Factsheet for PGSC0003DMT400070026

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 6
plasma membrane 7
golgi 5
plastid 1
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane, vacuole
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	secretory
ChloroP:	plastid
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	nucleus, plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g015460.2.1	Tomato	endoplasmic reticulum, plasma membrane, vacuole	94.2	95.4
PGSC0003DMT400002386	Potato	plasma membrane	50.8	51.32
GSMUA_Achr9P29120_001	Banana	plasma membrane	37.61	46.69
GSMUA_Achr2P14690_001	Banana	plasma membrane	36.36	46.18
Os12t0640700-01	Rice	cytosol, plasma membrane	26.59	44.49
EES07585	Sorghum	plasma membrane	43.64	43.44
GSMUA_Achr9P27140_001	Banana	plastid	37.61	43.38
Os02t0767400-01	Rice	plasma membrane	43.98	42.76
Zm00001d018185_P001	Maize	plasma membrane	42.84	42.74
Zm00001d018182_P001	Maize	plasma membrane	43.07	42.54
TraesCS6A01G331200.1	Wheat	plasma membrane	42.73	42.44
TraesCS6B01G361900.1	Wheat	plasma membrane	42.84	42.22
HORVU6Hr1G080460.1	Barley	endoplasmic reticulum, plasma membrane	42.84	42.12
TraesCS6D01G310400.1	Wheat	plasma membrane	42.61	42.09
PGSC0003DMT400044735	Potato	cytosol	8.3	41.48
TraesCS5D01G243800.1	Wheat	endoplasmic reticulum, plasma membrane	42.16	40.72
Os09t0454900-01	Rice	plasma membrane	41.48	40.65
EER96846	Sorghum	plasma membrane	41.7	40.6
HORVU5Hr1G068070.1	Barley	plasma membrane	41.82	40.35
TraesCS5A01G237700.1	Wheat	plasma membrane	41.25	39.63
Zm00001d020703_P001	Maize	plasma membrane	40.34	39.23
TraesCS5B01G236200.1	Wheat	plasma membrane	41.93	38.52
EES17510	Sorghum	mitochondrion, plasma membrane	39.2	37.3
Zm00001d031230_P001	Maize	plasma membrane	39.77	36.38
HORVU5Hr1G000240.2	Barley	plasma membrane	39.09	36.02
TraesCS5B01G000800.1	Wheat	plasma membrane	39.55	35.66
TraesCS5D01G001400.1	Wheat	plasma membrane	39.55	35.62
TraesCSU01G136100.1	Wheat	plasma membrane	38.98	35.47
PGSC0003DMT400056565	Potato	plasma membrane	17.61	34.83
PGSC0003DMT400082723	Potato	endoplasmic reticulum, nucleus, plasma membrane, plastid	30.0	34.2
PGSC0003DMT400044506	Potato	plasma membrane	19.43	31.61
PGSC0003DMT400044620	Potato	cytosol	18.41	31.46
PGSC0003DMT400044522	Potato	cytosol, nucleus, plasma membrane	25.91	31.32
PGSC0003DMT400044673	Potato	plasma membrane	27.84	29.45
PGSC0003DMT400044668	Potato	plasma membrane	27.95	29.22
PGSC0003DMT400077643	Potato	plasma membrane	27.61	29.03
PGSC0003DMT400044515	Potato	plasma membrane	27.39	28.86
PGSC0003DMT400073253	Potato	plasma membrane	27.27	28.81
PGSC0003DMT400074356	Potato	cytosol, nucleus, plasma membrane	24.66	28.74
PGSC0003DMT400096753	Potato	plasma membrane	27.05	28.57
PGSC0003DMT400044503	Potato	extracellular, plasma membrane, vacuole	26.59	28.36
PGSC0003DMT400044608	Potato	plasma membrane	26.48	27.71
PGSC0003DMT400044528	Potato	plasma membrane	26.25	27.3
PGSC0003DMT400037904	Potato	plasma membrane, vacuole	14.09	26.11

Protein Annotations

KEGG:04150+2.7.11.1	KEGG:04151+2.7.11.1	KEGG:04714+2.7.11.1	KEGG:04926+2.7.11.1	KEGG:05165+2.7.11.1	Gene3D:1.10.510.10
EntrezGene:102585609	MapMan:18.4.1.24.2	Gene3D:2.90.10.10	Gene3D:3.30.200.20	InterPro:Bulb-type_lectin_dom	InterPro:Bulb-type_lectin_dom_sf
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001480	InterPro:IPR036426	InterPro:Kinase-like_dom_sf	UniProt:M1CLL1
PFAM:PF00069	PFAM:PF01453	EnsemblPlantsGene:PGSC0003DMG400027233	PGSC:PGSC0003DMG400027233	EnsemblPlants:PGSC0003DMT400070026	PIRSF:PIRSF000641
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50927	PANTHER:PTHR27002	PANTHER:PTHR27002:SF112
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00108	SMART:SM00220	InterPro:SRK-like_kinase	SUPFAM:SSF51110
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000296BFAD	RefSeq:XP_006350215.1
SEG:seg	:	:	:	:	:

Description

ATP binding / carbohydrate binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase/ sugar binding [Source:PGSC_GENE;Acc:PGSC0003DMG400027233]

Coordinates

chr4:+:9742827..9746529

Molecular Weight (calculated)

97278.0 Da

IEP (calculated)

6.301

GRAVY (calculated)

-0.124

Length

880 amino acids

Sequence
(BLAST)

001: MGSSFLLFIV TLLLSCFLVH SGPLSLQPLT PNFTASNFKF IDTSGSFLSS PNGTFKAAIT NTKSQERSYY FVIVHSESHV VVWSANRDMP VSDSGELHLS
101: VDGLALFDDS GHTVWSAKRS STSSSVTSMQ LLESGNLVLV DAFNNTVWES FDSPTDTIVV GQRLPVGKSL VSSVNEDEIA KGDYKLVVVE NDAMLQWNGM
201: TYWKLSMEPK AFTDAYTLVE YMMISSNGLF LVGANGTERV IQVILDEVKD PDFRIAKLEE NGHFGVKRFS NGNWMSEFDS PIDSCRVAFT CKKLGVCDEG
301: SCSCPPGFRV SSEVNGSCAP VDRNLVMPVS CNASLNMNVT ELGNRVSYLR LENGMDYFAN DFIEPVKRGV NVSACQDLCS KNCSCLSVFH DQSSGSCYMI
401: ENFLGSILRG SDSGNGRGRL GYVKVISEPS SFDPNDNSSD KRSRLPVVAL VLLPSSGLFL IIVMMAGIMW LMRRKRLMQI SGKEFGRTDS SLFAELDNIS
501: ILGLPVKFDH EEIRVATECF RNQIGTGGFG TVYKGTLSDG AVVAVKKMNA LGAHGNREFC TEIAIIGRVH HVNLVSLKGF CAHRGERFLV YEYMNRGSLD
601: RTLFGLGPAL DWHTRYEIAL GTARGLAYLH GGCEQKIIHC DVKPENILLH DNLQVKISDF GLSKLLNSEQ SSWFTTMRGT RGYLAPEWLT SSAITEKSDV
701: YSYGMVLLEI VRGKKNSSFQ PPNDTTSQSE SSERNRLSPS SLASANQPIY FPLFALEMHE QKKYLELVDP RVLGSVKSEE VEKLVRVALC CLHEEPTLRP
801: TMANVVGMLE GVLPLATPQV QSLNFLRFYG RRFTEASTID GDQEVNVFEL HQQSRNRSST TSSSYNSFSY MSSQQVSGPR

Best Arabidopsis Sequence Match ( AT5G35370.1 )
(BLAST)

001: MKSTFLLLLL LLSLNLLFVF VSCASSIEFV YPNFTASNLR FVDSSKGAFL LSRNSIFKAG LFSPGGDDSS TGFYFSVVHV DSGSTIWSSN RDSPVSSSGT
101: MNLTPQGISV IEDGKSQIPV WSTPVLASPV KSLRLTDAGN LLLLDHLNVS LWESFDFPTD SIVLGQRLKL GMFLSGSVSR SDFSTGDYKF LVGESDGLMQ
201: WRGQNYWKLR MHIRANVDSN FPVEYLTVTT SGLALMARNG TVVVVRVALP PSSDFRVAKM DSSGKFIVSR FSGKNLVTEF SGPMDSCQIP FVCGKLGLCN
301: LDNASENQSC SCPDEMRMDA GKGVCVPVSQ SLSLPVSCEA RNISYLELGL GVSYFSTHFT DPVEHGLPLL ACHDICSKNC SCLGVFYENT SRSCYLVKDS
401: FGSLSLVKNS PENHDLIGYV KLSIRKTNAQ PPGNNNRGGS SFPVIALVLL PCSGFFLLIA LGLLWWRRCA VMRYSSIREK QVTRPGSFES GDLGSFHIPG
501: LPQKFEFEEL EQATENFKMQ IGSGGFGSVY KGTLPDETLI AVKKITNHGL HGRQEFCTEI AIIGNIRHTN LVKLRGFCAR GRQLLLVYEY MNHGSLEKTL
601: FSGNGPVLEW QERFDIALGT ARGLAYLHSG CDQKIIHCDV KPENILLHDH FQPKISDFGL SKLLNQEESS LFTTMRGTRG YLAPEWITNA AISEKADVYS
701: YGMVLLELVS GRKNCSFRSR SNSVTEDNNQ NHSSTTTTST GLVYFPLYAL DMHEQGRYME LADPRLEGRV TSQEAEKLVR IALCCVHEEP ALRPTMAAVV
801: GMFEGSIPLG NPRMESLNFL RFYGLRFAES SMVEGQNGES ETMVFHRRES SNSGGSRQSA SYIASQEVSG PR

Arabidopsis Description

G-type lectin S-receptor-like serine/threonine-protein kinase At5g35370 [Source:UniProtKB/Swiss-Prot;Acc:O65238]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.