Factsheet for PGSC0003DMT400074356

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, nucleus, cytosol

Predictor Summary:

nucleus 3
plasma membrane 2
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g036470.1.1	Tomato	plasma membrane	91.39	83.54
VIT_16s0050g01920.t01	Wine grape	cytosol, mitochondrion, nucleus, plastid	69.27	70.11
VIT_16s0050g01880.t01	Wine grape	plasma membrane	75.63	66.63
KRG94132	Soybean	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	33.38	66.49
KRH35213	Soybean	plasma membrane	75.23	65.82
KRG91610	Soybean	plasma membrane	74.04	64.77
AT5G24080.2	Thale cress	plasma membrane	68.08	58.95
Bra009730.1-P	Field mustard	plasma membrane	67.55	57.95
CDX88071	Canola	plasma membrane	67.55	57.95
CDX80409	Canola	plasma membrane	65.3	57.86
CDX80408	Canola	cytosol	43.84	56.29
GSMUA_Achr4P02510_001	Banana	plasma membrane	47.95	49.86
PGSC0003DMT400044735	Potato	cytosol	9.14	39.2
PGSC0003DMT400056565	Potato	plasma membrane	20.79	35.28
PGSC0003DMT400044506	Potato	plasma membrane	24.77	34.57
PGSC0003DMT400044620	Potato	cytosol	22.12	32.43
PGSC0003DMT400082723	Potato	endoplasmic reticulum, nucleus, plasma membrane, plastid	32.72	31.99
PGSC0003DMT400077643	Potato	plasma membrane	34.7	31.3
PGSC0003DMT400044522	Potato	cytosol, nucleus, plasma membrane	30.07	31.18
PGSC0003DMT400044673	Potato	plasma membrane	30.33	27.52
PGSC0003DMT400096753	Potato	plasma membrane	29.93	27.13
PGSC0003DMT400044668	Potato	plasma membrane	30.2	27.08
PGSC0003DMT400044515	Potato	plasma membrane	29.93	27.07
PGSC0003DMT400044608	Potato	plasma membrane	29.8	26.75
PGSC0003DMT400044528	Potato	plasma membrane	29.67	26.48
PGSC0003DMT400044503	Potato	extracellular, plasma membrane, vacuole	28.48	26.06
PGSC0003DMT400073253	Potato	plasma membrane	28.48	25.81
PGSC0003DMT400002386	Potato	plasma membrane	29.01	25.14
PGSC0003DMT400070026	Potato	endoplasmic reticulum, plasma membrane, vacuole	28.74	24.66
PGSC0003DMT400037904	Potato	plasma membrane, vacuole	14.7	23.37

Protein Annotations

KEGG:04150+2.7.11.1	KEGG:04151+2.7.11.1	KEGG:04714+2.7.11.1	KEGG:04926+2.7.11.1	KEGG:05165+2.7.11.1	Gene3D:1.10.510.10
MapMan:18.4.1.24.2	Gene3D:2.90.10.10	Gene3D:3.30.200.20	InterPro:Bulb-type_lectin_dom	InterPro:Bulb-type_lectin_dom_sf	GO:GO:0000003
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0008150
GO:GO:0008152	GO:GO:0009856	GO:GO:0009875	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	GO:GO:0048544	InterPro:IPR000719
InterPro:IPR001480	InterPro:IPR036426	InterPro:Kinase-like_dom_sf	UniProt:M1CTK0	PFAM:PF00069	PFAM:PF00954
PFAM:PF01453	EnsemblPlantsGene:PGSC0003DMG401028902	PGSC:PGSC0003DMG401028902	EnsemblPlants:PGSC0003DMT400074356	PIRSF:PIRSF000641	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50927	PANTHER:PTHR27002	PANTHER:PTHR27002:SF339	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	InterPro:SRK-like_kinase	SUPFAM:SSF51110	SUPFAM:SSF56112	InterPro:S_locus_glycoprot_dom
InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix	UniParc:UPI0002952E06	SEG:seg	:	:

Description

ATP binding protein [Source:PGSC_GENE;Acc:PGSC0003DMG401028902]

Coordinates

chr6:+:38024939..38027902

Molecular Weight (calculated)

83417.0 Da

IEP (calculated)

6.242

GRAVY (calculated)

-0.213

Length

755 amino acids

Sequence
(BLAST)

001: MDGDTTVWAS NTSEAGVELA VMSENGNFIL YSTNLSTIAW QSFSHPSDTL LPGQSLTVSL ELTSSKLPSH GGYYTLKMLQ QPTSLSLALT YNVPNYYDSS
101: PEFYSNFSYW SGPEISNVTG DVTAVLDKAG SFGIVYGSSS DGAVYVYKND GDYGGLSSAV NQTNSNVPSI LRRLTLEVNG NLRLYRWDND VNGSRQWVPE
201: WAAVSNPCDI SGVCGNGICN LDRSKTNASC TCLPGTSTEG DDVSCSGNPS VTGKCGPQHE NMMSQFKIST VQKTNYYFSE SSVIGNYSDK GSLSKCGDAC
301: LSNCGCVASV YGLSEEKAYC WLLRSLEFGG FEDPVSTLFV KVEANASVSE KPGNSSDESK SRHDKVLVLP IVLSMTVLIL LLCCLLYINI HRRRSMRRAL
401: EGSLLLSGAP ISFSYRDLQC WTNNFSELLG TGGFGSVYKG SLKDATLIAV KKLDKVSPHG EKEFITEVKT IGSMHHLNLV RLCGYCSEGT QRLLVYEYMK
501: NSSLDKWIFH SFSTRNRLLD WASRFRIAVG TAQGIAYFHE QCRNRIIHCD IKPENILLDE NFCPKVSDFG LAKLMGREHS HVVTMIRGTR GYLAPEWVSN
601: RPITVKADVY SYGMLLLEII GGRRNLDMTC DADDFFYPGW AYKEMTSGTP VKVVDRRLRG AVEEKEVTRA LMVAFWCIQD EVSNRPSMGE VVKMLEGSVD
701: MNMPPMPQTV LELIEEGLDQ VYKAMKRELN QYSSFSIATH PSSNATCSHS SMSPR

Best Arabidopsis Sequence Match ( AT5G24080.2 )
(BLAST)

001: MSSFHFYFPS VGLFSFFCFF LVSLATEPHI GLGSKLKASE PNRAWVSANG TFAIGFTRFK PTDRFLLSIW FAQLPGDPTI VWSPNRNSPV TKEAVLELEA
101: TGNLVLSDQN TVVWTSNTSN HGVESAVMSE SGNFLLLGTE VTAGPTIWQS FSQPSDTLLP NQPLTVSLEL TSNPSPSRHG HYSLKMLQQH TSLSLGLTYN
201: INLDPHANYS YWSGPDISNV TGDVTAVLDD TGSFKIVYGE SSIGAVYVYK NPVDDNRNYN NSSNLGLTKN PVLRRLVLEN NGNLRLYRWD NDMNGSSQWV
301: PEWAAVSNPC DIAGICGNGV CNLDRTKKNA DCLCLPGSVK LPDQENAKLC SDNSSLVQEC ESNINRNGSF KISTVQETNY YFSERSVIEN ISDISNVRKC
401: GEMCLSDCKC VASVYGLDDE KPYCWILKSL NFGGFRDPGS TLFVKTRANE SYPSNSNNND SKSRKSHGLR QKVLVIPIVV GMLVLVALLG MLLYYNLDRK
501: RTLKRAAKNS LILCDSPVSF TYRDLQNCTN NFSQLLGSGG FGTVYKGTVA GETLVAVKRL DRALSHGERE FITEVNTIGS MHHMNLVRLC GYCSEDSHRL
601: LVYEYMINGS LDKWIFSSEQ TANLLDWRTR FEIAVATAQG IAYFHEQCRN RIIHCDIKPE NILLDDNFCP KVSDFGLAKM MGREHSHVVT MIRGTRGYLA
701: PEWVSNRPIT VKADVYSYGM LLLEIVGGRR NLDMSYDAED FFYPGWAYKE LTNGTSLKAV DKRLQGVAEE EEVVKALKVA FWCIQDEVSM RPSMGEVVKL
801: LEGTSDEINL PPMPQTILEL IEEGLEDVYR AMRREFNNQL SSLTVNTITT SQSYRSSSRS HATCSYSSMS PR

Arabidopsis Description

G-type lectin S-receptor-like serine/threonine-protein kinase At5g24080 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLV4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.