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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:secretory
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX80409 Canola plasma membrane 82.14 56.69
CDX88071 Canola plasma membrane 81.46 54.43
AT5G24080.2 Thale cress plasma membrane 78.74 53.1
KRG94132 Soybean cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 32.99 51.19
VIT_16s0050g01920.t01 Wine grape cytosol, mitochondrion, nucleus, plastid 56.46 44.5
PGSC0003DMT400074356 Potato cytosol, nucleus, plasma membrane 56.29 43.84
VIT_16s0050g01880.t01 Wine grape plasma membrane 58.16 39.91
KRH35213 Soybean plasma membrane 58.5 39.86
KRG91610 Soybean plasma membrane 58.33 39.75
Solyc03g007790.2.1 Tomato plasma membrane 57.82 39.35
Solyc06g036470.1.1 Tomato plasma membrane 53.74 38.26
GSMUA_Achr4P02510_001 Banana plasma membrane 40.48 32.78
CDY42356 Canola plasma membrane 19.9 26.23
CDX70909 Canola plasma membrane 18.88 25.23
CDX90728 Canola plasma membrane 31.12 23.61
CDX91781 Canola extracellular, plasma membrane, vacuole 27.04 21.87
CDY46464 Canola plasma membrane 30.61 21.74
CDY24320 Canola plasma membrane 30.1 21.0
CDY03159 Canola plasma membrane 29.59 20.79
CDY23321 Canola plasma membrane 28.91 20.58
CDX75235 Canola endoplasmic reticulum, plasma membrane 28.06 20.37
CDY13481 Canola plasma membrane 28.23 20.19
CDX72354 Canola plasma membrane 28.23 20.17
CDY39882 Canola plasma membrane 26.36 18.7
CDX95197 Canola plasma membrane 24.15 16.47
CDX68834 Canola plasma membrane 26.36 15.78
CDY45109 Canola plasma membrane 19.05 15.64
CDX88861 Canola endoplasmic reticulum 16.5 6.9
CDX70911 Canola mitochondrion 0.0 0.0
Protein Annotations
KEGG:04150+2.7.11.1KEGG:04151+2.7.11.1KEGG:04714+2.7.11.1KEGG:04926+2.7.11.1KEGG:05165+2.7.11.1Gene3D:1.10.510.10
Gene3D:3.30.200.20MapMan:50.2.7GO:A0A078CZ51EnsemblPlants:CDX80408ProteinID:CDX80408ProteinID:CDX80408.1
GO:GO:0000003GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0005488
GO:GO:0005524GO:GO:0006464GO:GO:0006468GO:GO:0007154GO:GO:0008150GO:GO:0008152
GO:GO:0009856GO:GO:0009875GO:GO:0009987GO:GO:0016301GO:GO:0016740GO:GO:0019538
GO:GO:0048544EnsemblPlantsGene:GSBRNA2T00133474001InterPro:IPR000719InterPro:Kinase-like_dom_sfPFAM:PF00069PFAM:PF00954
ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR27002PANTHER:PTHR27002:SF339InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BSSMART:SM00220SUPFAM:SSF56112InterPro:S_locus_glycoprot_domInterPro:Ser/Thr_kinase_ASTMHMM:TMhelix
UniParc:UPI0004EBE28F:::::
Description
BnaC07g30360D
Coordinates
chrLK031821:-:279179..282651
Molecular Weight (calculated)
67078.3 Da
IEP (calculated)
6.208
GRAVY (calculated)
-0.300
Length
588 amino acids
Sequence
(BLAST)
001: MMMRILVEFL EDAYLIHRDS DWPISTNEIQ RIPLLDIKFG NMDCNNENII LKEEDMHSSP HTHRPRIHIS NENNGNLRLY RWDNDMNGSS QWVPEWAAVS
101: NPCDIAGICG NGVCNLDRTK KNADCLCLPG SVKLPDQENN KLCSDNSSLV QECERNINRN GTFKISTVQE TNYYFSERSV IANHSDIGIS LNFGGFKDSA
201: NASYPFNNMI RILNCIKARL RQKVLVITIV VGMFVLVALL GMLLYYNVDR KRTLTRAAKN SLILCDSPVS FSYRDHQNAT NNFSQLLGSG RFGTVYKGRV
301: AGETLVAVKR LDREFSHGER EFITEVNTIG SMHHRNLVRL CGYCSEDSHR LLVYEFMING SLDKWIFSSD RTGRQLDWGT RFEIAVATAQ EISYFHEQCR
401: NRIIHCDIKP ENILLDENFC PKISDFGLAK MMGESILRGY GMLLLEIVGG RRNLDVSFNA EDFFYPGWAY KELTNGTALK AVDRRLQGVA EEDEVVKALK
501: VAYWCIQDDV SMRPSMGEVV KLPIEDSSDE INLPPMPETL LELIDEGLED VYRALRREVN NQLSSFTVNT MTTSQSIYRK CLRLGLLR
Best Arabidopsis Sequence Match ( AT5G24080.2 )
(BLAST)
001: MSSFHFYFPS VGLFSFFCFF LVSLATEPHI GLGSKLKASE PNRAWVSANG TFAIGFTRFK PTDRFLLSIW FAQLPGDPTI VWSPNRNSPV TKEAVLELEA
101: TGNLVLSDQN TVVWTSNTSN HGVESAVMSE SGNFLLLGTE VTAGPTIWQS FSQPSDTLLP NQPLTVSLEL TSNPSPSRHG HYSLKMLQQH TSLSLGLTYN
201: INLDPHANYS YWSGPDISNV TGDVTAVLDD TGSFKIVYGE SSIGAVYVYK NPVDDNRNYN NSSNLGLTKN PVLRRLVLEN NGNLRLYRWD NDMNGSSQWV
301: PEWAAVSNPC DIAGICGNGV CNLDRTKKNA DCLCLPGSVK LPDQENAKLC SDNSSLVQEC ESNINRNGSF KISTVQETNY YFSERSVIEN ISDISNVRKC
401: GEMCLSDCKC VASVYGLDDE KPYCWILKSL NFGGFRDPGS TLFVKTRANE SYPSNSNNND SKSRKSHGLR QKVLVIPIVV GMLVLVALLG MLLYYNLDRK
501: RTLKRAAKNS LILCDSPVSF TYRDLQNCTN NFSQLLGSGG FGTVYKGTVA GETLVAVKRL DRALSHGERE FITEVNTIGS MHHMNLVRLC GYCSEDSHRL
601: LVYEYMINGS LDKWIFSSEQ TANLLDWRTR FEIAVATAQG IAYFHEQCRN RIIHCDIKPE NILLDDNFCP KVSDFGLAKM MGREHSHVVT MIRGTRGYLA
701: PEWVSNRPIT VKADVYSYGM LLLEIVGGRR NLDMSYDAED FFYPGWAYKE LTNGTSLKAV DKRLQGVAEE EEVVKALKVA FWCIQDEVSM RPSMGEVVKL
801: LEGTSDEINL PPMPQTILEL IEEGLEDVYR AMRREFNNQL SSLTVNTITT SQSYRSSSRS HATCSYSSMS PR
Arabidopsis Description
G-type lectin S-receptor-like serine/threonine-protein kinase At5g24080 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLV4]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.