Factsheet for Bra040074.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 3
cytosol 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT4G32300.1	Thale cress	plasma membrane	92.7	20.1
TraesCS7B01G196400.2	Wheat	cytosol, endoplasmic reticulum, plasma membrane, plastid	71.91	19.75
Bra023955.1-P	Field mustard	plasma membrane	87.64	19.0
VIT_04s0008g05500.t01	Wine grape	cytosol, nucleus, plasma membrane	78.65	17.72
PGSC0003DMT400082723	Potato	endoplasmic reticulum, nucleus, plasma membrane, plastid	76.4	17.62
Solyc08g059730.1.1	Tomato	plasma membrane	76.4	16.83
KRH61766	Soybean	extracellular, plasma membrane	75.84	16.54
KRH52432	Soybean	endoplasmic reticulum, plasma membrane, vacuole	75.84	16.52
Bra027975.1-P	Field mustard	plasma membrane	41.01	16.37
KRH15882	Soybean	plasma membrane	73.6	16.17
KRH05175	Soybean	plasma membrane	73.03	16.01
OQU76372	Sorghum	plasma membrane	73.6	15.63
Os06t0494100-02	Rice	mitochondrion	73.03	15.38
TraesCS7A01G230900.1	Wheat	mitochondrion, plasma membrane	71.91	15.27
TraesCS7D01G231000.1	Wheat	mitochondrion, plasma membrane	71.91	15.22
Zm00001d045950_P003	Maize	cytosol, endoplasmic reticulum, plasma membrane	71.91	15.08
HORVU7Hr1G047150.8	Barley	mitochondrion, plasma membrane	72.47	14.86
KRH23578	Soybean	endoplasmic reticulum, plasma membrane	64.04	14.02
KRH09726	Soybean	plasma membrane	63.48	13.88
TraesCS3D01G480200.1	Wheat	mitochondrion	58.43	13.32
CDX68834	Canola	plasma membrane	71.35	12.93
GSMUA_Achr7P10190_001	Banana	plasma membrane	49.44	12.83
TraesCS3A01G091800.1	Wheat	endoplasmic reticulum, nucleus, plasma membrane	58.99	12.71
VIT_09s0002g06830.t01	Wine grape	plasma membrane	61.8	12.28
VIT_11s0016g05440.t01	Wine grape	plasma membrane	53.93	11.82
Bra020082.1-P	Field mustard	plasma membrane	37.64	9.7
TraesCS3B01G107000.1	Wheat	plasma membrane	44.38	9.13
Bra028049.1-P	Field mustard	plasma membrane	38.2	8.19
Bra009730.1-P	Field mustard	plasma membrane	40.45	8.18
Bra036747.1-P	Field mustard	plasma membrane	37.08	7.97
Bra011337.1-P	Field mustard	plasma membrane	71.35	7.97
Bra006536.1-P	Field mustard	plasma membrane, vacuole	26.97	7.62
Bra000686.1-P	Field mustard	plasma membrane	30.9	7.11
Bra006538.1-P	Field mustard	mitochondrion	0.0	0.0

Protein Annotations

Gene3D:1.10.510.10	MapMan:50.2.7	EnsemblPlantsGene:Bra040074	EnsemblPlants:Bra040074.1	EnsemblPlants:Bra040074.1-P	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M4FG49	PFAM:PF00069	PFscan:PS50011
PANTHER:PTHR27002	PANTHER:PTHR27002:SF31	InterPro:Prot_kinase_dom	SUPFAM:SSF56112	UniParc:UPI0002546B2E	SEG:seg

Description

AT4G32300 (E=5e-078) SD2-5 | SD2-5 (S-DOMAIN-2 5); carbohydrate binding / kinase/ protein kinase

Coordinates

chrA08:-:13164279..13164815

Molecular Weight (calculated)

19951.7 Da

IEP (calculated)

5.743

GRAVY (calculated)

-0.447

Length

178 amino acids

Sequence
(BLAST)

001: MTREQSHVFT TMRGTRGYLA PEWITNYAIS EKSDVYSYGM VLLELIGGRK NYDPSESSEK CHFPSYAFKM MEEGKLLEIV DGKMKNVDVD DERVQRAMKT
101: ALWCIQEDMH LRPSMSKVVQ MLEGVFSVVQ PPSSSTLGSR LYSSFFKSIS EEGGGTSSGP SDCNSENYIS AVRLSGPR

Best Arabidopsis Sequence Match ( AT4G32300.1 )
(BLAST)

001: MRGVFIVIVT CLVFLPDPLR AGVASIGSIT PGFGGSQMNY INNDGIFLES NNSAFGFGFV TTQDSVTLFT LSIIHKSSTK LIWSANRASP VSNSDKFVFD
101: DNGNVVMEGT EVWRLDNSGK NASRIELRDS GNLVVVSVDG TSIWESFDHP TDTLITNQAF KEGMKLTSSP SSSNMTYALE IKSGDMVLSV NSLTPQVYWS
201: MANARERIIN KDGGVVTSSS LLGNSWRFFD QKQVLLWQFV FSDNKDDNTT WIAVLGNNGV ISFSNLGSGA SAADSSTKIP SDLCGTPEPC GPYYVCSGSK
301: VCGCVSGLSR ARSDCKTGIT SPCKKTKDNA TLPLQLVSAG DGVDYFALGY APPFSKKTDL DSCKEFCHNN CSCLGLFFQN SSGNCFLFDY IGSFKTSGNG
401: GSGFVSYIKI ASTGSGGGDN GEDDGKHFPY VVIIVVVTVF IIAVLIFVAF RIHKRKKMIL EAPQESSEED NFLENLSGMP IRFAYKDLQS ATNNFSVKLG
501: QGGFGSVYEG TLPDGSRLAV KKLEGIGQGK KEFRAEVSII GSIHHLHLVR LRGFCAEGAH RLLAYEFLSK GSLERWIFRK KDGDVLLDWD TRFNIALGTA
601: KGLAYLHEDC DARIVHCDIK PENILLDDNF NAKVSDFGLA KLMTREQSHV FTTMRGTRGY LAPEWITNYA ISEKSDVYSY GMVLLELIGG RKNYDPSETS
701: EKCHFPSFAF KKMEEGKLMD IVDGKMKNVD VTDERVQRAM KTALWCIQED MQTRPSMSKV VQMLEGVFPV VQPPSSSTMG SRLYSSFFKS ISEDGGATTS
801: SGPSDCNSEN YLSAVRLSGP R

Arabidopsis Description

SD25G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWZ5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.