Factsheet for TraesCS6A01G331200.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 4
endoplasmic reticulum 5
vacuole 4
plasma membrane 6
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G310400.1	Wheat	plasma membrane	96.73	96.18
TraesCS6B01G361900.1	Wheat	plasma membrane	95.37	94.62
HORVU6Hr1G080460.1	Barley	endoplasmic reticulum, plasma membrane	94.02	93.07
Zm00001d018185_P001	Maize	plasma membrane	74.61	74.94
EES07585	Sorghum	plasma membrane	74.61	74.77
Os02t0767400-01	Rice	plasma membrane	75.73	74.14
Zm00001d018182_P001	Maize	plasma membrane	74.49	74.07
Bra027975.1-P	Field mustard	plasma membrane	25.62	50.9
CDY42356	Canola	plasma membrane	25.62	50.9
GSMUA_Achr9P27140_001	Banana	plastid	43.68	50.72
TraesCS5A01G237700.1	Wheat	plasma membrane	51.92	50.22
KRH53204	Soybean	plasma membrane	45.71	46.29
PGSC0003DMT400002386	Potato	plasma membrane	42.66	43.4
Solyc04g015460.2.1	Tomato	endoplasmic reticulum, plasma membrane, vacuole	42.21	43.04
PGSC0003DMT400070026	Potato	endoplasmic reticulum, plasma membrane, vacuole	42.44	42.73
CDX95197	Canola	plasma membrane	41.2	42.34
AT5G35370.1	Thale cress	plasma membrane	41.42	42.09
TraesCS3A01G063800.1	Wheat	cytosol	8.01	39.89
TraesCS3A01G014700.1	Wheat	cytosol	14.56	38.74
TraesCS3A01G015300.1	Wheat	cytosol	14.9	38.71
TraesCS5A01G458600.1	Wheat	nucleus, plasma membrane, plastid	16.03	33.41
TraesCS4A01G390900.1	Wheat	plasma membrane	17.16	33.26
TraesCS7A01G091000.1	Wheat	plasma membrane	16.93	33.04
TraesCS3A01G015100.1	Wheat	plasma membrane	17.61	32.98
TraesCS3A01G064400.1	Wheat	cytosol	18.62	32.42
TraesCS7A01G230900.1	Wheat	mitochondrion, plasma membrane	30.14	31.86
TraesCS4A01G026200.1	Wheat	cytosol, nucleus, plasma membrane	25.17	31.06
TraesCS7A01G354700.1	Wheat	plastid	24.72	30.85
TraesCS3A01G091800.1	Wheat	endoplasmic reticulum, nucleus, plasma membrane	28.67	30.75
TraesCS3A01G063700.1	Wheat	cytosol, plasma membrane, plastid	18.51	29.5
TraesCS2A01G271900.1	Wheat	plasma membrane	26.07	29.39
TraesCS2A01G580900.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	26.3	29.35
TraesCS3A01G064300.1	Wheat	cytosol	18.4	29.26
TraesCS1A01G017200.1	Wheat	plasma membrane	27.43	29.24
TraesCS4A01G353300.1	Wheat	plasma membrane	27.99	28.67
TraesCS3A01G016300.1	Wheat	plasma membrane	20.65	28.64
TraesCS2A01G429400.1	Wheat	plasma membrane	26.52	28.11
VIT_12s0028g01490.t01	Wine grape	cytosol	3.39	27.27
TraesCS3A01G016100.1	Wheat	cytosol	3.72	26.83
TraesCS4A01G353100.1	Wheat	extracellular	9.82	20.47
TraesCS6A01G402100.1	Wheat	plasma membrane	26.98	14.29

Protein Annotations

KEGG:04150+2.7.11.1	KEGG:04151+2.7.11.1	KEGG:04714+2.7.11.1	KEGG:04926+2.7.11.1	KEGG:05165+2.7.11.1	Gene3D:1.10.510.10
Gene3D:2.90.10.10	Gene3D:3.30.200.20	MapMan:50.2.7	InterPro:Bulb-type_lectin_dom	InterPro:Bulb-type_lectin_dom_sf	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001480	InterPro:IPR003609	InterPro:IPR036426
InterPro:Kinase-like_dom_sf	PFAM:PF00069	PFAM:PF01453	PIRSF:PIRSF000641	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PFscan:PS50927	PFscan:PS50948	PANTHER:PTHR27002	PANTHER:PTHR27002:SF112	InterPro:Pan_app
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00108	SMART:SM00220	InterPro:SRK-like_kinase	SUPFAM:SSF51110
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS6A01G331200	EnsemblPlants:TraesCS6A01G331200.1
TIGR:cd00028	TIGR:cd01098	TIGR:cd14066	SEG:seg	:	:

Description

No Description!

Coordinates

chr6A:+:563402960..563405620

Molecular Weight (calculated)

93902.6 Da

IEP (calculated)

6.951

GRAVY (calculated)

-0.071

Length

886 amino acids

Sequence
(BLAST)

001: MGRPSPIRPH LLLVLLLGVL RSDAGTVRTE LVTPDFAASY LLFIDTLGVF LRSSSGAFEA AVHGPAGQQD RYYLAVLHAP SGTCVWAANR AAPITDRAAP
101: FRLSSAGVSA EDANGTVVWS TPPFASPVAA LRLADSGNLA LLDGQNGTLW QSFDRPTDSL VSSQRLPAGG FLASAVSASD LAEGDYSLNV TAADAVLTWM
201: GSSLYWRLSN DAISIKDREG TVAYMAVNGT GLYLLAADDT VIVQATMPPA GLRIVQLGVD GKLQISSFAS ANSSSSPMDG GIVAPSRGCA LPLSCGALGL
301: CTPDGNASIC TCPPPFPTAH DDGCAPSVGS TLLPDGYCGG RSATSYLSLG SGIAYYANKF SPPAMAGSNA SSCQALCSSN CSCLGYLYDS SSLSCYLAQH
401: QLASFINTNA SNGAGMSGYI KVQSSPRSSS DSSSSNKTLI AILLPTIIAF LLVVVVGAFV IASRRRKDEQ RVGRRASRSR DVQLRRQRSP GSASAHLVRD
501: LDNDDDGDDD IVIPGLPTRF THDEIEAMTN SYRTKIGAGG FGAVYKGELP DGSLVAVKKI EGVGTQGKRE FMTEIAVIGN IHHVNLVRLR GFCTEGHRRL
601: LVYEYMNRGS LDRPLFRPAG PLLEWKERVD IAIGAARGLA YLHFGCNQRI IHCDVKPENI LLADGGQVKI ADFGLAKFLT PEQSGLFTTM RGTRGYLAPE
701: WLTNTAITDR TDVYGFGMVL LELVHGRKNR SEHVSDGGGE DSNSSNGTAG GSSRGGRNDY FPLVALEGHE GGRYAELADP RLEGRVVGKE VERMVKVALC
801: CLHEDPHTRP SMAVVAGMLE GTMELGEPRA QALGFLRLYG RGFAGPSEGN VMKQAMVGDR TRSETTMTTM SGWPSYMSSS QLSGAR

Best Arabidopsis Sequence Match ( AT5G35370.1 )
(BLAST)

001: MKSTFLLLLL LLSLNLLFVF VSCASSIEFV YPNFTASNLR FVDSSKGAFL LSRNSIFKAG LFSPGGDDSS TGFYFSVVHV DSGSTIWSSN RDSPVSSSGT
101: MNLTPQGISV IEDGKSQIPV WSTPVLASPV KSLRLTDAGN LLLLDHLNVS LWESFDFPTD SIVLGQRLKL GMFLSGSVSR SDFSTGDYKF LVGESDGLMQ
201: WRGQNYWKLR MHIRANVDSN FPVEYLTVTT SGLALMARNG TVVVVRVALP PSSDFRVAKM DSSGKFIVSR FSGKNLVTEF SGPMDSCQIP FVCGKLGLCN
301: LDNASENQSC SCPDEMRMDA GKGVCVPVSQ SLSLPVSCEA RNISYLELGL GVSYFSTHFT DPVEHGLPLL ACHDICSKNC SCLGVFYENT SRSCYLVKDS
401: FGSLSLVKNS PENHDLIGYV KLSIRKTNAQ PPGNNNRGGS SFPVIALVLL PCSGFFLLIA LGLLWWRRCA VMRYSSIREK QVTRPGSFES GDLGSFHIPG
501: LPQKFEFEEL EQATENFKMQ IGSGGFGSVY KGTLPDETLI AVKKITNHGL HGRQEFCTEI AIIGNIRHTN LVKLRGFCAR GRQLLLVYEY MNHGSLEKTL
601: FSGNGPVLEW QERFDIALGT ARGLAYLHSG CDQKIIHCDV KPENILLHDH FQPKISDFGL SKLLNQEESS LFTTMRGTRG YLAPEWITNA AISEKADVYS
701: YGMVLLELVS GRKNCSFRSR SNSVTEDNNQ NHSSTTTTST GLVYFPLYAL DMHEQGRYME LADPRLEGRV TSQEAEKLVR IALCCVHEEP ALRPTMAAVV
801: GMFEGSIPLG NPRMESLNFL RFYGLRFAES SMVEGQNGES ETMVFHRRES SNSGGSRQSA SYIASQEVSG PR

Arabidopsis Description

G-type lectin S-receptor-like serine/threonine-protein kinase At5g35370 [Source:UniProtKB/Swiss-Prot;Acc:O65238]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.