Factsheet for TraesCS4A01G353300.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
extracellular 3
endoplasmic reticulum 4
vacuole 3
plasma membrane 5
golgi 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	endoplasmic reticulum
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS1A01G308700.1
TraesCS1A01G308800.1
TraesCS1B01G319300.1
TraesCS1D01G308000.1
TraesCS2B01G113800.2
TraesCS3A01G184500.1
TraesCS3A01G191900.1
TraesCS3A01G335000.1
TraesCS3B01G219900.1
TraesCS3B01G365900.1
TraesCS3D01G188600.1
TraesCS3D01G194500.2
TraesCS3D01G328300.1
TraesCS4B01G131100.1
TraesCS4D01G126100.1
TraesCS5A01G057100.1
TraesCS5A01G057200.1
TraesCS5A01G139700.1
TraesCS5B01G059900.1
TraesCS5B01G137100.1
TraesCS5D01G068000.1
TraesCS5D01G068100.1
TraesCS5D01G153400.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G34300.1	TraesCS1A01G308700.1	AT2G41100.1	17360592
AT1G34300.1	TraesCS1A01G308800.1	AT2G41100.1	17360592
AT1G34300.1	TraesCS1B01G319300.1	AT2G41100.1	17360592
AT1G34300.1	TraesCS1D01G308000.1	AT2G41100.1	17360592
AT1G34300.1	TraesCS2B01G113800.2	AT2G41100.1	17360592
AT1G34300.1	TraesCS3A01G184500.1	AT2G41100.1	17360592
AT1G34300.1	TraesCS3A01G191900.1	AT2G41100.1	17360592
AT1G34300.1	TraesCS3A01G335000.1	AT2G41100.1	17360592
AT1G34300.1	TraesCS3B01G219900.1	AT2G41100.1	17360592
AT1G34300.1	TraesCS3B01G365900.1	AT2G41100.1	17360592
AT1G34300.1	TraesCS3D01G188600.1	AT2G41100.1	17360592
AT1G34300.1	TraesCS3D01G194500.2	AT2G41100.1	17360592
AT1G34300.1	TraesCS3D01G328300.1	AT2G41100.1	17360592
AT1G34300.1	TraesCS4B01G131100.1	AT2G41100.1	17360592
AT1G34300.1	TraesCS4D01G126100.1	AT2G41100.1	17360592
AT1G34300.1	TraesCS5A01G057100.1	AT2G41100.1	17360592
AT1G34300.1	TraesCS5A01G057200.1	AT2G41100.1	17360592
AT1G34300.1	TraesCS5A01G139700.1	AT2G41100.1	17360592
AT1G34300.1	TraesCS5B01G059900.1	AT2G41100.1	17360592
AT1G34300.1	TraesCS5B01G137100.1	AT2G41100.1	17360592
AT1G34300.1	TraesCS5D01G068000.1	AT2G41100.1	17360592
AT1G34300.1	TraesCS5D01G068100.1	AT2G41100.1	17360592
AT1G34300.1	TraesCS5D01G153400.1	AT2G41100.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G520600.1	Wheat	plasma membrane	97.92	98.03
TraesCS5D01G519800.1	Wheat	plasma membrane	97.34	97.68
HORVU5Hr1G118460.1	Barley	plasma membrane	96.42	96.53
HORVU2Hr1G106300.1	Barley	extracellular	34.1	82.63
OQU90662	Sorghum	plasma membrane	81.04	82.28
HORVU2Hr1G020630.1	Barley	cytosol, plastid	33.64	81.74
Zm00001d034781_P001	Maize	endoplasmic reticulum	80.46	81.69
TraesCS4A01G353100.1	Wheat	extracellular	40.0	81.41
GSMUA_Achr10P...	Banana	plasma membrane	57.57	72.07
VIT_18s0086g00200.t01	Wine grape	cytosol	47.05	65.75
VIT_18s0086g00210.t01	Wine grape	plasma membrane	60.23	61.37
CDX91781	Canola	extracellular, plasma membrane, vacuole	51.33	61.07
PGSC0003DMT400077643	Potato	plasma membrane	58.27	60.22
KRH08565	Soybean	plasma membrane	57.92	60.0
Solyc11g013880.1.1	Tomato	plasma membrane	58.03	59.98
KRH70212	Soybean	plasma membrane	57.8	59.81
CDY46464	Canola	plasma membrane	56.42	58.94
Bra036747.1-P	Field mustard	plasma membrane	56.42	58.94
KRG91776	Soybean	plasma membrane	55.61	58.66
Bra028049.1-P	Field mustard	plasma membrane	55.84	58.19
CDY24320	Canola	plasma membrane	56.42	57.89
CDY03159	Canola	plasma membrane	55.61	57.47
AT1G34300.1	Thale cress	plasma membrane	53.99	56.33
CDX90728	Canola	plasma membrane	50.4	56.26
Bra000686.1-P	Field mustard	plasma membrane	49.83	55.68
TraesCS3A01G015300.1	Wheat	cytosol	14.91	37.83
TraesCS3A01G063800.1	Wheat	cytosol	7.75	37.64
TraesCS3A01G014700.1	Wheat	cytosol	14.45	37.54
TraesCS7A01G091000.1	Wheat	plasma membrane	18.15	34.58
TraesCS4A01G390900.1	Wheat	plasma membrane	18.15	34.35
TraesCS5A01G458600.1	Wheat	nucleus, plasma membrane, plastid	16.65	33.88
TraesCS4A01G026200.1	Wheat	cytosol, nucleus, plasma membrane	26.47	31.89
TraesCS3A01G015100.1	Wheat	plasma membrane	17.11	31.29
TraesCS7A01G354700.1	Wheat	plastid	25.55	31.13
TraesCS7A01G230900.1	Wheat	mitochondrion, plasma membrane	29.36	30.31
TraesCS2A01G580900.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	27.51	29.97
TraesCS3A01G064400.1	Wheat	cytosol	17.34	29.47
TraesCS3A01G091800.1	Wheat	endoplasmic reticulum, nucleus, plasma membrane	28.09	29.42
TraesCS3A01G064300.1	Wheat	cytosol	18.73	29.08
TraesCS2A01G429400.1	Wheat	plasma membrane	27.51	28.47
TraesCS3A01G063700.1	Wheat	cytosol, plasma membrane, plastid	18.15	28.24
TraesCS6A01G331200.1	Wheat	plasma membrane	28.67	27.99
TraesCS2A01G271900.1	Wheat	plasma membrane	25.43	27.99
TraesCS5A01G237700.1	Wheat	plasma membrane	29.6	27.95
TraesCS1A01G017200.1	Wheat	plasma membrane	26.59	27.68
TraesCS3A01G016300.1	Wheat	plasma membrane	19.08	25.82
TraesCS3A01G016100.1	Wheat	cytosol	2.89	20.33
TraesCS6A01G402100.1	Wheat	plasma membrane	27.75	14.35

Protein Annotations

KEGG:04150+2.7.11.1	KEGG:04151+2.7.11.1	KEGG:04714+2.7.11.1	KEGG:04926+2.7.11.1	KEGG:05165+2.7.11.1	Gene3D:1.10.510.10
MapMan:18.4.1.24.2	Gene3D:2.90.10.10	Gene3D:3.30.200.20	InterPro:Bulb-type_lectin_dom	InterPro:Bulb-type_lectin_dom_sf	GO:GO:0000003
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488
GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0008150	GO:GO:0008152
GO:GO:0009856	GO:GO:0009875	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
GO:GO:0048544	InterPro:IPR000719	InterPro:IPR001480	InterPro:IPR003609	InterPro:IPR036426	InterPro:Kinase-like_dom_sf
PFAM:PF00069	PFAM:PF00954	PFAM:PF01453	PFAM:PF08276	PIRSF:PIRSF000641	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50927	PANTHER:PTHR27002	PANTHER:PTHR27002:SF52	InterPro:Pan_app
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00108	SMART:SM00220	InterPro:SRK-like_kinase	SUPFAM:SSF51110
SUPFAM:SSF56112	InterPro:S_locus_glycoprot_dom	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	EnsemblPlantsGene:TraesCS4A01G353300	EnsemblPlants:TraesCS4A01G353300.1
TIGR:cd00028	TIGR:cd14066	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr4A:+:628483735..628486623

Molecular Weight (calculated)

92088.8 Da

IEP (calculated)

7.356

GRAVY (calculated)

-0.094

Length

865 amino acids

Sequence
(BLAST)

001: MRPSRGDLAV LCRCFLLLLL PFLSHGKDMP LGSTLSPGGN SAAWSSPNST FSLAFAPSPT APSLSVAAVT YAGGISVWSA GAGAPVDSGG SLRLSSTGDL
101: QLVNGSGAVL WSSGTAGQGV SAAALQESGN LVLKNSTGGA LWQSFDHPTD TVVMSQNFAS GMNLTSGPYV FAVDRATGNL TLRWATAGSA TVTYFNKGYN
201: STFTANKTLS SPTLTMQTNG IVSLTDGTLN APVVVAYSSN YGESGDMLRF VRLDSDGNFR AYSAGRGSGT ATEQWSAVAD QCEVFGYCGN MGVCGYNGTS
301: PVCGCPSRNF QLNDASNPRS GCKRKVELQN CPGNSTMLQL DNTQFLTYTP EITTEQFFVG ITACRLNCLS GSSCVASTAL SDGSGLCFLK VSNFVSAYQS
401: ASLPSTSFVK VCFPGEPNPP LSTGDSSSSG SSGLRGWVVA LVVLGVVSGL VLAEWALWWV FCRNSPKYGP ASAQYALLEY ASGAPVQFSY RELQRSTKGF
501: KEKLGAGGFG AVYRGVLANR TVVAVKQLEG IEQGEKQFRM EVATISSTHH LNLVRLIGFC SEGRHRLLVY EFMKNGSLDS FLFGAGNSNS NDSGKAMSWA
601: TRFAVAVGTA RGITYLHEEC RDTIVHCDIK PENILLDEQH NAKVSDFGLA KLINPKDHRH RTLTSVRGTR GYLAPEWLAN LPITVKSDVY SYGMVLLETV
701: SGHRNFDISE ETNRKKFSVW AYEEYEKGNL LPIVDRRLAG EEVDMAQVER ALQVSFWCIQ EQPSQRPTMG KVVQMLEGIM ELERPPPPKS SDSFMTVTTA
801: TTGGGSGSGV SSSVASTFAS SVAAPPAPVP SPNVEQEMSV GRSASARTRE IASLPLRSSE PYMTM

Best Arabidopsis Sequence Match ( AT1G34300.1 )
(BLAST)

001: MAVKTPFLKL LPLLLLLLHF PFSFSTIPLG SVIYASGSNQ NWPSPNSTFS VSFVPSPSPN SFLAAVSFAG SVPIWSAGTV DSRGSLRLHT SGSLRLTNGS
101: GTTVWDSKTD RLGVTSGSIE DTGEFILLNN RSVPVWSSFD NPTDTIVQSQ NFTAGKILRS GLYSFQLERS GNLTLRWNTS AIYWNHGLNS SFSSNLSSPR
201: LSLQTNGVVS IFESNLLGGA EIVYSGDYGD SNTFRFLKLD DDGNLRIYSS ASRNSGPVNA HWSAVDQCLV YGYCGNFGIC SYNDTNPICS CPSRNFDFVD
301: VNDRRKGCKR KVELSDCSGN TTMLDLVHTR LFTYEDDPNS ESFFAGSSPC RANCLSSVLC LASVSMSDGS GNCWQKHPGS FFTGYQWPSV PSTSYVKVCG
401: PVVANTLERA TKGDDNNSKV HLWIVAVAVI AGLLGLVAVE IGLWWCCCRK NPRFGTLSSH YTLLEYASGA PVQFTYKELQ RCTKSFKEKL GAGGFGTVYR
501: GVLTNRTVVA VKQLEGIEQG EKQFRMEVAT ISSTHHLNLV RLIGFCSQGR HRLLVYEFMR NGSLDNFLFT TDSAKFLTWE YRFNIALGTA KGITYLHEEC
601: RDCIVHCDIK PENILVDDNF AAKVSDFGLA KLLNPKDNRY NMSSVRGTRG YLAPEWLANL PITSKSDVYS YGMVLLELVS GKRNFDVSEK TNHKKFSIWA
701: YEEFEKGNTK AILDTRLSED QTVDMEQVMR MVKTSFWCIQ EQPLQRPTMG KVVQMLEGIT EIKNPLCPKT ISEVSFSGNS MSTSHASMFV ASGPTRSSSF
801: SATRSFQTMG ITSSGPASTR ISEGSMLGS

Arabidopsis Description

G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300 [Source:UniProtKB/Swiss-Prot;Acc:Q9XID3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.