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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • endoplasmic reticulum 1
  • mitochondrion 2
  • cytosol 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, endoplasmic reticulum, mitochondrion
MultiLoc:endoplasmic reticulum
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS1A01G308700.1
TraesCS1A01G308800.1
TraesCS1B01G319300.1
TraesCS1D01G308000.1
TraesCS2B01G113800.2
TraesCS3A01G184500.1
TraesCS3A01G191900.1
TraesCS3A01G335000.1
TraesCS3B01G219900.1
TraesCS3B01G365900.1
TraesCS3D01G188600.1
TraesCS3D01G194500.2
TraesCS3D01G328300.1
TraesCS4B01G131100.1
TraesCS4D01G126100.1
TraesCS5A01G057100.1
TraesCS5A01G057200.1
TraesCS5A01G139700.1
TraesCS5B01G059900.1
TraesCS5B01G137100.1
TraesCS5D01G068000.1
TraesCS5D01G068100.1
TraesCS5D01G153400.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G34300.1 TraesCS1A01G308700.1 AT2G41100.1 17360592
AT1G34300.1 TraesCS1A01G308800.1 AT2G41100.1 17360592
AT1G34300.1 TraesCS1B01G319300.1 AT2G41100.1 17360592
AT1G34300.1 TraesCS1D01G308000.1 AT2G41100.1 17360592
AT1G34300.1 TraesCS2B01G113800.2 AT2G41100.1 17360592
AT1G34300.1 TraesCS3A01G184500.1 AT2G41100.1 17360592
AT1G34300.1 TraesCS3A01G191900.1 AT2G41100.1 17360592
AT1G34300.1 TraesCS3A01G335000.1 AT2G41100.1 17360592
AT1G34300.1 TraesCS3B01G219900.1 AT2G41100.1 17360592
AT1G34300.1 TraesCS3B01G365900.1 AT2G41100.1 17360592
AT1G34300.1 TraesCS3D01G188600.1 AT2G41100.1 17360592
AT1G34300.1 TraesCS3D01G194500.2 AT2G41100.1 17360592
AT1G34300.1 TraesCS3D01G328300.1 AT2G41100.1 17360592
AT1G34300.1 TraesCS4B01G131100.1 AT2G41100.1 17360592
AT1G34300.1 TraesCS4D01G126100.1 AT2G41100.1 17360592
AT1G34300.1 TraesCS5A01G057100.1 AT2G41100.1 17360592
AT1G34300.1 TraesCS5A01G057200.1 AT2G41100.1 17360592
AT1G34300.1 TraesCS5A01G139700.1 AT2G41100.1 17360592
AT1G34300.1 TraesCS5B01G059900.1 AT2G41100.1 17360592
AT1G34300.1 TraesCS5B01G137100.1 AT2G41100.1 17360592
AT1G34300.1 TraesCS5D01G068000.1 AT2G41100.1 17360592
AT1G34300.1 TraesCS5D01G068100.1 AT2G41100.1 17360592
AT1G34300.1 TraesCS5D01G153400.1 AT2G41100.1 17360592
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS4A01G353100.1 Wheat extracellular 85.44 93.88
HORVU5Hr1G118510.1 Barley endoplasmic reticulum, extracellular, vacuole 85.44 91.3
TraesCS5B01G520400.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 85.01 90.23
TraesCS5D01G519800.1 Wheat plasma membrane 76.66 41.53
Os03t0838100-01 Rice plasma membrane 68.95 37.53
GSMUA_Achr10P... Banana plasma membrane 52.89 35.75
CDX91781 Canola extracellular, plasma membrane, vacuole 44.54 28.61
KRG91776 Soybean plasma membrane 45.61 25.98
VIT_18s0086g00210.t01 Wine grape plasma membrane 46.9 25.8
Bra036747.1-P Field mustard plasma membrane 44.54 25.12
CDY46464 Canola plasma membrane 44.33 25.0
PGSC0003DMT400077643 Potato plasma membrane 44.75 24.97
Solyc11g013880.1.1 Tomato plasma membrane 44.11 24.61
CDY03159 Canola plasma membrane 43.9 24.49
CDY24320 Canola plasma membrane 43.9 24.32
Bra028049.1-P Field mustard plasma membrane 43.04 24.22
KRH70212 Soybean plasma membrane 43.25 24.16
KRH08565 Soybean plasma membrane 42.83 23.95
AT1G34300.1 Thale cress plasma membrane 41.76 23.52
CDX90728 Canola plasma membrane 38.76 23.35
Bra000686.1-P Field mustard plasma membrane 38.12 23.0
VIT_18s0086g00200.t01 Wine grape cytosol 25.05 18.9
TraesCS2D01G591000.1 Wheat plasma membrane 20.56 16.61
TraesCS7D01G368100.1 Wheat plasma membrane 22.48 12.49
TraesCS5D01G469700.1 Wheat plasma membrane 22.06 11.7
TraesCS6D01G386200.1 Wheat plasma membrane 20.34 11.69
TraesCS2D01G427100.1 Wheat extracellular, plasma membrane 20.56 11.54
TraesCS5D01G018800.1 Wheat cytosol 15.85 11.47
TraesCS3D01G480200.1 Wheat mitochondrion 18.63 11.14
TraesCS5D01G243800.1 Wheat endoplasmic reticulum, plasma membrane 20.56 10.54
TraesCS7D01G231000.1 Wheat mitochondrion, plasma membrane 18.84 10.46
TraesCS6D01G310400.1 Wheat plasma membrane 19.7 10.33
TraesCS3D01G062900.1 Wheat extracellular, plasma membrane, vacuole 8.14 10.05
TraesCS5D01G001400.1 Wheat plasma membrane 19.91 9.52
TraesCS1D01G014300.1 Wheat plasma membrane 12.42 8.76
TraesCS6D01G386500.1 Wheat cytosol 8.35 7.33
TraesCS2D01G419700.1 Wheat cytosol 8.14 5.73
TraesCS3D01G064700.2 Wheat plasma membrane 7.71 5.6
TraesCS3D01G012900.1 Wheat plasma membrane 7.71 5.56
TraesCS2D01G419800.1 Wheat mitochondrion 7.28 5.52
TraesCS3D01G063800.1 Wheat plasma membrane 7.49 5.47
TraesCS3D01G062500.1 Wheat plasma membrane 7.07 5.34
TraesCS3D01G062600.1 Wheat plasma membrane 7.07 5.11
TraesCS3D01G064800.1 Wheat cytosol, plasma membrane, plastid 3.64 3.23
TraesCS7D01G086800.1 Wheat plasma membrane 1.5 1.56
TraesCS3D01G012800.1 Wheat plasma membrane 1.07 1.13
TraesCS3D01G013600.1 Wheat plastid 0.86 0.95
Protein Annotations
KEGG:04150+2.7.11.1KEGG:04151+2.7.11.1KEGG:04714+2.7.11.1KEGG:04926+2.7.11.1KEGG:05165+2.7.11.1Gene3D:2.90.10.10
MapMan:35.1InterPro:Bulb-type_lectin_domInterPro:Bulb-type_lectin_dom_sfGO:GO:0000003GO:GO:0007154GO:GO:0008150
GO:GO:0009856GO:GO:0009875GO:GO:0009987GO:GO:0048544InterPro:IPR001480InterPro:IPR003609
InterPro:IPR036426PFAM:PF00954PFAM:PF01453PFAM:PF08276PFscan:PS50927PANTHER:PTHR27002
PANTHER:PTHR27002:SF52InterPro:Pan_appSMART:SM00108SUPFAM:SSF51110InterPro:S_locus_glycoprot_domEnsemblPlantsGene:TraesCS5D01G519600
EnsemblPlants:TraesCS5D01G519600.1SEG:seg::::
Description
No Description!
Coordinates
chr5D:+:540284819..540286222
Molecular Weight (calculated)
49203.1 Da
IEP (calculated)
8.569
GRAVY (calculated)
-0.004
Length
467 amino acids
Sequence
(BLAST)
001: MIWEAELRSF FRCNHHHGGV RGLLPRCRRR KMRPLRGGPG AGADLAVLCC CFLLLSFLSH GADMPLGSSL SPAANSTSWS SPNSTFSLAF VPSPTSRSLF
101: VAAVTYAGGV PVWSAGAGAA VDSRGSLRLS SSGDLQLVKG SGAVLWSSGT AGQGVAAAAL QESGNLVLTN SRGRVLWQSF DHPTDTVVMS QSFTSGMNLT
201: SGPYVFAVDR SGNLTLNWAS AGAAPVTYFN KGYNNSFTAK KTVTLTMQTN GIVSLNDGSL VNPVVVAYSS NYAESGDMLR FLRLDSDGNF RAYSAARGSG
301: TATEQWSAVA DQCQVFGYCG NMGVCSYNRT SPVCGCPSRN FELIDASNPR SGCKRKTELQ NCPGNSTMLQ LDNTQFLTYP PEIAIEQFYV GITACRLNCL
401: AARSCVGATA LSDGSGLCWL KVSNFVSAYQ SASLPSTSFV KVCFPGVPNP PVSTTNAWSP GTSGLHG
Best Arabidopsis Sequence Match ( AT1G34300.1 )
(BLAST)
001: MAVKTPFLKL LPLLLLLLHF PFSFSTIPLG SVIYASGSNQ NWPSPNSTFS VSFVPSPSPN SFLAAVSFAG SVPIWSAGTV DSRGSLRLHT SGSLRLTNGS
101: GTTVWDSKTD RLGVTSGSIE DTGEFILLNN RSVPVWSSFD NPTDTIVQSQ NFTAGKILRS GLYSFQLERS GNLTLRWNTS AIYWNHGLNS SFSSNLSSPR
201: LSLQTNGVVS IFESNLLGGA EIVYSGDYGD SNTFRFLKLD DDGNLRIYSS ASRNSGPVNA HWSAVDQCLV YGYCGNFGIC SYNDTNPICS CPSRNFDFVD
301: VNDRRKGCKR KVELSDCSGN TTMLDLVHTR LFTYEDDPNS ESFFAGSSPC RANCLSSVLC LASVSMSDGS GNCWQKHPGS FFTGYQWPSV PSTSYVKVCG
401: PVVANTLERA TKGDDNNSKV HLWIVAVAVI AGLLGLVAVE IGLWWCCCRK NPRFGTLSSH YTLLEYASGA PVQFTYKELQ RCTKSFKEKL GAGGFGTVYR
501: GVLTNRTVVA VKQLEGIEQG EKQFRMEVAT ISSTHHLNLV RLIGFCSQGR HRLLVYEFMR NGSLDNFLFT TDSAKFLTWE YRFNIALGTA KGITYLHEEC
601: RDCIVHCDIK PENILVDDNF AAKVSDFGLA KLLNPKDNRY NMSSVRGTRG YLAPEWLANL PITSKSDVYS YGMVLLELVS GKRNFDVSEK TNHKKFSIWA
701: YEEFEKGNTK AILDTRLSED QTVDMEQVMR MVKTSFWCIQ EQPLQRPTMG KVVQMLEGIT EIKNPLCPKT ISEVSFSGNS MSTSHASMFV ASGPTRSSSF
801: SATRSFQTMG ITSSGPASTR ISEGSMLGS
Arabidopsis Description
G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300 [Source:UniProtKB/Swiss-Prot;Acc:Q9XID3]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.