Factsheet for TraesCS6D01G310400.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 2
cytosol 1
mitochondrion 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, plastid, secretory
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G331200.1	Wheat	plasma membrane	96.18	96.73
TraesCS6B01G361900.1	Wheat	plasma membrane	96.3	96.08
HORVU6Hr1G080460.1	Barley	endoplasmic reticulum, plasma membrane	94.16	93.74
Zm00001d018185_P001	Maize	plasma membrane	73.96	74.72
EES07585	Sorghum	plasma membrane	74.07	74.66
Zm00001d018182_P001	Maize	plasma membrane	73.96	73.96
Os02t0767400-01	Rice	plasma membrane	75.08	73.92
Bra027975.1-P	Field mustard	plasma membrane	25.36	50.67
CDY42356	Canola	plasma membrane	25.36	50.67
TraesCS5D01G243800.1	Wheat	endoplasmic reticulum, plasma membrane	51.18	50.05
GSMUA_Achr9P27140_001	Banana	plastid	42.65	49.8
KRH53204	Soybean	plasma membrane	45.45	46.29
PGSC0003DMT400002386	Potato	plasma membrane	42.76	43.74
Solyc04g015460.2.1	Tomato	endoplasmic reticulum, plasma membrane, vacuole	41.86	42.92
PGSC0003DMT400070026	Potato	endoplasmic reticulum, plasma membrane, vacuole	42.09	42.61
AT5G35370.1	Thale cress	plasma membrane	41.3	42.2
CDX95197	Canola	plasma membrane	40.74	42.11
TraesCS5D01G001400.1	Wheat	plasma membrane	45.68	41.66
TraesCS3D01G013600.1	Wheat	plastid	16.72	35.31
TraesCS3D01G012800.1	Wheat	plasma membrane	16.27	32.81
TraesCS6D01G386500.1	Wheat	cytosol	19.53	32.71
TraesCS3D01G480200.1	Wheat	mitochondrion	28.06	32.01
TraesCS7D01G231000.1	Wheat	mitochondrion, plasma membrane	30.08	31.87
TraesCS3D01G064800.1	Wheat	cytosol, plasma membrane, plastid	18.74	31.75
TraesCS7D01G086800.1	Wheat	plasma membrane	15.71	31.18
TraesCS5D01G018800.1	Wheat	cytosol	21.89	30.23
TraesCS7D01G368100.1	Wheat	plasma membrane	27.72	29.37
TraesCS5D01G519800.1	Wheat	plasma membrane	27.95	28.89
TraesCS3D01G012900.1	Wheat	plasma membrane	20.99	28.86
TraesCS1D01G014300.1	Wheat	plasma membrane	21.44	28.85
TraesCS3D01G063800.1	Wheat	plasma membrane	20.54	28.59
TraesCS6D01G386200.1	Wheat	plasma membrane	25.93	28.41
TraesCS2D01G419800.1	Wheat	mitochondrion	19.64	28.41
TraesCS3D01G062600.1	Wheat	plasma membrane	20.43	28.17
TraesCS3D01G064700.2	Wheat	plasma membrane	20.31	28.15
TraesCS3D01G062500.1	Wheat	plasma membrane	19.42	27.99
TraesCS2D01G427100.1	Wheat	extracellular, plasma membrane	25.81	27.64
VIT_12s0028g01490.t01	Wine grape	cytosol	3.37	27.27
TraesCS5D01G469700.1	Wheat	plasma membrane	26.6	26.93
TraesCS2D01G419700.1	Wheat	cytosol	19.98	26.85
TraesCS2D01G591000.1	Wheat	plasma membrane	16.61	25.61
TraesCS3D01G062900.1	Wheat	extracellular, plasma membrane, vacuole	9.2	21.69
TraesCS5D01G519600.1	Wheat	cytosol	10.33	19.7

Protein Annotations

KEGG:04150+2.7.11.1	KEGG:04151+2.7.11.1	KEGG:04714+2.7.11.1	KEGG:04926+2.7.11.1	KEGG:05165+2.7.11.1	Gene3D:1.10.510.10
Gene3D:2.90.10.10	Gene3D:3.30.200.20	MapMan:50.2.7	InterPro:Bulb-type_lectin_dom	InterPro:Bulb-type_lectin_dom_sf	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001480	InterPro:IPR003609	InterPro:IPR036426
InterPro:Kinase-like_dom_sf	PFAM:PF00069	PFAM:PF01453	PIRSF:PIRSF000641	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PFscan:PS50847	PFscan:PS50927	PFscan:PS50948	PANTHER:PTHR27002	PANTHER:PTHR27002:SF112
InterPro:Pan_app	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00108	SMART:SM00220	InterPro:SRK-like_kinase
SUPFAM:SSF51110	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS6D01G310400
EnsemblPlants:TraesCS6D01G310400.1	TIGR:cd00028	TIGR:cd01098	TIGR:cd14066	SEG:seg	:

Description

No Description!

Coordinates

chr6D:+:420424436..420427269

Molecular Weight (calculated)

94486.4 Da

IEP (calculated)

7.455

GRAVY (calculated)

-0.093

Length

891 amino acids

Sequence
(BLAST)

001: MGRPSPIRPL LLLVLAWLRR AEAGTVRTEL VTPDFAASYL LFIDTLGVFL RSRSGAFEAA VHGPAGQQDR YYLAVLHAPS GTCVWAANRA APITDRAAPF
101: RLSSAGVSAE DANGTVVWST PPFASPVAAL RLADSGNLAL LDGQNGTLWQ SFDRPTDSLV SSQRLPAGGF LASAASASDL AEGDYRLNVT AADTVLSWMG
201: SLYWRLSGEA IAVKDRDGTV AYMAVNGTGL YLLAADDTVI VQAAMPPAGL RIVQLGVDGK LQISSFASAN SSSSPMDGGT VAPSRGCALP LSCGALGLCT
301: PDGNASICTC PPPFPTAHDN GCAPSVGSTL LPDGYCGGRA GGRPTTSYLS LGSGIAYYAN KFSPPAMAGS NASSCQTLCS SNCSCLGYFY DSSSLSCYLA
401: QHQLASFINT NASNGAGMSG YIKVQSSPRS SPDSSSSNKT LIAILLPTII AFVLVVVVGA FVIASRRRKD EQRVGRRASR SRDVQLRRQR SPGSASAHLV
501: RDLDNDDDGD DDIVIPGLPT RFTHDEIEAM TNSYRTKIGA GGFGAVYKGE LPDGSLVAVK KIEGVGTQGK REFMTEIAVI GNIHHVNLVR LRGFCTEGHR
601: RLLVYEYMNR GSLDRPLFRP AGPLLEWKER VDIAIGAARG LAYLHFGCNQ RIIHCDVKPE NILLADGGQV KIADFGLAKF LTPEQSGLFT TMRGTRGYLA
701: PEWLTNTAIT DRTDVYGFGM VLLELVHGRK NRSEHVSDGA GVGGEDSNSS NGTAGGSSRG GRNDYFPLVA LEGHEGGRYA ELADPRLEGR VVGKEVERMV
801: KVALCCLHED PHTRPSMAVV AGMLEGTMEL GEPRAQALGF LRLYGRGFAG PSEGDVMKQA MVGDRTRSET TMTTMSGWPS YMSSSQLSGA R

Best Arabidopsis Sequence Match ( AT5G35370.1 )
(BLAST)

001: MKSTFLLLLL LLSLNLLFVF VSCASSIEFV YPNFTASNLR FVDSSKGAFL LSRNSIFKAG LFSPGGDDSS TGFYFSVVHV DSGSTIWSSN RDSPVSSSGT
101: MNLTPQGISV IEDGKSQIPV WSTPVLASPV KSLRLTDAGN LLLLDHLNVS LWESFDFPTD SIVLGQRLKL GMFLSGSVSR SDFSTGDYKF LVGESDGLMQ
201: WRGQNYWKLR MHIRANVDSN FPVEYLTVTT SGLALMARNG TVVVVRVALP PSSDFRVAKM DSSGKFIVSR FSGKNLVTEF SGPMDSCQIP FVCGKLGLCN
301: LDNASENQSC SCPDEMRMDA GKGVCVPVSQ SLSLPVSCEA RNISYLELGL GVSYFSTHFT DPVEHGLPLL ACHDICSKNC SCLGVFYENT SRSCYLVKDS
401: FGSLSLVKNS PENHDLIGYV KLSIRKTNAQ PPGNNNRGGS SFPVIALVLL PCSGFFLLIA LGLLWWRRCA VMRYSSIREK QVTRPGSFES GDLGSFHIPG
501: LPQKFEFEEL EQATENFKMQ IGSGGFGSVY KGTLPDETLI AVKKITNHGL HGRQEFCTEI AIIGNIRHTN LVKLRGFCAR GRQLLLVYEY MNHGSLEKTL
601: FSGNGPVLEW QERFDIALGT ARGLAYLHSG CDQKIIHCDV KPENILLHDH FQPKISDFGL SKLLNQEESS LFTTMRGTRG YLAPEWITNA AISEKADVYS
701: YGMVLLELVS GRKNCSFRSR SNSVTEDNNQ NHSSTTTTST GLVYFPLYAL DMHEQGRYME LADPRLEGRV TSQEAEKLVR IALCCVHEEP ALRPTMAAVV
801: GMFEGSIPLG NPRMESLNFL RFYGLRFAES SMVEGQNGES ETMVFHRRES SNSGGSRQSA SYIASQEVSG PR

Arabidopsis Description

G-type lectin S-receptor-like serine/threonine-protein kinase At5g35370 [Source:UniProtKB/Swiss-Prot;Acc:O65238]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.