CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
endoplasmic reticulum 2
extracellular 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	endoplasmic reticulum, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	endoplasmic reticulum
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY24320	Canola	plasma membrane	97.37	96.68
CDY46464	Canola	plasma membrane	86.26	87.2
CDX91781	Canola	extracellular, plasma membrane, vacuole	75.03	86.38
AT1G34300.1	Thale cress	plasma membrane	81.84	82.63
CDX90728	Canola	plasma membrane	58.66	63.35
VIT_18s0086g00200.t01	Wine grape	cytosol	45.16	61.07
GSMUA_Achr10P...	Banana	plasma membrane	49.1	59.48
VIT_18s0086g00210.t01	Wine grape	plasma membrane	60.22	59.36
Solyc11g013880.1.1	Tomato	plasma membrane	59.02	59.02
PGSC0003DMT400077643	Potato	plasma membrane	59.02	59.02
KRG91776	Soybean	plasma membrane	57.35	58.54
Os03t0838100-01	Rice	plasma membrane	57.59	56.18
HORVU5Hr1G118460.1	Barley	plasma membrane	57.59	55.79
TraesCS4A01G353300.1	Wheat	plasma membrane	57.47	55.61
TraesCS5D01G519800.1	Wheat	plasma membrane	57.23	55.57
TraesCS5B01G520600.1	Wheat	plasma membrane	57.35	55.56
OQU90662	Sorghum	plasma membrane	56.03	55.05
Zm00001d034781_P001	Maize	endoplasmic reticulum	56.03	55.05
HORVU5Hr1G118510.1	Barley	endoplasmic reticulum, extracellular, vacuole	24.85	47.6
TraesCS5B01G520400.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	24.97	47.5
TraesCS4A01G353100.1	Wheat	extracellular	23.78	46.82
HORVU2Hr1G020630.1	Barley	cytosol, plastid	19.0	44.66
HORVU2Hr1G106300.1	Barley	extracellular	18.76	43.98
TraesCS5D01G519600.1	Wheat	cytosol	24.49	43.9
CDY42356	Canola	plasma membrane	17.68	33.18
CDX70909	Canola	plasma membrane	17.44	33.18
CDX80409	Canola	plasma membrane	33.33	32.75
CDX88071	Canola	plasma membrane	34.29	32.61
CDX72354	Canola	plasma membrane	31.54	32.08
CDX75235	Canola	endoplasmic reticulum, plasma membrane	30.94	31.98
CDY13481	Canola	plasma membrane	31.3	31.87
CDY23321	Canola	plasma membrane	30.47	30.87
CDX80408	Canola	cytosol	20.79	29.59
CDY39882	Canola	plasma membrane	27.12	27.38
CDX95197	Canola	plasma membrane	27.36	26.57
CDX68834	Canola	plasma membrane	27.96	23.83
CDY45109	Canola	plasma membrane	17.44	20.39
CDX88861	Canola	endoplasmic reticulum	15.77	9.4
CDX70911	Canola	mitochondrion	0.0	0.0

Protein Annotations

KEGG:04150+2.7.11.1	KEGG:04151+2.7.11.1	KEGG:04714+2.7.11.1	KEGG:04926+2.7.11.1	KEGG:05165+2.7.11.1	Gene3D:1.10.510.10
MapMan:18.4.1.24.2	Gene3D:2.90.10.10	Gene3D:3.30.200.20	GO:A0A078ER44	InterPro:Bulb-type_lectin_dom	InterPro:Bulb-type_lectin_dom_sf
EnsemblPlants:CDY03159	ProteinID:CDY03159	ProteinID:CDY03159.1	GO:GO:0000003	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0007154	GO:GO:0008150	GO:GO:0008152	GO:GO:0009856	GO:GO:0009875
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0048544	EnsemblPlantsGene:GSBRNA2T00115596001
InterPro:IPR000719	InterPro:IPR001480	InterPro:IPR036426	InterPro:Kinase-like_dom_sf	PFAM:PF00069	PFAM:PF00954
PFAM:PF01453	PIRSF:PIRSF000641	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50927
PANTHER:PTHR27002	PANTHER:PTHR27002:SF52	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00108	SMART:SM00220
InterPro:SRK-like_kinase	SUPFAM:SSF51110	SUPFAM:SSF56112	InterPro:S_locus_glycoprot_dom	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-TM
TMHMM:TMhelix	UniParc:UPI0004EE74A4	SEG:seg	:	:	:

Description

BnaC06g08140D

Coordinates

chrLK031940:-:1109735..1112265

Molecular Weight (calculated)

91224.8 Da

IEP (calculated)

7.659

GRAVY (calculated)

-0.171

Length

837 amino acids

Sequence
(BLAST)

001: MSCREERSFT TKTMAEPPYP MLLPLLLLLL HFPFLTSAVP LGSVLYASGS DQSWSSPNST FAVSFLPSSS PNTFLAAVYF AGTVPIWSAG SVDSQGSLRL
101: SSSGSLQLIN GSNNTVWDSG TDALGVVSAA IEDSGSLVLL NNRNKTVWSS FDHPTDTIVQ SQNFSAGKIL RSGSYSFQLE RRGNLTLTWN NSTVYWSQGL
201: NSSFSSNLSS PSLALQTNGV VLMFDSTLTG GAETIYSDDY GEGSNTFRFL KLDDDGNLRI YSSASRNTGP VSPHWSAVAD QCLVYGYCGN FGICSYNDTK
301: PICLCPSRNF DPVDVNDRRK GCKRKVELSN CSSNAAMLDL DHTRLITDPN DPNSQSFFAG SSPCRGNCLV SGVCLASVSM SDGSGNCWQK QPGSFITGYQ
401: SSSVPSTSYV KVCGPVLLNE PLVGSKGDGN NSKVHLWIVA VAVLAGFLVG LWWCCCRNNP RFGALSSHYT LLEYASGAPV QFTYRELQRC TKSFKEKLGA
501: GGFGSVYRGV LSNKTVVAVK QLEGIEQGEK QFRMEVATIS STHHLNLVRL IGFCSEGRHR LLVYEFMRNG SLDSFLFSTH SGKLLTWEYR FNIALGTAKG
601: ITYLHEECRD CIVHCDIKPE NILVDDNYTA KVSDFGLAKL LNPKDNRHKN LSSVRGTRGY LAPEWLANLP ITSKSDVYSY GMVLLEIVSG QRNFDVSERT
701: NHKKFSIWAY EEFDKGNTEA ILDMRLSEDQ TVDMEQVRRM VQTSFWCIQE QPLQRPAMGK VVQMLEGITA INKPPRPKTL SAVSISGNSG STSHASILVA
801: SGPTRSSSSS AATRSFQTMG ITSSGPASTI ISEGSLL

Best Arabidopsis Sequence Match ( AT1G34300.1 )
(BLAST)

001: MAVKTPFLKL LPLLLLLLHF PFSFSTIPLG SVIYASGSNQ NWPSPNSTFS VSFVPSPSPN SFLAAVSFAG SVPIWSAGTV DSRGSLRLHT SGSLRLTNGS
101: GTTVWDSKTD RLGVTSGSIE DTGEFILLNN RSVPVWSSFD NPTDTIVQSQ NFTAGKILRS GLYSFQLERS GNLTLRWNTS AIYWNHGLNS SFSSNLSSPR
201: LSLQTNGVVS IFESNLLGGA EIVYSGDYGD SNTFRFLKLD DDGNLRIYSS ASRNSGPVNA HWSAVDQCLV YGYCGNFGIC SYNDTNPICS CPSRNFDFVD
301: VNDRRKGCKR KVELSDCSGN TTMLDLVHTR LFTYEDDPNS ESFFAGSSPC RANCLSSVLC LASVSMSDGS GNCWQKHPGS FFTGYQWPSV PSTSYVKVCG
401: PVVANTLERA TKGDDNNSKV HLWIVAVAVI AGLLGLVAVE IGLWWCCCRK NPRFGTLSSH YTLLEYASGA PVQFTYKELQ RCTKSFKEKL GAGGFGTVYR
501: GVLTNRTVVA VKQLEGIEQG EKQFRMEVAT ISSTHHLNLV RLIGFCSQGR HRLLVYEFMR NGSLDNFLFT TDSAKFLTWE YRFNIALGTA KGITYLHEEC
601: RDCIVHCDIK PENILVDDNF AAKVSDFGLA KLLNPKDNRY NMSSVRGTRG YLAPEWLANL PITSKSDVYS YGMVLLELVS GKRNFDVSEK TNHKKFSIWA
701: YEEFEKGNTK AILDTRLSED QTVDMEQVMR MVKTSFWCIQ EQPLQRPTMG KVVQMLEGIT EIKNPLCPKT ISEVSFSGNS MSTSHASMFV ASGPTRSSSF
801: SATRSFQTMG ITSSGPASTR ISEGSMLGS

Arabidopsis Description

G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300 [Source:UniProtKB/Swiss-Prot;Acc:Q9XID3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.