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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 6
  • golgi 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY23321 Canola plasma membrane 85.19 83.54
CDY13481 Canola plasma membrane 84.32 83.09
AT4G32300.1 Thale cress plasma membrane 83.83 82.7
CDX72354 Canola plasma membrane 83.83 82.5
CDX68834 Canola plasma membrane 86.05 70.98
CDY39882 Canola plasma membrane 64.57 63.09
VIT_04s0008g05500.t01 Wine grape cytosol, nucleus, plasma membrane 60.99 62.53
PGSC0003DMT400082723 Potato endoplasmic reticulum, nucleus, plasma membrane, plastid 58.89 61.79
Solyc08g059730.1.1 Tomato plasma membrane 59.88 60.02
KRH52432 Soybean endoplasmic reticulum, plasma membrane, vacuole 60.49 59.98
KRH61766 Soybean extracellular, plasma membrane 59.75 59.31
KRH05175 Soybean plasma membrane 59.26 59.11
KRH15882 Soybean plasma membrane 58.89 58.89
TraesCS7B01G196400.2 Wheat cytosol, endoplasmic reticulum, plasma membrane, plastid 45.93 57.41
GSMUA_Achr7P10190_001 Banana plasma membrane 46.54 54.96
OQU76372 Sorghum plasma membrane 54.57 52.74
TraesCS7D01G231000.1 Wheat mitochondrion, plasma membrane 53.83 51.84
TraesCS7A01G230900.1 Wheat mitochondrion, plasma membrane 53.58 51.79
Os06t0494100-02 Rice mitochondrion 53.95 51.72
Zm00001d045950_P003 Maize cytosol, endoplasmic reticulum, plasma membrane 54.07 51.59
KRH23578 Soybean endoplasmic reticulum, plasma membrane 50.37 50.18
KRH09726 Soybean plasma membrane 50.37 50.12
HORVU7Hr1G047150.8 Barley mitochondrion, plasma membrane 53.21 49.65
TraesCS3D01G480200.1 Wheat mitochondrion 46.54 48.27
VIT_09s0002g06830.t01 Wine grape plasma membrane 52.84 47.77
Bra011337.1-P Field mustard plasma membrane 90.25 45.86
TraesCS3A01G091800.1 Wheat endoplasmic reticulum, nucleus, plasma membrane 45.56 44.67
VIT_11s0016g05440.t01 Wine grape plasma membrane 42.47 42.36
TraesCS3B01G107000.1 Wheat plasma membrane 43.83 41.04
CDY42356 Canola plasma membrane 20.86 37.89
CDX70909 Canola plasma membrane 18.64 34.32
CDX90728 Canola plasma membrane 29.75 31.1
CDX95197 Canola plasma membrane 32.96 30.97
CDX91781 Canola extracellular, plasma membrane, vacuole 27.78 30.95
CDY03159 Canola plasma membrane 31.98 30.94
CDY24320 Canola plasma membrane 31.85 30.61
CDY46464 Canola plasma membrane 30.86 30.19
CDX80409 Canola plasma membrane 31.23 29.69
CDX88071 Canola plasma membrane 31.6 29.09
CDX80408 Canola cytosol 20.37 28.06
CDY45109 Canola plasma membrane 19.75 22.35
CDX88861 Canola endoplasmic reticulum 16.91 9.75
CDX70911 Canola mitochondrion 0.0 0.0
Protein Annotations
KEGG:04150+2.7.11.1KEGG:04151+2.7.11.1KEGG:04714+2.7.11.1KEGG:04926+2.7.11.1KEGG:05165+2.7.11.1Gene3D:1.10.510.10
MapMan:18.4.1.24.2Gene3D:2.90.10.10Gene3D:3.30.200.20Gene3D:3.50.4.10GO:A0A078CED5InterPro:Bulb-type_lectin_dom
InterPro:Bulb-type_lectin_dom_sfEnsemblPlants:CDX75235ProteinID:CDX75235ProteinID:CDX75235.1GO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0004672GO:GO:0004674GO:GO:0005488GO:GO:0005524GO:GO:0006464
GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016301GO:GO:0016740
GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00121093001InterPro:IPR000719InterPro:IPR001480InterPro:IPR036426InterPro:Kinase-like_dom_sf
PFAM:PF00069PFAM:PF01453PIRSF:PIRSF000641ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011
PFscan:PS50927PANTHER:PTHR27002PANTHER:PTHR27002:SF31InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00108
SMART:SM00220InterPro:SRK-like_kinaseSUPFAM:SSF51110SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASSignalP:SignalP-noTM
UniParc:UPI0004EE340FSEG:seg::::
Description
BnaA01g04670D
Coordinates
chrLK031804:+:231644..234741
Molecular Weight (calculated)
88716.3 Da
IEP (calculated)
5.548
GRAVY (calculated)
-0.284
Length
810 amino acids
Sequence
(BLAST)
001: MRSFFIFFLT TCLTLFPHPL HAGVPYTGSI SPGFEGTQMN YINNNGIFLE SNSSAFGFGF ITTPASVTLF TLSIIHKPTS RLIWSANRAS PVSNSDKLQF
101: ESNGTILLRT EGGSEVWRLD NANKNASRME LRDSGNLVVV SGDDGASIWE SFDHPTDTLI TNQAFKENMK LTSNPSSSNM TYSLEIKSGD MVLSVDSSTP
201: QTYWSMGNDR GRIIEKNGVV TSSSLLGNSW RFFDEKPSLL WQFVYSDNKD DNATWIAVLG NNGVISFSNL GSGVSAADSS TKIPSDQCST PEPCGSYYSC
301: SGSKVCGCVS GLSRVRSDCK SGIDTSPCDN KKDNNASSPV ELVNAGDGVD YFALGFASPF SKKTTLDSCK EFCSNNCSCL GLFFRNSSGD CFLFDWIGSF
401: KASGSGGSGL VSYIKVATNG LGGGDNGDDG DGTHFPYIVI IRTRTKTILD GDEEHSSEED NFLENLSGMP IRFTFKDLQS ATNNFSIKLG QGGFGSVYEG
501: TLPDGSRLAV KKLEGIGQGK KEFRAEVSII GSIHHLHLVR LRGFCAEGAH RLLVYEFLAK GSLEKWIFRR RDGDILLDWD TRFNIAVGTA KGLAYLHEDC
601: DARIIHCDIK PENILLDDNF NAKVSDFGLA KLMTREQSHV FTTMRGTRGY LAPEWITNYA ISEKSDVYSY GMVLLELIGG RKNYDPSESS EKCHFPSYAF
701: KMMEEGKLLE IVDGKMKNVD VDDERVQRAM KTALWCIQED MHLRPSMSKV VQMLEGVFHV VQPPSSSTLG SRLYSSFCKS ISEEGGGTSS GPSDCNSENY
801: LSAVRLSGPR
Best Arabidopsis Sequence Match ( AT4G32300.1 )
(BLAST)
001: MRGVFIVIVT CLVFLPDPLR AGVASIGSIT PGFGGSQMNY INNDGIFLES NNSAFGFGFV TTQDSVTLFT LSIIHKSSTK LIWSANRASP VSNSDKFVFD
101: DNGNVVMEGT EVWRLDNSGK NASRIELRDS GNLVVVSVDG TSIWESFDHP TDTLITNQAF KEGMKLTSSP SSSNMTYALE IKSGDMVLSV NSLTPQVYWS
201: MANARERIIN KDGGVVTSSS LLGNSWRFFD QKQVLLWQFV FSDNKDDNTT WIAVLGNNGV ISFSNLGSGA SAADSSTKIP SDLCGTPEPC GPYYVCSGSK
301: VCGCVSGLSR ARSDCKTGIT SPCKKTKDNA TLPLQLVSAG DGVDYFALGY APPFSKKTDL DSCKEFCHNN CSCLGLFFQN SSGNCFLFDY IGSFKTSGNG
401: GSGFVSYIKI ASTGSGGGDN GEDDGKHFPY VVIIVVVTVF IIAVLIFVAF RIHKRKKMIL EAPQESSEED NFLENLSGMP IRFAYKDLQS ATNNFSVKLG
501: QGGFGSVYEG TLPDGSRLAV KKLEGIGQGK KEFRAEVSII GSIHHLHLVR LRGFCAEGAH RLLAYEFLSK GSLERWIFRK KDGDVLLDWD TRFNIALGTA
601: KGLAYLHEDC DARIVHCDIK PENILLDDNF NAKVSDFGLA KLMTREQSHV FTTMRGTRGY LAPEWITNYA ISEKSDVYSY GMVLLELIGG RKNYDPSETS
701: EKCHFPSFAF KKMEEGKLMD IVDGKMKNVD VTDERVQRAM KTALWCIQED MQTRPSMSKV VQMLEGVFPV VQPPSSSTMG SRLYSSFFKS ISEDGGATTS
801: SGPSDCNSEN YLSAVRLSGP R
Arabidopsis Description
SD25G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWZ5]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.