Factsheet for PGSC0003DMT400082723

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plastid, nucleus, plasma membrane

Predictor Summary:

nucleus 3
plastid 1
cytosol 1
endoplasmic reticulum 2
plasma membrane 3
extracellular 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, nucleus, plasma membrane, plastid
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
ChloroP:	plastid
EpiLoc:	cytosol
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	nucleus, plasma membrane
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc08g059730.1.1	Tomato	plasma membrane	96.63	92.33
Bra040074.1-P	Field mustard	cytosol	17.62	76.4
VIT_04s0008g05500.t01	Wine grape	cytosol, nucleus, plasma membrane	65.03	63.54
KRH52432	Soybean	endoplasmic reticulum, plasma membrane, vacuole	66.97	63.28
KRH61766	Soybean	extracellular, plasma membrane	65.93	62.38
KRH15882	Soybean	plasma membrane	63.08	60.12
TraesCS7B01G196400.2	Wheat	cytosol, endoplasmic reticulum, plasma membrane, plastid	50.39	60.03
KRH05175	Soybean	plasma membrane	62.95	59.85
GSMUA_Achr7P10190_001	Banana	plasma membrane	52.46	59.04
CDX75235	Canola	endoplasmic reticulum, plasma membrane	61.79	58.89
AT4G32300.1	Thale cress	plasma membrane	62.31	58.59
CDX72354	Canola	plasma membrane	61.01	57.23
CDY13481	Canola	plasma membrane	60.49	56.81
Bra023955.1-P	Field mustard	plasma membrane	60.23	56.64
CDY23321	Canola	plasma membrane	60.49	56.54
OQU76372	Sorghum	plasma membrane	59.97	55.25
Os06t0494100-02	Rice	mitochondrion	59.33	54.2
Zm00001d045950_P003	Maize	cytosol, endoplasmic reticulum, plasma membrane	59.33	53.95
TraesCS7D01G231000.1	Wheat	mitochondrion, plasma membrane	58.16	53.39
TraesCS7A01G230900.1	Wheat	mitochondrion, plasma membrane	57.51	52.98
HORVU7Hr1G047150.8	Barley	mitochondrion, plasma membrane	56.99	50.69
TraesCS3D01G480200.1	Wheat	mitochondrion	50.0	49.42
TraesCS3A01G091800.1	Wheat	endoplasmic reticulum, nucleus, plasma membrane	50.65	47.34
CDY39882	Canola	plasma membrane	49.48	46.08
PGSC0003DMT400044735	Potato	cytosol	10.36	45.45
TraesCS3B01G107000.1	Wheat	plasma membrane	48.83	43.58
CDX68834	Canola	plasma membrane	54.4	42.77
PGSC0003DMT400044506	Potato	plasma membrane	25.52	36.41
PGSC0003DMT400044620	Potato	cytosol	23.7	35.53
PGSC0003DMT400056565	Potato	plasma membrane	20.47	35.51
PGSC0003DMT400044522	Potato	cytosol, nucleus, plasma membrane	33.42	35.44
PGSC0003DMT400044673	Potato	plasma membrane	36.14	33.53
PGSC0003DMT400074356	Potato	cytosol, nucleus, plasma membrane	31.99	32.72
PGSC0003DMT400044515	Potato	plasma membrane	34.84	32.22
PGSC0003DMT400044503	Potato	extracellular, plasma membrane, vacuole	34.07	31.88
PGSC0003DMT400044608	Potato	plasma membrane	34.72	31.87
PGSC0003DMT400044668	Potato	plasma membrane	34.46	31.59
PGSC0003DMT400044528	Potato	plasma membrane	34.59	31.56
PGSC0003DMT400002386	Potato	plasma membrane	35.49	31.46
PGSC0003DMT400096753	Potato	plasma membrane	33.81	31.33
PGSC0003DMT400077643	Potato	plasma membrane	32.77	30.23
PGSC0003DMT400070026	Potato	endoplasmic reticulum, plasma membrane, vacuole	34.2	30.0
PGSC0003DMT400073253	Potato	plasma membrane	32.12	29.77
Bra011337.1-P	Field mustard	plasma membrane	54.92	26.6
PGSC0003DMT400037904	Potato	plasma membrane, vacuole	15.54	25.26

Protein Annotations

KEGG:04150+2.7.11.1	KEGG:04151+2.7.11.1	KEGG:04714+2.7.11.1	KEGG:04926+2.7.11.1	KEGG:05165+2.7.11.1	Gene3D:1.10.510.10
MapMan:18.4.1.24.2	Gene3D:2.90.10.10	Gene3D:3.30.200.20	InterPro:Bulb-type_lectin_dom	InterPro:Bulb-type_lectin_dom_sf	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:IPR001480	InterPro:IPR036426	InterPro:Kinase-like_dom_sf	UniProt:M1D656	PFAM:PF00069
PFAM:PF01453	EnsemblPlantsGene:PGSC0003DMG400032782	PGSC:PGSC0003DMG400032782	EnsemblPlants:PGSC0003DMT400082723	PIRSF:PIRSF000641	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50927	PANTHER:PTHR27002	PANTHER:PTHR27002:SF31	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00108	SMART:SM00220	InterPro:SRK-like_kinase	SUPFAM:SSF51110	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix	UniParc:UPI0002969911	SEG:seg	:	:

Description

S-receptor kinase [Source:PGSC_GENE;Acc:PGSC0003DMG400032782]

Coordinates

chr8:-:16249820..16252932

Molecular Weight (calculated)

84210.8 Da

IEP (calculated)

5.986

GRAVY (calculated)

-0.230

Length

772 amino acids

Sequence
(BLAST)

001: MTWIDNDGLI LVSNSSKFAF GFNPTNDVTL FLLVVIHVSS STIVWSANRD SPVRNNDNFV FDDTGNANLQ SGKSTIWSTN TADKGVSAME LKDSGNLILV
101: GKDGSVIWES FTHPVDTLLS GQNFTQGMKL VSTPNNNNLS YSLEFKSGDM VLSASFQPPQ PYWAMGKDDR RTINQVGGGV TSAILDGNAW KIYGEKRVLL
201: WQFIFPDDKY PNATRLAVLG EDGSITFSIL QDESKLDSGT RIPQDECSRP DSCDPYFICY SGNKCQCPSA LPSCKPETAS FCNKDVELVD AGDSLGYFAL
301: GFVSPSAKTD LNGCKASCVG NCSCAAMFFD STSGNCFMFD QIGSLQGSVN GAGFKSYIKV SASQGNGDSG GGGGGGKGRL PIVFGIVISS AIVILGLIYG
401: GIRYQRRKNN KMPDSAKGSS EEDNFLEGLS GMPIRFSYKE LQNATNNFSI KLGQGGFGSV YQGVLPDGTR LAVKKLEGIG QGKKEFRAEV SIIGSIHHLH
501: LVRLRGFCAE GTHRLLAYEY MGNGSLEKWL FKKNKEFLLD WDTRFNIALG TAKGLAYLHE DCDVKIVHCD IKPENVLLDD HFLAKVSDFG LAKLMTREQS
601: HVFTTMRGTR GYLAPEWITN YAISEKSDVF SYGMVLLEII GGRKNYDPSQ SSEKSHFPSY AFRMMEEGKL EDLIDRNLKV EEEDERVSIA IKVALWCIQD
701: DMSLRPSMAK VVQMLEGISH VPSPPTASQM GSRLFSSYLK SLSGEGTSSG TSAPSDCNSD AYLSAVRLSG PR

Best Arabidopsis Sequence Match ( AT4G32300.1 )
(BLAST)

001: MRGVFIVIVT CLVFLPDPLR AGVASIGSIT PGFGGSQMNY INNDGIFLES NNSAFGFGFV TTQDSVTLFT LSIIHKSSTK LIWSANRASP VSNSDKFVFD
101: DNGNVVMEGT EVWRLDNSGK NASRIELRDS GNLVVVSVDG TSIWESFDHP TDTLITNQAF KEGMKLTSSP SSSNMTYALE IKSGDMVLSV NSLTPQVYWS
201: MANARERIIN KDGGVVTSSS LLGNSWRFFD QKQVLLWQFV FSDNKDDNTT WIAVLGNNGV ISFSNLGSGA SAADSSTKIP SDLCGTPEPC GPYYVCSGSK
301: VCGCVSGLSR ARSDCKTGIT SPCKKTKDNA TLPLQLVSAG DGVDYFALGY APPFSKKTDL DSCKEFCHNN CSCLGLFFQN SSGNCFLFDY IGSFKTSGNG
401: GSGFVSYIKI ASTGSGGGDN GEDDGKHFPY VVIIVVVTVF IIAVLIFVAF RIHKRKKMIL EAPQESSEED NFLENLSGMP IRFAYKDLQS ATNNFSVKLG
501: QGGFGSVYEG TLPDGSRLAV KKLEGIGQGK KEFRAEVSII GSIHHLHLVR LRGFCAEGAH RLLAYEFLSK GSLERWIFRK KDGDVLLDWD TRFNIALGTA
601: KGLAYLHEDC DARIVHCDIK PENILLDDNF NAKVSDFGLA KLMTREQSHV FTTMRGTRGY LAPEWITNYA ISEKSDVYSY GMVLLELIGG RKNYDPSETS
701: EKCHFPSFAF KKMEEGKLMD IVDGKMKNVD VTDERVQRAM KTALWCIQED MQTRPSMSKV VQMLEGVFPV VQPPSSSTMG SRLYSSFFKS ISEDGGATTS
801: SGPSDCNSEN YLSAVRLSGP R

Arabidopsis Description

SD25G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWZ5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.