrane	40.26	25.66
TraesCS3D01G062900.1	Wheat	extracellular, plasma membrane, vacuole	11.05	24.6
VIT_18s0001g03390.t01	Wine grape	plastid	20.07	19.91
TraesCS6A01G402100.1	Wheat	plasma membrane	37.89	19.07

Protein Annotations

KEGG:04150+2.7.11.1	KEGG:04151+2.7.11.1	KEGG:04714+2.7.11.1	KEGG:04926+2.7.11.1	KEGG:05165+2.7.11.1	Gene3D:1.10.510.10
EntrezGene:100245458	wikigene:100245458	MapMan:18.4.1.24.2	Gene3D:2.90.10.10	Gene3D:3.30.200.20	EMBL:AM433362
InterPro:Bulb-type_lectin_dom	InterPro:Bulb-type_lectin_dom_sf	ProteinID:CAN67059	ProteinID:CAN67059.1	ProteinID:CCB47403	ProteinID:CCB47403.1
ncoils:Coil	UniProt:F6H535	EMBL:FN595235	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:IPR001480	InterPro:IPR036426	InterPro:Kinase-like_dom_sf	EntrezGene:LOC100245458	wikigene:LOC100245458
PFAM:PF00069	PFAM:PF01453	PIRSF:PIRSF000641	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PFscan:PS50927	PANTHER:PTHR27002	PANTHER:PTHR27002:SF178	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00108
SMART:SM00220	InterPro:SRK-like_kinase	SUPFAM:SSF51110	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM
TMHMM:TMhelix	UniParc:UPI00015C9A77	ArrayExpress:VIT_12s0028g01650	EnsemblPlantsGene:VIT_12s0028g01650	EnsemblPlants:VIT_12s0028g01650.t01	RefSeq:XP_002277406
RefSeq:XP_002277406.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr12:+:2325209..2327737

Molecular Weight (calculated)

93322.3 Da

IEP (calculated)

4.985

GRAVY (calculated)

-0.094

Length

842 amino acids

Sequence
(BLAST)

001: MASICCPLVI ILILIGSVGF AQSDASKNES SPVFYLNSSV PLTWYNNDSI KIMTPADGSK VRVVLLRQQS ISFVCGFYCV EACNSYLFSI VAVGGGNSSV
101: VWSANRNYPV KENATLQLTV DGGLVLQDSD GTQVWSTNGS GNSILGMNLT EAGNLVLLGN KGALAWQSFD HPSDVLLVRQ CLNEGQTLIA SSSGDIWNQG
201: QYYATLTSDA GFAVFIDADQ AKLLMYYKLV PDNRSSNSTG LNYAELQQHG FLVNLGTSQV TSGRNSYEHS AQSDVKYMRL DFDGHLRIYQ HSDTTGLRVI
301: VDLITEDLGD CQYPLRCGEY GVCKADQYCS CPEGEDGVQY FQTDHGCSRI TPLSCEPSLH HLLEVKNATY FNTIDSDAAY PGIKDMDMCK QACLQNCSCG
401: GAFFRYENNV SDGYCFMPSK ILSIREGHIP NYNFTSATFI KVQINFVAPS LVPAAKTTRE NFPPTPSSGD GANIAAIVVG ASIVPLITFC LVVVTILATL
501: RRTSTVEEGE DYTIDQVPGM PVKFLYEDLR VATEDFKERV GSGGFGSVFK GLLADGTRIA VKRLDRIEQG MREFLAEVKT IGSLHHFNLV RLIGFCAEKS
601: NRLLVFEYMC NGSLDNWIFY GCQRPCLDWE TRKRIILDIA KGLAYLHEEC RHRIVHLDIK PQNILLDENF NAKVSDFGLS ELIGRDESQV FTTMRGTPGY
701: LAPEWSQPKV TVKVDIYSFG IVLLEIVTGR RNVDCTREES NSQMLRVLQK KAEEERLIEI VENLEEMKDH GEVVRMIRIG AWCLQDDPTR RPPMSVVVKV
801: LEGVMEVDSN IIYKFIHAMT STSPSDDKVC TEPEASVLSN PR

Best Arabidopsis Sequence Match ( AT1G34300.1 )
(BLAST)

001: MAVKTPFLKL LPLLLLLLHF PFSFSTIPLG SVIYASGSNQ NWPSPNSTFS VSFVPSPSPN SFLAAVSFAG SVPIWSAGTV DSRGSLRLHT SGSLRLTNGS
101: GTTVWDSKTD RLGVTSGSIE DTGEFILLNN RSVPVWSSFD NPTDTIVQSQ NFTAGKILRS GLYSFQLERS GNLTLRWNTS AIYWNHGLNS SFSSNLSSPR
201: LSLQTNGVVS IFESNLLGGA EIVYSGDYGD SNTFRFLKLD DDGNLRIYSS ASRNSGPVNA HWSAVDQCLV YGYCGNFGIC SYNDTNPICS CPSRNFDFVD
301: VNDRRKGCKR KVELSDCSGN TTMLDLVHTR LFTYEDDPNS ESFFAGSSPC RANCLSSVLC LASVSMSDGS GNCWQKHPGS FFTGYQWPSV PSTSYVKVCG
401: PVVANTLERA TKGDDNNSKV HLWIVAVAVI AGLLGLVAVE IGLWWCCCRK NPRFGTLSSH YTLLEYASGA PVQFTYKELQ RCTKSFKEKL GAGGFGTVYR
501: GVLTNRTVVA VKQLEGIEQG EKQFRMEVAT ISSTHHLNLV RLIGFCSQGR HRLLVYEFMR NGSLDNFLFT TDSAKFLTWE YRFNIALGTA KGITYLHEEC
601: RDCIVHCDIK PENILVDDNF AAKVSDFGLA KLLNPKDNRY NMSSVRGTRG YLAPEWLANL PITSKSDVYS YGMVLLELVS GKRNFDVSEK TNHKKFSIWA
701: YEEFEKGNTK AILDTRLSED QTVDMEQVMR MVKTSFWCIQ EQPLQRPTMG KVVQMLEGIT EIKNPLCPKT ISEVSFSGNS MSTSHASMFV ASGPTRSSSF
801: SATRSFQTMG ITSSGPASTR ISEGSMLGS

Arabidopsis Description

G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300 [Source:UniProtKB/Swiss-Prot;Acc:Q9XID3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.