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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 8
  • golgi 5
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, secretory
BaCelLo:secretory
EpiLoc:plasma membrane
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:nucleus
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
plasma membrane: 27800704
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d020703_P001 Maize plasma membrane 72.94 72.38
EER96846 Sorghum plasma membrane 72.05 71.57
TraesCS5D01G243800.1 Wheat endoplasmic reticulum, plasma membrane 72.16 71.13
HORVU5Hr1G068070.1 Barley plasma membrane 71.38 70.29
TraesCS5A01G237700.1 Wheat plasma membrane 71.49 70.09
TraesCS5B01G236200.1 Wheat plasma membrane 72.61 68.06
Os02t0767400-01 Rice plasma membrane 50.89 50.5
Os12t0640700-01 Rice cytosol, plasma membrane 29.06 49.62
Bra027975.1-P Field mustard plasma membrane 24.5 49.33
CDY42356 Canola plasma membrane 24.5 49.33
KRH53204 Soybean plasma membrane 43.65 44.8
PGSC0003DMT400002386 Potato plasma membrane 43.1 44.43
AT5G35370.1 Thale cress plasma membrane 41.76 43.0
PGSC0003DMT400070026 Potato endoplasmic reticulum, plasma membrane, vacuole 40.65 41.48
CDX95197 Canola plasma membrane 39.64 41.3
Solyc04g015460.2.1 Tomato endoplasmic reticulum, plasma membrane, vacuole 39.76 41.08
Os06t0142650-00 Rice plasma membrane 16.82 32.75
Os06t0494100-02 Rice mitochondrion 30.18 32.07
Os02t0234450-00 Rice plasma membrane 26.61 28.59
Os04t0303100-00 Rice plasma membrane 26.06 28.02
Os01t0113350-00 Rice plasma membrane, vacuole 19.93 27.45
Os01t0113650-00 Rice mitochondrion, plasma membrane 19.71 26.98
Os03t0838100-01 Rice plasma membrane 25.72 26.92
Os01t0648600-00 Rice plasma membrane 14.48 25.69
Protein Annotations
KEGG:04150+2.7.11.1KEGG:04151+2.7.11.1KEGG:04714+2.7.11.1KEGG:04926+2.7.11.1KEGG:05165+2.7.11.1Gene3D:1.10.510.10
Gene3D:2.90.10.10Gene3D:3.30.200.20EntrezGene:4347249MapMan:50.2.7ProteinID:BAD38273.1ProteinID:BAF25268.1
ProteinID:BAT08418.1InterPro:Bulb-type_lectin_domInterPro:Bulb-type_lectin_dom_sfGO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0004672GO:GO:0004674GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0005623
GO:GO:0005886GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0016020GO:GO:0016021GO:GO:0016301GO:GO:0016310GO:GO:0016740GO:GO:0019538
InterPro:IPR000719InterPro:IPR001480InterPro:IPR036426InterPro:Kinase-like_dom_sfEnsemblPlantsGene:Os09g0454900EnsemblPlants:Os09t0454900-01
PFAM:PF00069PFAM:PF01453PIRSF:PIRSF000641ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011
PFscan:PS50927PANTHER:PTHR27002PANTHER:PTHR27002:SF105InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSUniProt:Q67U98
SMART:SM00108SMART:SM00220InterPro:SRK-like_kinaseSUPFAM:SSF51110SUPFAM:SSF56112InterPro:Ser/Thr_kinase_AS
SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0000426503RefSeq:XP_015612247.1SEG:seg:
Description
Serine/threonine protein kinase-related domain containing protein. (Os09t0454900-01)
Coordinates
chr9:-:17092204..17095317
Molecular Weight (calculated)
94745.7 Da
IEP (calculated)
7.676
GRAVY (calculated)
-0.048
Length
898 amino acids
Sequence
(BLAST)
001: MPPSRSLACL LLPPLLLLLE SVRDADAGPL AVEIVRPSFT ATSYDYVDTG GAFLVSRNGS FRAAVFNPGK QQASFYLAVL HAPSGTPVWS ANRDAPTSST
101: GKVQLSVGGI TVSDANGTVL WSTPPLRSPV AALRLQDTGD LQLLDAGNAT LWRSFDNATD TLLPGQQLLA GAYLSSAKGA TDFSQGDYRF GVITADVLLT
201: WQGSTYWRLS NDARGFKDTN AAVASMSVNA SGLFAVAADG AMVFRVGLAP AEFRMLKLGS DGRLRIISYA LVNSSAPVGG DFIAPAGDCD LPLQCPSLGY
301: CSPAGNGSTC TCPPLFAASV TVAGSCTPGD GSTLASPAAC QNNDSSSGGA SVSYIALKPL TSYFATKFDA PTNTGVNKTA CRALCTASCA CLGFFHDSVS
401: LSCRLIGGKQ LGSLYKGASD TNLGYIKTFN SATKAGSNQI GSSSANHTVP IVLPSVAAFL LLAVLGWYIW WRNKMSKNGR KKKGKSSTMK VYLGRQKSPS
501: RDTGYNADAD DDGGGDDDDI VIPGMPARFS YQEITTMTSN FATKVGSGGF GTVYKGELPG GEGLIAVKKL EAAGVQAKRE FCTEITIIGN IRHVNLVRLR
601: GFCAEGSRRL LVYEYMNRGS LDRSLFGRTG PVLEWGERME VAIGAARGLA YLHTGCEQKI VHCDVKPENI LLANGGQVKI SDFGLAKLMS REQSALFTTM
701: RGTRGYLAPE WISNAAISDR ADVYSFGMVL LELIHGRKNR GEQEAAAPAN NVAVAAGSGE HSDLPSGWSS AMTSTASGTS GGGDEYFPML ALELHEQRRY
801: LDLVDARLEG RVDEAEAART VRVALCCLHE DPALRPSMAT VVRILEGSVP PPEPRVEALG FLRLYGRSYP LPVPGSLTAM AGGGSHLDES LKDTSAPR
Best Arabidopsis Sequence Match ( AT5G35370.1 )
(BLAST)
001: MKSTFLLLLL LLSLNLLFVF VSCASSIEFV YPNFTASNLR FVDSSKGAFL LSRNSIFKAG LFSPGGDDSS TGFYFSVVHV DSGSTIWSSN RDSPVSSSGT
101: MNLTPQGISV IEDGKSQIPV WSTPVLASPV KSLRLTDAGN LLLLDHLNVS LWESFDFPTD SIVLGQRLKL GMFLSGSVSR SDFSTGDYKF LVGESDGLMQ
201: WRGQNYWKLR MHIRANVDSN FPVEYLTVTT SGLALMARNG TVVVVRVALP PSSDFRVAKM DSSGKFIVSR FSGKNLVTEF SGPMDSCQIP FVCGKLGLCN
301: LDNASENQSC SCPDEMRMDA GKGVCVPVSQ SLSLPVSCEA RNISYLELGL GVSYFSTHFT DPVEHGLPLL ACHDICSKNC SCLGVFYENT SRSCYLVKDS
401: FGSLSLVKNS PENHDLIGYV KLSIRKTNAQ PPGNNNRGGS SFPVIALVLL PCSGFFLLIA LGLLWWRRCA VMRYSSIREK QVTRPGSFES GDLGSFHIPG
501: LPQKFEFEEL EQATENFKMQ IGSGGFGSVY KGTLPDETLI AVKKITNHGL HGRQEFCTEI AIIGNIRHTN LVKLRGFCAR GRQLLLVYEY MNHGSLEKTL
601: FSGNGPVLEW QERFDIALGT ARGLAYLHSG CDQKIIHCDV KPENILLHDH FQPKISDFGL SKLLNQEESS LFTTMRGTRG YLAPEWITNA AISEKADVYS
701: YGMVLLELVS GRKNCSFRSR SNSVTEDNNQ NHSSTTTTST GLVYFPLYAL DMHEQGRYME LADPRLEGRV TSQEAEKLVR IALCCVHEEP ALRPTMAAVV
801: GMFEGSIPLG NPRMESLNFL RFYGLRFAES SMVEGQNGES ETMVFHRRES SNSGGSRQSA SYIASQEVSG PR
Arabidopsis Description
G-type lectin S-receptor-like serine/threonine-protein kinase At5g35370 [Source:UniProtKB/Swiss-Prot;Acc:O65238]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.