CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
golgi 5
plasma membrane 7
endoplasmic reticulum 6
vacuole 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY23321	Canola	plasma membrane	69.12	69.37
CDX75235	Canola	endoplasmic reticulum, plasma membrane	63.09	64.57
CDY13481	Canola	plasma membrane	62.48	63.02
CDX72354	Canola	plasma membrane	62.48	62.94
AT4G32300.1	Thale cress	plasma membrane	61.52	62.12
VIT_04s0008g05500.t01	Wine grape	cytosol, nucleus, plasma membrane	48.01	50.38
PGSC0003DMT400082723	Potato	endoplasmic reticulum, nucleus, plasma membrane, plastid	46.08	49.48
KRH52432	Soybean	endoplasmic reticulum, plasma membrane, vacuole	48.01	48.71
KRH61766	Soybean	extracellular, plasma membrane	47.77	48.53
Solyc08g059730.1.1	Tomato	plasma membrane	47.29	48.51
KRH15882	Soybean	plasma membrane	47.29	48.4
KRH05175	Soybean	plasma membrane	47.17	48.15
CDX68834	Canola	plasma membrane	56.94	48.07
TraesCS7B01G196400.2	Wheat	cytosol, endoplasmic reticulum, plasma membrane, plastid	36.19	46.3
GSMUA_Achr7P10190_001	Banana	plasma membrane	37.88	45.77
OQU76372	Sorghum	plasma membrane	45.48	44.99
Zm00001d045950_P003	Maize	cytosol, endoplasmic reticulum, plasma membrane	45.24	44.17
Os06t0494100-02	Rice	mitochondrion	44.75	43.91
TraesCS7D01G231000.1	Wheat	mitochondrion, plasma membrane	44.03	43.4
TraesCS7A01G230900.1	Wheat	mitochondrion, plasma membrane	43.67	43.2
KRH23578	Soybean	endoplasmic reticulum, plasma membrane	41.98	42.8
KRH09726	Soybean	plasma membrane	41.86	42.63
TraesCS3D01G480200.1	Wheat	mitochondrion	39.32	41.74
HORVU7Hr1G047150.8	Barley	mitochondrion, plasma membrane	43.55	41.59
TraesCS3A01G091800.1	Wheat	endoplasmic reticulum, nucleus, plasma membrane	39.69	39.83
VIT_09s0002g06830.t01	Wine grape	plasma membrane	42.22	39.06
VIT_11s0016g05440.t01	Wine grape	plasma membrane	36.19	36.95
CDY42356	Canola	plasma membrane	19.78	36.77
TraesCS3B01G107000.1	Wheat	plasma membrane	37.39	35.84
CDX70909	Canola	plasma membrane	17.85	33.64
CDX90728	Canola	plasma membrane	26.66	28.52
CDX95197	Canola	plasma membrane	29.19	28.07
CDX91781	Canola	extracellular, plasma membrane, vacuole	24.37	27.79
CDY03159	Canola	plasma membrane	27.38	27.12
CDX80409	Canola	plasma membrane	27.86	27.11
CDY46464	Canola	plasma membrane	27.02	27.05
CDY24320	Canola	plasma membrane	27.26	26.81
CDX80408	Canola	cytosol	18.7	26.36
CDX88071	Canola	plasma membrane	27.86	26.25
CDY45109	Canola	plasma membrane	19.42	22.49
CDX88861	Canola	endoplasmic reticulum	16.53	9.75
CDX70911	Canola	mitochondrion	0.0	0.0

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.24.2	Gene3D:2.90.10.10	Gene3D:3.30.200.20	GO:A0A078HPW0	UniProt:A0A078HPW0
InterPro:Bulb-type_lectin_dom	InterPro:Bulb-type_lectin_dom_sf	EnsemblPlants:CDY39882	ProteinID:CDY39882	ProteinID:CDY39882.1	ncoils:Coil
GO:GO:0000166	GO:GO:0003674	GO:GO:0003676	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488
GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00068720001	InterPro:IPR000719
InterPro:IPR001480	InterPro:IPR001878	InterPro:IPR036426	InterPro:Kinase-like_dom_sf	PFAM:PF00069	PFAM:PF01453
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50158	PFscan:PS50927	PANTHER:PTHR27002
PANTHER:PTHR27002:SF31	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00108	SMART:SM00220	SUPFAM:SSF51110
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0004EDFB0D	InterPro:Znf_CCHC
SEG:seg	:	:	:	:	:

Description

BnaC03g67350DBnaC03g67350D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HPW0]

Coordinates

chrLK032459:+:173102..177224

Molecular Weight (calculated)

93258.2 Da

IEP (calculated)

8.169

GRAVY (calculated)

-0.379

Length

829 amino acids

Sequence
(BLAST)

001: MRGFFFFFFF LTCLAFFINP LHAGVPYNGS IAPVFAGSQM NYINNKGIFL ESINKDFGFG FITTPDDVTL FTLSIVHRSS SRLIWSANRA SPVSNSDKLQ
101: FQEDGNVVLR GAEVWRLENS GKNASRIELR DSGNLVVVSG AGASIWESFD HPTDTLITNQ VFKEGMKLTS NASSTSNMTY VLEIKSADMF LSVNSLTPQV
201: YWSMGKDRGR IIDKYGDDQC ATPESCGPYY VCSVGKVCGC VSGLPRARDC KSGITSPCKK TENNATLSMK LVNARDKVDY FALGFASPFS KNTSLDSFLV
301: TASCLIGLVA LKPLKMEILV LCLTSRRKKT VLDDDQDQEQ SSDEDNFLDN LSGMPIRFTY KDLQSATNNF SVKLGQGGFG SVYEGSLPDG SRLAVKKLEG
401: IGQGKKEFRA EVSIIGSIHH LHLVRLRGFC AEGAHRLLAY EFLAKGSLER WIFSRRDEDI LLDWDTRFNI AVGTAKGLAY LHEDCDARII HCDIKPENIL
501: LDDNFNAKVS DFGLAKLMTR EQSHVFTTMR GTRGYLAPEW ITNYAISEKS DVYSYGMVLL ELIGGRKNYD PSESSEKCHF PSYAFKMMEE GKLLEIVDGK
601: MKNFDVDDER VQRTMKTALW CIQEDMHLRP SMSKVVQMLE GVFPVAEMMN KTYITFHKQL HFLPEIYRKC GYTRFSELMV ALMLAEKNNE LLIKNHNSRP
701: TGAKAFPEVN ATGIENSERS TQANRGHGRR FNNKRGKTYN PKWRGSNKWV RPGQVSKGKE TQEDTTQKRE TVCYRCGCKG HWSRTCRTPS HLCKLYQEST
801: KGKAKEVNLT ENVEGTSYLE SSDFANELD

Best Arabidopsis Sequence Match ( AT1G34300.1 )
(BLAST)

001: MAVKTPFLKL LPLLLLLLHF PFSFSTIPLG SVIYASGSNQ NWPSPNSTFS VSFVPSPSPN SFLAAVSFAG SVPIWSAGTV DSRGSLRLHT SGSLRLTNGS
101: GTTVWDSKTD RLGVTSGSIE DTGEFILLNN RSVPVWSSFD NPTDTIVQSQ NFTAGKILRS GLYSFQLERS GNLTLRWNTS AIYWNHGLNS SFSSNLSSPR
201: LSLQTNGVVS IFESNLLGGA EIVYSGDYGD SNTFRFLKLD DDGNLRIYSS ASRNSGPVNA HWSAVDQCLV YGYCGNFGIC SYNDTNPICS CPSRNFDFVD
301: VNDRRKGCKR KVELSDCSGN TTMLDLVHTR LFTYEDDPNS ESFFAGSSPC RANCLSSVLC LASVSMSDGS GNCWQKHPGS FFTGYQWPSV PSTSYVKVCG
401: PVVANTLERA TKGDDNNSKV HLWIVAVAVI AGLLGLVAVE IGLWWCCCRK NPRFGTLSSH YTLLEYASGA PVQFTYKELQ RCTKSFKEKL GAGGFGTVYR
501: GVLTNRTVVA VKQLEGIEQG EKQFRMEVAT ISSTHHLNLV RLIGFCSQGR HRLLVYEFMR NGSLDNFLFT TDSAKFLTWE YRFNIALGTA KGITYLHEEC
601: RDCIVHCDIK PENILVDDNF AAKVSDFGLA KLLNPKDNRY NMSSVRGTRG YLAPEWLANL PITSKSDVYS YGMVLLELVS GKRNFDVSEK TNHKKFSIWA
701: YEEFEKGNTK AILDTRLSED QTVDMEQVMR MVKTSFWCIQ EQPLQRPTMG KVVQMLEGIT EIKNPLCPKT ISEVSFSGNS MSTSHASMFV ASGPTRSSSF
801: SATRSFQTMG ITSSGPASTR ISEGSMLGS

Arabidopsis Description

G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300 [Source:UniProtKB/Swiss-Prot;Acc:Q9XID3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.