CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 6
golgi 4
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX75235	Canola	endoplasmic reticulum, plasma membrane	70.98	86.05
CDY23321	Canola	plasma membrane	64.36	76.51
CDY13481	Canola	plasma membrane	63.95	76.4
CDX72354	Canola	plasma membrane	63.75	76.06
AT4G32300.1	Thale cress	plasma membrane	62.93	75.27
Bra040074.1-P	Field mustard	cytosol	12.93	71.35
CDY39882	Canola	plasma membrane	48.07	56.94
VIT_04s0008g05500.t01	Wine grape	cytosol, nucleus, plasma membrane	44.3	55.06
PGSC0003DMT400082723	Potato	endoplasmic reticulum, nucleus, plasma membrane, plastid	42.77	54.4
Solyc08g059730.1.1	Tomato	plasma membrane	43.69	53.09
KRH52432	Soybean	endoplasmic reticulum, plasma membrane, vacuole	43.89	52.75
KRH05175	Soybean	plasma membrane	43.58	52.71
KRH15882	Soybean	plasma membrane	43.18	52.35
KRH61766	Soybean	extracellular, plasma membrane	43.48	52.33
GSMUA_Achr7P10190_001	Banana	plasma membrane	34.73	49.71
TraesCS7B01G196400.2	Wheat	cytosol, endoplasmic reticulum, plasma membrane, plastid	32.69	49.54
OQU76372	Sorghum	plasma membrane	39.0	45.7
Os06t0494100-02	Rice	mitochondrion	39.0	45.33
TraesCS7A01G230900.1	Wheat	mitochondrion, plasma membrane	38.29	44.87
TraesCS7D01G231000.1	Wheat	mitochondrion, plasma membrane	38.29	44.71
Zm00001d045950_P003	Maize	cytosol, endoplasmic reticulum, plasma membrane	38.59	44.64
KRH23578	Soybean	endoplasmic reticulum, plasma membrane	36.76	44.4
KRH09726	Soybean	plasma membrane	36.76	44.35
TraesCS3D01G480200.1	Wheat	mitochondrion	34.32	43.15
HORVU7Hr1G047150.8	Barley	mitochondrion, plasma membrane	37.88	42.86
VIT_09s0002g06830.t01	Wine grape	plasma membrane	38.9	42.63
TraesCS3A01G091800.1	Wheat	endoplasmic reticulum, nucleus, plasma membrane	33.2	39.47
VIT_11s0016g05440.t01	Wine grape	plasma membrane	30.86	37.32
TraesCS3B01G107000.1	Wheat	plasma membrane	32.79	37.23
CDY42356	Canola	plasma membrane	14.36	31.61
CDX70909	Canola	plasma membrane	12.83	28.64
CDX90728	Canola	plasma membrane	22.3	28.26
CDX91781	Canola	extracellular, plasma membrane, vacuole	20.88	28.2
CDY03159	Canola	plasma membrane	23.83	27.96
CDY24320	Canola	plasma membrane	23.83	27.76
CDY46464	Canola	plasma membrane	23.12	27.42
CDX95197	Canola	plasma membrane	23.93	27.26
CDX80408	Canola	cytosol	15.78	26.36
CDX80409	Canola	plasma membrane	22.61	26.06
CDX88071	Canola	plasma membrane	23.01	25.68
CDY45109	Canola	plasma membrane	13.95	19.13
CDX88861	Canola	endoplasmic reticulum	11.51	8.04
CDX70911	Canola	mitochondrion	0.0	0.0

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.24.2	Gene3D:2.90.10.10	Gene3D:3.30.200.20	GO:A0A078BY51	InterPro:Bulb-type_lectin_dom
InterPro:Bulb-type_lectin_dom_sf	EnsemblPlants:CDX68834	ProteinID:CDX68834	ProteinID:CDX68834.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
EnsemblPlantsGene:GSBRNA2T00130556001	InterPro:IPR000719	InterPro:IPR001480	InterPro:IPR036426	InterPro:Kinase-like_dom_sf	PFAM:PF00069
PFAM:PF01453	PFAM:PF07714	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50927
PANTHER:PTHR27002	PANTHER:PTHR27002:SF31	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00108	SMART:SM00220
SUPFAM:SSF51110	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	TMHMM:TMhelix
UniParc:UPI0004EED5D0	SEG:seg	:	:	:	:

Description

BnaC01g06190D

Coordinates

chrLK031789:+:1495619..1499800

Molecular Weight (calculated)

108098.0 Da

IEP (calculated)

5.758

GRAVY (calculated)

-0.226

Length

982 amino acids

Sequence
(BLAST)

001: MRGFFIVFLT TCLTLFPHPL HGGVPYTGSI TPGFEGTQMN YINNNGIFLE SNSSAFGFGF VTTPASVTLF TLSIVHKPTS RLIWSANRAS PVSNSDKLQL
101: DDANKNASRM ELRDSGNLVV VSGDGASIWE SFDHPTDTLI TNQAFKEGMK LTSNPSSSNM SYSLEIKSGD MVLSVDSSTP QTYWSMGNDR GRIIEQNGVV
201: TSSSLLGNSW RFFDEKQSLL WQFVYSDNKD DNATWIAVLG NNGVISFSNL GSGVSAADSS TKIPSDQCAT PEPCGSYFTC SGSKVCGCVS GLSRVRSDCK
301: SGIDTSLCNN KKDNNASSRV ELVNAGDGVD YFALGFASPF SKKASLDSCK EFCSSNCSCL GLFFRNSSGD CFLFDWIGSF KASGSGGSGL VSYIKVATNE
401: EDGKHFPYIV IIVLATVFII GCLIFVAFRI HRRTRTKTIL DADEEHSSEE DNFLENLSGM PIRFTFKDLQ SATNNFSIKL GQGGFGSVYE GTLPDGSRLA
501: VKKLEGIGQG KKEFRAEVSI IGSIHHLHLV RLRGFCAEGA HRLLVYEFLA KGSLEKWIFR RRDGDILLDW DTRFNIAVGT AKGLAYLHED CDARIIHCDI
601: KPENILLDDN FNAKKSDVYS YGMVLLELIG GRKNYDPSES SEKCHFPSYA FKMMEEGKLL EIVDGKMKNV DVDDERVQRA MKTALWCIQE DMHLRPSMSK
701: VVQMLEGVFH VVQPPSSSTL GSRLYSSFCK SISEEGGGFS PHKQAKEEKT RKAGSYENEN VLQCPLSIYV DYINNYGIFL ESINKDFGFG FITTPDDVTL
801: FTLSIVHRSS SRLIWSANRA SPVSNSDKLQ FQDNGNVVLR GEGGGGGPEV WRLDNSGKSA SRIELRDSGN LVVVSGDGAS IWESFEHPTD TLITNQVLKE
901: GMELTSNASS TSNMTYSLEI KSGDMFLSVN SLTPQVYWSM RSDRGRIIDK YGGVVTSSSL LGNSWMFFDD KQSFSWEWCV CG

Best Arabidopsis Sequence Match ( AT4G32300.1 )
(BLAST)

001: MRGVFIVIVT CLVFLPDPLR AGVASIGSIT PGFGGSQMNY INNDGIFLES NNSAFGFGFV TTQDSVTLFT LSIIHKSSTK LIWSANRASP VSNSDKFVFD
101: DNGNVVMEGT EVWRLDNSGK NASRIELRDS GNLVVVSVDG TSIWESFDHP TDTLITNQAF KEGMKLTSSP SSSNMTYALE IKSGDMVLSV NSLTPQVYWS
201: MANARERIIN KDGGVVTSSS LLGNSWRFFD QKQVLLWQFV FSDNKDDNTT WIAVLGNNGV ISFSNLGSGA SAADSSTKIP SDLCGTPEPC GPYYVCSGSK
301: VCGCVSGLSR ARSDCKTGIT SPCKKTKDNA TLPLQLVSAG DGVDYFALGY APPFSKKTDL DSCKEFCHNN CSCLGLFFQN SSGNCFLFDY IGSFKTSGNG
401: GSGFVSYIKI ASTGSGGGDN GEDDGKHFPY VVIIVVVTVF IIAVLIFVAF RIHKRKKMIL EAPQESSEED NFLENLSGMP IRFAYKDLQS ATNNFSVKLG
501: QGGFGSVYEG TLPDGSRLAV KKLEGIGQGK KEFRAEVSII GSIHHLHLVR LRGFCAEGAH RLLAYEFLSK GSLERWIFRK KDGDVLLDWD TRFNIALGTA
601: KGLAYLHEDC DARIVHCDIK PENILLDDNF NAKVSDFGLA KLMTREQSHV FTTMRGTRGY LAPEWITNYA ISEKSDVYSY GMVLLELIGG RKNYDPSETS
701: EKCHFPSFAF KKMEEGKLMD IVDGKMKNVD VTDERVQRAM KTALWCIQED MQTRPSMSKV VQMLEGVFPV VQPPSSSTMG SRLYSSFFKS ISEDGGATTS
801: SGPSDCNSEN YLSAVRLSGP R

Arabidopsis Description

SD25G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWZ5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.