Factsheet for VIT_16s0050g01920.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, nucleus, cytosol

Predictor Summary:

nucleus 4
mitochondrion 3
cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_16s0050g01880.t01	Wine grape	plasma membrane	91.96	80.05
KRG94132	Soybean	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	36.19	71.24
PGSC0003DMT400074356	Potato	cytosol, nucleus, plasma membrane	70.11	69.27
KRH35213	Soybean	plasma membrane	72.79	62.92
KRG91610	Soybean	plasma membrane	72.39	62.57
Solyc03g007790.2.1	Tomato	plasma membrane	71.85	62.04
Solyc06g036470.1.1	Tomato	plasma membrane	66.76	60.29
CDX80409	Canola	plasma membrane	64.88	56.81
AT5G24080.2	Thale cress	plasma membrane	66.35	56.77
CDX80408	Canola	cytosol	44.5	56.46
Bra009730.1-P	Field mustard	plasma membrane	65.82	55.8
CDX88071	Canola	plasma membrane	65.68	55.68
GSMUA_Achr4P02510_001	Banana	plasma membrane	48.79	50.14
VIT_08s0032g00830.t01	Wine grape	cytosol	5.23	38.24
VIT_12s0028g01450.t01	Wine grape	plasma membrane	21.05	37.38
VIT_18s0086g00200.t01	Wine grape	cytosol	30.16	36.35
VIT_11s0016g04840.t01	Wine grape	plasma membrane	20.64	34.22
VIT_08s0032g00810.t01	Wine grape	cytosol	7.91	32.78
VIT_04s0008g05500.t01	Wine grape	cytosol, nucleus, plasma membrane	32.98	31.14
VIT_18s0086g00210.t01	Wine grape	plasma membrane	34.85	30.62
VIT_11s0016g05440.t01	Wine grape	plasma membrane	31.37	28.82
VIT_12s0028g01640.t01	Wine grape	plasma membrane	25.6	28.77
VIT_12s0028g01460.t01	Wine grape	plasma membrane	29.36	28.19
VIT_12s0028g01430.t01	Wine grape	plasma membrane	29.89	27.91
VIT_12s0028g01530.t01	Wine grape	plasma membrane	30.43	26.96
VIT_09s0002g06830.t01	Wine grape	plasma membrane	31.37	26.12
VIT_12s0028g01650.t01	Wine grape	plasma membrane	28.42	25.18
VIT_12s0028g01280.t01	Wine grape	plasma membrane	28.69	24.85
VIT_12s0028g01630.t01	Wine grape	plastid	27.88	23.27
VIT_18s0001g03390.t01	Wine grape	plastid	23.86	20.97
VIT_12s0028g01490.t01	Wine grape	cytosol	2.95	20.0
VIT_12s0028g01270.t01	Wine grape	plasma membrane	29.09	17.6
VIT_12s0028g01520.t01	Wine grape	plasma membrane	30.16	17.03

Protein Annotations

KEGG:04150+2.7.11.1	KEGG:04151+2.7.11.1	KEGG:04714+2.7.11.1	KEGG:04926+2.7.11.1	KEGG:05165+2.7.11.1	Gene3D:1.10.510.10
MapMan:18.4.1.24.2	Gene3D:3.30.200.20	EMBL:AM453643	ProteinID:CAN67736	ProteinID:CAN67736.1	ProteinID:CBI22598
ProteinID:CBI22598.3	UniProt:E0CUP8	EMBL:FN595243	GO:GO:0000003	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0008150
GO:GO:0008152	GO:GO:0009856	GO:GO:0009875	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	GO:GO:0048544	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	PFAM:PF00069	PFAM:PF00954	PIRSF:PIRSF000641	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR27002	PANTHER:PTHR27002:SF339	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220
InterPro:SRK-like_kinase	SUPFAM:SSF56112	InterPro:S_locus_glycoprot_dom	InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix	UniParc:UPI0001BE2042
ArrayExpress:VIT_16s0050g01920	EnsemblPlantsGene:VIT_16s0050g01920	EnsemblPlants:VIT_16s0050g01920.t01	SEG:seg	:	:

Description

No Description!

Coordinates

chr16:+:18856483..18860368

Molecular Weight (calculated)

83206.0 Da

IEP (calculated)

7.070

GRAVY (calculated)

-0.280

Length

746 amino acids

Sequence
(BLAST)

001: MGSNKNHQWA AQSITKGPRW WPEKRARHGE TIAHAVWEIT ERTVGVWAFV SSCRSRFPLW QSFSHPSDTL LPNQPLTASM QLTSSSPAHG GYYTIQMLQQ
101: PTSLSLGLIY NLPDSYITSL QSYTNYSYWS GPDISNVTGD VVAVLDRAGS FGIMPLVLRR LILEMNGNLR LYRWDDDVNC TRQWVPEWAA VSNPCDIAGV
201: CGNGVCSLDR SKTNASCTCL PGASKVGDSG QCSENSSVSA GKCDNNHRNS TASKLKMSIV QQTNYYYPES SIIANYSNMS QLSKCGDACL SDCDCVASVY
301: GPSEEKPYCW LLNSLEFGGF EDTSSTLFVK VGPNGSPEDK ATGSGDSSDG LRDKVLVLPI VLSMTVLVAL LCLLLYHTLY RRRALKRSLE SSLSVSGAPM
401: NFSYRNLQSR TGNFSQLLGT GGFGSVYKGS LSDEALVAVK KLDKVLSHGE KEFITEVNTI GSMHHMNLVR LCGYCSEGSH RLLVYEFMKN GSLDKWIFPS
501: KHCRDRLLDW GTRFHIAIAT AQGIAYFHEQ CRNRIIHCDI KPENILLDEN FCPKVSDFGL AKLMGREHSH VVTMVRGTRG YLAPEWVSNR PITVKADVYS
601: YGMLLLEIVG GRRNLDMTFD AEDFFYPGWA FKEMSNGTTR KVADRRLEGA VEEEELERAL KTGFWCIQDE VFMRPSMGEV VKMLEGSLEI NTPPMPQTVL
701: ELMEEGLDNV YRAMKREFNQ SSFFTINNST HPSSRATCSY STMSPR

Best Arabidopsis Sequence Match ( AT5G24080.1 )
(BLAST)

001: MSESGNFLLL GTEVTAGPTI WQSFSQPSDT LLPNQPLTVS LELTSNPSPS RHGHYSLKML QQHTSLSLGL TYNINLDPHA NYSYWSGPDI SNVTGDVTAV
101: LDDTGSFKIV YGESSIGAVY VYKNPVDDNR NYNNSSNLGL TKNPVLRRLV LENNGNLRLY RWDNDMNGSS QWVPEWAAVS NPCDIAGICG NGVCNLDRTK
201: KNADCLCLPG SVKLPDQENA KLCSDNSSLV QECESNINRN GSFKISTVQE TNYYFSERSV IENISDISNV RKCGEMCLSD CKCVASVYGL DDEKPYCWIL
301: KSLNFGGFRD PGSTLFVKTR ANESYPSNSN NNDSKSRKSH GLRQKVLVIP IVVGMLVLVA LLGMLLYYNL DRKRTLKRAA KNSLILCDSP VSFTYRDLQN
401: CTNNFSQLLG SGGFGTVYKG TVAGETLVAV KRLDRALSHG EREFITEVNT IGSMHHMNLV RLCGYCSEDS HRLLVYEYMI NGSLDKWIFS SEQTANLLDW
501: RTRFEIAVAT AQGIAYFHEQ CRNRIIHCDI KPENILLDDN FCPKVSDFGL AKMMGREHSH VVTMIRGTRG YLAPEWVSNR PITVKADVYS YGMLLLEIVG
601: GRRNLDMSYD AEDFFYPGWA YKELTNGTSL KAVDKRLQGV AEEEEVVKAL KVAFWCIQDE VSMRPSMGEV VKLLEGTSDE INLPPMPQTI LELIEEGLED
701: VYRAMRREFN NQLSSLTVNT ITTSQSYRSS SRSHATCSYS SMSPR

Arabidopsis Description

G-type lectin S-receptor-like serine/threonine-protein kinase At5g24080 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLV4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.