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Wine grape
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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 3
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
EpiLoc:cytosol
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
VIT_06s0009g01910.t01
VIT_08s0040g00470.t01

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G34300.1 VIT_06s0009g01910.t01 AT2G41100.1 17360592
AT1G34300.1 VIT_08s0040g00470.t01 AT2G41100.1 17360592
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
VIT_18s0086g00210.t01 Wine grape plasma membrane 82.71 60.31
GSMUA_Achr10P... Banana plasma membrane 57.84 51.81
Solyc11g013880.1.1 Tomato plasma membrane 68.66 50.78
PGSC0003DMT400077643 Potato plasma membrane 68.5 50.66
KRH70212 Soybean plasma membrane 68.34 50.6
KRH08565 Soybean plasma membrane 67.04 49.7
KRG91776 Soybean plasma membrane 64.46 48.66
TraesCS5B01G520600.1 Wheat plasma membrane 65.91 47.22
TraesCS5D01G519800.1 Wheat plasma membrane 65.75 47.22
Bra036747.1-P Field mustard plasma membrane 63.0 47.1
TraesCS4A01G353300.1 Wheat plasma membrane 65.75 47.05
CDY46464 Canola plasma membrane 62.68 46.86
CDX91781 Canola extracellular, plasma membrane, vacuole 54.93 46.77
HORVU5Hr1G118460.1 Barley plasma membrane 65.27 46.76
CDX90728 Canola plasma membrane 58.32 46.58
Zm00001d034781_P001 Maize endoplasmic reticulum 63.97 46.48
Os03t0838100-01 Rice plasma membrane 64.14 46.27
Bra028049.1-P Field mustard plasma membrane 61.87 46.14
OQU90662 Sorghum plasma membrane 63.33 46.01
Bra000686.1-P Field mustard plasma membrane 57.51 45.99
CDY24320 Canola plasma membrane 62.2 45.67
AT1G34300.1 Thale cress plasma membrane 61.07 45.6
CDY03159 Canola plasma membrane 61.07 45.16
VIT_12s0028g01450.t01 Wine grape plasma membrane 22.94 33.81
VIT_08s0032g00830.t01 Wine grape cytosol 5.49 33.33
VIT_11s0016g04840.t01 Wine grape plasma membrane 24.07 33.11
VIT_08s0032g00810.t01 Wine grape cytosol 9.21 31.67
VIT_16s0050g01920.t01 Wine grape cytosol, mitochondrion, nucleus, plastid 36.35 30.16
VIT_04s0008g05500.t01 Wine grape cytosol, nucleus, plasma membrane 36.19 28.35
VIT_11s0016g05440.t01 Wine grape plasma membrane 35.38 26.97
VIT_12s0028g01640.t01 Wine grape plasma membrane 28.92 26.96
VIT_16s0050g01880.t01 Wine grape plasma membrane 37.32 26.95
TraesCS5B01G520400.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 18.42 25.91
TraesCS4A01G353100.1 Wheat extracellular 17.77 25.88
HORVU5Hr1G118510.1 Barley endoplasmic reticulum, extracellular, vacuole 18.26 25.86
TraesCS5D01G519600.1 Wheat cytosol 18.9 25.05
VIT_12s0028g01430.t01 Wine grape plasma membrane 31.99 24.78
VIT_12s0028g01530.t01 Wine grape plasma membrane 31.66 23.28
VIT_12s0028g01650.t01 Wine grape plasma membrane 31.66 23.28
VIT_09s0002g06830.t01 Wine grape plasma membrane 33.12 22.88
VIT_12s0028g01460.t01 Wine grape plasma membrane 28.43 22.65
VIT_12s0028g01630.t01 Wine grape plastid 30.53 21.14
VIT_18s0001g03390.t01 Wine grape plastid 28.11 20.49
VIT_12s0028g01280.t01 Wine grape plasma membrane 28.11 20.21
HORVU2Hr1G106300.1 Barley extracellular 10.34 17.93
HORVU2Hr1G020630.1 Barley cytosol, plastid 9.37 16.29
VIT_12s0028g01490.t01 Wine grape cytosol 2.75 15.45
VIT_12s0028g01520.t01 Wine grape plasma membrane 31.18 14.61
VIT_12s0028g01270.t01 Wine grape plasma membrane 28.43 14.27
Protein Annotations
KEGG:04150+2.7.11.1KEGG:04151+2.7.11.1KEGG:04714+2.7.11.1KEGG:04926+2.7.11.1KEGG:05165+2.7.11.1Gene3D:1.10.510.10
MapMan:18.4.1.24.2Gene3D:3.30.200.20ProteinID:CCB60805ProteinID:CCB60805.1UniProt:F6I1I8EMBL:FN596511
GO:GO:0000003GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0004674
GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0005623GO:GO:0005886GO:GO:0006464
GO:GO:0006468GO:GO:0007154GO:GO:0008150GO:GO:0008152GO:GO:0009856GO:GO:0009875
GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0016301GO:GO:0016310GO:GO:0016740
GO:GO:0019538GO:GO:0048544InterPro:IPR000719InterPro:Kinase-like_dom_sfPFAM:PF00069PFAM:PF00954
ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR27002PANTHER:PTHR27002:SF52InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BSSMART:SM00220SUPFAM:SSF56112InterPro:S_locus_glycoprot_domInterPro:Ser/Thr_kinase_ASTMHMM:TMhelix
UniParc:UPI000210975BArrayExpress:VIT_18s0086g00200EnsemblPlantsGene:VIT_18s0086g00200EnsemblPlants:VIT_18s0086g00200.t01RefSeq:XP_002267316RefSeq:XP_002267316.1
SEG:seg:::::
Description
No Description!
Coordinates
chr18:-:17398074..17400018
Molecular Weight (calculated)
68116.5 Da
IEP (calculated)
6.990
GRAVY (calculated)
-0.148
Length
619 amino acids
Sequence
(BLAST)
001: MAYSSDYAEG SDMLRFVRLD SDGNLRIYSF DRGSRISTVR WAAVKDQCEV FGYCGDLGIC SYHDSSPVCS CPSENFELVD PKDSTKGCKR KEEIENCAGV
101: VTMLELQHAK FLTYPPESPS QVFFVGILAC RLNCLMGGAC VASTSLSDGT GSCYMKVPGF VSGYQSPTLP STSYIKVCGP VSPNPSASLN GGDDTSCKLH
201: MWIVAAVVVG TLLGLVLLQV GLWWWCCCRN SPKFWGSSVP HALLEYASGA PVRFSYKDLR YSTKGFKEKL GAGGFGAVYR GVLANRTIVA VKQLEGIEQG
301: EKQFRMEVAT ISSTHHLNLV RLIGFCSEGR HRLLVYEFMK NGSLDIFLFP TGGHSGRLLN WESRFSIALG TARGITYLHE ECRDCIVHCD IKPENILLDE
401: NYSAKVSDFG LAKLINLKDH RYRTLTSVRG TRGYLAPEWL ANLPITSKSD VYGYGMVLLE MVSGRRNFEV SAESNGKKFS VWAYEEFEKG NMEGIVDKRL
501: VDREVNMEQA KRAVEVSFWC IQEQPSQRPT MGKVVQMLEG IIEIEKPPAP KAGTEECTGE SSRNVSSKVV AVPPSSSSLL EKTGCSSFVS GRTVEKSSLS
601: ARNVEIASAC LLQSEESET
Best Arabidopsis Sequence Match ( AT1G34300.1 )
(BLAST)
001: MAVKTPFLKL LPLLLLLLHF PFSFSTIPLG SVIYASGSNQ NWPSPNSTFS VSFVPSPSPN SFLAAVSFAG SVPIWSAGTV DSRGSLRLHT SGSLRLTNGS
101: GTTVWDSKTD RLGVTSGSIE DTGEFILLNN RSVPVWSSFD NPTDTIVQSQ NFTAGKILRS GLYSFQLERS GNLTLRWNTS AIYWNHGLNS SFSSNLSSPR
201: LSLQTNGVVS IFESNLLGGA EIVYSGDYGD SNTFRFLKLD DDGNLRIYSS ASRNSGPVNA HWSAVDQCLV YGYCGNFGIC SYNDTNPICS CPSRNFDFVD
301: VNDRRKGCKR KVELSDCSGN TTMLDLVHTR LFTYEDDPNS ESFFAGSSPC RANCLSSVLC LASVSMSDGS GNCWQKHPGS FFTGYQWPSV PSTSYVKVCG
401: PVVANTLERA TKGDDNNSKV HLWIVAVAVI AGLLGLVAVE IGLWWCCCRK NPRFGTLSSH YTLLEYASGA PVQFTYKELQ RCTKSFKEKL GAGGFGTVYR
501: GVLTNRTVVA VKQLEGIEQG EKQFRMEVAT ISSTHHLNLV RLIGFCSQGR HRLLVYEFMR NGSLDNFLFT TDSAKFLTWE YRFNIALGTA KGITYLHEEC
601: RDCIVHCDIK PENILVDDNF AAKVSDFGLA KLLNPKDNRY NMSSVRGTRG YLAPEWLANL PITSKSDVYS YGMVLLELVS GKRNFDVSEK TNHKKFSIWA
701: YEEFEKGNTK AILDTRLSED QTVDMEQVMR MVKTSFWCIQ EQPLQRPTMG KVVQMLEGIT EIKNPLCPKT ISEVSFSGNS MSTSHASMFV ASGPTRSSSF
801: SATRSFQTMG ITSSGPASTR ISEGSMLGS
Arabidopsis Description
G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300 [Source:UniProtKB/Swiss-Prot;Acc:Q9XID3]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.