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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 8
  • golgi 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plastid, secretory
BaCelLo:secretory
ChloroP:plastid
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra027975.1-P Field mustard plasma membrane 49.88 96.41
CDY42356 Canola plasma membrane 49.77 96.19
AT5G35370.1 Thale cress plasma membrane 83.87 82.91
PGSC0003DMT400002386 Potato plasma membrane 53.25 52.7
KRH53204 Soybean plasma membrane 52.55 51.77
GSMUA_Achr2P14690_001 Banana plasma membrane 38.86 48.34
Solyc04g015460.2.1 Tomato endoplasmic reticulum, plasma membrane, vacuole 48.49 48.1
GSMUA_Achr9P29120_001 Banana plasma membrane 38.28 46.54
Os12t0640700-01 Rice cytosol, plasma membrane 27.15 44.49
GSMUA_Achr9P27140_001 Banana plastid 38.98 44.04
EES07585 Sorghum plasma membrane 42.69 41.63
Zm00001d018185_P001 Maize plasma membrane 42.23 41.27
HORVU6Hr1G080460.1 Barley endoplasmic reticulum, plasma membrane 42.81 41.23
TraesCS6A01G331200.1 Wheat plasma membrane 42.34 41.2
TraesCS6D01G310400.1 Wheat plasma membrane 42.11 40.74
TraesCS6B01G361900.1 Wheat plasma membrane 42.11 40.65
Os02t0767400-01 Rice plasma membrane 42.58 40.55
Zm00001d018182_P001 Maize plasma membrane 41.76 40.4
VIT_18s0001g03390.t01 Wine grape plastid 39.1 39.69
Os09t0454900-01 Rice plasma membrane 41.3 39.64
EER96846 Sorghum plasma membrane 41.53 39.6
Zm00001d020703_P001 Maize plasma membrane 41.42 39.45
TraesCS5D01G243800.1 Wheat endoplasmic reticulum, plasma membrane 40.72 38.53
HORVU5Hr1G068070.1 Barley plasma membrane 40.49 38.27
EES17510 Sorghum mitochondrion, plasma membrane 39.68 36.97
TraesCS5A01G237700.1 Wheat plasma membrane 39.21 36.9
TraesCS5B01G236200.1 Wheat plasma membrane 40.49 36.43
HORVU5Hr1G000240.2 Barley plasma membrane 39.68 35.81
Zm00001d031230_P001 Maize plasma membrane 39.79 35.65
TraesCS5D01G001400.1 Wheat plasma membrane 40.37 35.62
TraesCSU01G136100.1 Wheat plasma membrane 39.79 35.47
TraesCS5B01G000800.1 Wheat plasma membrane 40.14 35.45
CDX70909 Canola plasma membrane 17.17 33.64
CDX75235 Canola endoplasmic reticulum, plasma membrane 30.97 32.96
CDY13481 Canola plasma membrane 31.32 32.85
CDX72354 Canola plasma membrane 31.32 32.81
CDY23321 Canola plasma membrane 31.32 32.69
CDY39882 Canola plasma membrane 28.07 29.19
CDX91781 Canola extracellular, plasma membrane, vacuole 24.13 28.61
CDX90728 Canola plasma membrane 25.06 27.87
CDY46464 Canola plasma membrane 26.68 27.78
CDY03159 Canola plasma membrane 26.57 27.36
CDY24320 Canola plasma membrane 26.57 27.16
CDX80409 Canola plasma membrane 25.17 25.47
CDX88071 Canola plasma membrane 25.41 24.89
CDX80408 Canola cytosol 16.47 24.15
CDX68834 Canola plasma membrane 27.26 23.93
CDY45109 Canola plasma membrane 17.29 20.81
CDX88861 Canola endoplasmic reticulum 15.89 9.75
CDX70911 Canola mitochondrion 0.0 0.0
Protein Annotations
KEGG:04150+2.7.11.1KEGG:04151+2.7.11.1KEGG:04714+2.7.11.1KEGG:04926+2.7.11.1KEGG:05165+2.7.11.1Gene3D:1.10.510.10
MapMan:18.4.1.24.2Gene3D:2.90.10.10Gene3D:3.30.200.20GO:A0A078E219InterPro:Bulb-type_lectin_domInterPro:Bulb-type_lectin_dom_sf
EnsemblPlants:CDX95197ProteinID:CDX95197ProteinID:CDX95197.1GO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0004672GO:GO:0004674GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0006464
GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016020GO:GO:0016021
GO:GO:0016301GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00100786001InterPro:IPR000719InterPro:IPR001480
InterPro:IPR003609InterPro:IPR036426InterPro:Kinase-like_dom_sfPFAM:PF00069PFAM:PF01453PIRSF:PIRSF000641
ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PFscan:PS50927PFscan:PS50948PFscan:PS51257
PANTHER:PTHR27002PANTHER:PTHR27002:SF112InterPro:Pan_appInterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00108
SMART:SM00220SMART:SM00473InterPro:SRK-like_kinaseSUPFAM:SSF51110SUPFAM:SSF56112InterPro:Ser/Thr_kinase_AS
SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0004EEAA1ASEG:seg::
Description
BnaC09g16730D
Coordinates
chrLK031887:+:499941..502550
Molecular Weight (calculated)
95280.7 Da
IEP (calculated)
7.185
GRAVY (calculated)
-0.122
Length
862 amino acids
Sequence
(BLAST)
001: MRSVFLLLFF CLYLLFASVS CGSFREFVYP NFTASNLRFI DSSKGAFLFS PNSIFKAGLF SPGDDSSSDF YFSIIHVDSD STIWSSNRDS PVSRAGKMNL
101: SPQGISVIED GVNQTPVWST PVLASPVYSL RLMDSGNLLL LDRLNASLWE SFRFPTDTIV LGQRLPVGMF LSGSVSRYNL SQGDYKFVVV ETGGFMKWRG
201: QNYWKLRMHT QANVDSNFPV EFLTVTTSGL ALMGRNGTTA VIRVPLPPSS DFRVAKMDPS GKFIVSRFSG KSMVTEISGP MDPCQVPLVC GKLRVCNLDN
301: DSENESCSCV NGMRLDASKN TCVPVNQSLS LSVSCEGSNI SYFELGHGLS YFSTRFTDPV EHDIELSTCH DLCSKNCSCL GVFYENTSRS CYLVKDSFGS
401: LSLVTNSKDN HDLTGYVKLS VKKPNAPHQP PGGKTSFPLT ALVLLPCSGF FLVIALGFLW WRRCAVMRYS SIREKQATRL GSFGSGDLGS FRIPGLPRKF
501: EFEELEQATE NFKLQIGSGG FGSVYKGILP DQTLIAVKKI TNHGLNGRQE FCTEIAVIGN IRHANLVKLR GFCARGRQLL LVYEYMNHGS LEKTLFGGNG
601: PVLEWQERFD IALGTARGLA YLHSGCEQKI IHCDVKPENI LLHDHFQPKI SDFGLSKLLS PEESSLFTTM RGTRGYLAPE WITNTAISEK ADVYSYGMVL
701: LELVSGRKNC FAAEENHQNN NSSTTTTTSS GLVYFPLYAL DMHEQGSYME LADPRLEGRV TSQEVAKLVR IALCCVHEEP ALRPTMAAVV GMFEGTIPVG
801: NPRMESLNFL RFYGLRFAES SIVEGGNGES DNMDFHRRES SNSGGYRQSA SYVASQEVSG PR
Best Arabidopsis Sequence Match ( AT5G35370.1 )
(BLAST)
001: MKSTFLLLLL LLSLNLLFVF VSCASSIEFV YPNFTASNLR FVDSSKGAFL LSRNSIFKAG LFSPGGDDSS TGFYFSVVHV DSGSTIWSSN RDSPVSSSGT
101: MNLTPQGISV IEDGKSQIPV WSTPVLASPV KSLRLTDAGN LLLLDHLNVS LWESFDFPTD SIVLGQRLKL GMFLSGSVSR SDFSTGDYKF LVGESDGLMQ
201: WRGQNYWKLR MHIRANVDSN FPVEYLTVTT SGLALMARNG TVVVVRVALP PSSDFRVAKM DSSGKFIVSR FSGKNLVTEF SGPMDSCQIP FVCGKLGLCN
301: LDNASENQSC SCPDEMRMDA GKGVCVPVSQ SLSLPVSCEA RNISYLELGL GVSYFSTHFT DPVEHGLPLL ACHDICSKNC SCLGVFYENT SRSCYLVKDS
401: FGSLSLVKNS PENHDLIGYV KLSIRKTNAQ PPGNNNRGGS SFPVIALVLL PCSGFFLLIA LGLLWWRRCA VMRYSSIREK QVTRPGSFES GDLGSFHIPG
501: LPQKFEFEEL EQATENFKMQ IGSGGFGSVY KGTLPDETLI AVKKITNHGL HGRQEFCTEI AIIGNIRHTN LVKLRGFCAR GRQLLLVYEY MNHGSLEKTL
601: FSGNGPVLEW QERFDIALGT ARGLAYLHSG CDQKIIHCDV KPENILLHDH FQPKISDFGL SKLLNQEESS LFTTMRGTRG YLAPEWITNA AISEKADVYS
701: YGMVLLELVS GRKNCSFRSR SNSVTEDNNQ NHSSTTTTST GLVYFPLYAL DMHEQGRYME LADPRLEGRV TSQEAEKLVR IALCCVHEEP ALRPTMAAVV
801: GMFEGSIPLG NPRMESLNFL RFYGLRFAES SMVEGQNGES ETMVFHRRES SNSGGSRQSA SYIASQEVSG PR
Arabidopsis Description
G-type lectin S-receptor-like serine/threonine-protein kinase At5g35370 [Source:UniProtKB/Swiss-Prot;Acc:O65238]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.