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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • golgi 5
  • plasma membrane 7
  • endoplasmic reticulum 6
  • vacuole 5
  • nucleus 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d020703_P001 Maize plasma membrane 90.49 90.39
Os09t0454900-01 Rice plasma membrane 71.57 72.05
TraesCS5D01G243800.1 Wheat endoplasmic reticulum, plasma membrane 69.03 68.5
HORVU5Hr1G068070.1 Barley plasma membrane 68.81 68.2
TraesCS5A01G237700.1 Wheat plasma membrane 68.25 67.36
TraesCS5B01G236200.1 Wheat plasma membrane 69.03 65.14
EES07585 Sorghum plasma membrane 52.32 53.51
Bra027975.1-P Field mustard plasma membrane 24.45 49.55
CDY42356 Canola plasma membrane 24.45 49.55
KRH53204 Soybean plasma membrane 43.47 44.91
EES17510 Sorghum mitochondrion, plasma membrane 45.91 44.86
PGSC0003DMT400002386 Potato plasma membrane 42.37 43.97
AT5G35370.1 Thale cress plasma membrane 41.37 42.89
PGSC0003DMT400070026 Potato endoplasmic reticulum, plasma membrane, vacuole 40.6 41.7
Solyc04g015460.2.1 Tomato endoplasmic reticulum, plasma membrane, vacuole 40.04 41.66
CDX95197 Canola plasma membrane 39.6 41.53
KXG19268 Sorghum plasma membrane 16.7 33.19
OQU76372 Sorghum plasma membrane 29.76 32.1
KXG27741 Sorghum endoplasmic reticulum, extracellular, plasma membrane 25.66 29.63
KXG37964 Sorghum endoplasmic reticulum, golgi, vacuole 26.33 29.46
EER88498 Sorghum plasma membrane 27.32 29.4
OQU90662 Sorghum plasma membrane 27.54 29.23
EES03148 Sorghum plasma membrane 19.25 28.86
EES00096 Sorghum plasma membrane 27.65 28.84
OQU80090 Sorghum plasma membrane 24.89 28.63
EES15335 Sorghum plasma membrane 26.55 28.34
KXG29880 Sorghum plasma membrane 26.0 28.01
EES14230 Sorghum plasma membrane 24.56 27.92
OQU86485 Sorghum plasma membrane 19.14 27.77
OQU86484 Sorghum cytosol 6.19 26.79
EES01170 Sorghum plasma membrane, plastid 14.38 25.74
OQU79589 Sorghum plasma membrane 14.6 21.09
Protein Annotations
KEGG:04150+2.7.11.1KEGG:04151+2.7.11.1KEGG:04714+2.7.11.1KEGG:04926+2.7.11.1KEGG:05165+2.7.11.1Gene3D:2.90.10.10
Gene3D:3.30.200.20MapMan:50.2.7EntrezGene:8081047InterPro:Bulb-type_lectin_domInterPro:Bulb-type_lectin_dom_sfUniProt:C5X2A2
EnsemblPlants:EER96846ProteinID:EER96846ProteinID:EER96846.1GO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0004672GO:GO:0004674GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0005623
GO:GO:0005886GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0016020GO:GO:0016021GO:GO:0016301GO:GO:0016310GO:GO:0016740GO:GO:0019538
InterPro:IPR000719InterPro:IPR001480InterPro:IPR003609InterPro:IPR036426InterPro:Kinase-like_dom_sfPFAM:PF00069
PFAM:PF01453PIRSF:PIRSF000641ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PFscan:PS50927
PFscan:PS50948PANTHER:PTHR27002PANTHER:PTHR27002:SF105InterPro:Pan_appInterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BS
SMART:SM00108SMART:SM00220EnsemblPlantsGene:SORBI_3002G224400InterPro:SRK-like_kinaseSUPFAM:SSF51110SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_ASSignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0001A835B2RefSeq:XP_002460325.1SEG:seg
Description
hypothetical protein
Coordinates
chr2:+:61593371..61596780
Molecular Weight (calculated)
95424.4 Da
IEP (calculated)
7.344
GRAVY (calculated)
-0.035
Length
904 amino acids
Sequence
(BLAST)
001: MSPLPPALPR SLAFLGLALI LLPARAADAG PLTTELLRPP FTASNILYVD TDGAFLESKN GAFKAAVWNP GQGEQQDRFY LVVLHAPSAT VVWSGNRGAP
101: TTSSGSVKLT SQGLTVSNPD GTVLWSTPPQ LPSPVVALRL LDSGNLQLLD AGNATLWQSF DNATDTLLPG QQLRAGAYLS AATSATDLAE GNYRLGVTTA
201: DLVLTWQAST YWRLSNDVRS YKDRNAAVAS VSVNASGLFA VAADGGLVFR VDLGEAAFPV LKLGYDGRLR ITSYPLVNSS APLGSDFVAP ANDCDLPLQC
301: PSLGLCSPSG NSSTCTCPPL FAASATTPGA CTPGDGSALA SPALCQSSNS TVSPAYLALK SKAAYFATKF DPPIKTGVNH NACRGLCSTS CGCLAYFYDN
401: SSLSCYLIQE KQLGSLYLSS SASAMGYIKT IPSPNNATRN NSSSSSANRV VPIVLPSIAA FLLLTVIACY ACWRRMRNNG KKRKGRSPGV KQVYMGRQKD
501: TGNADDDEDD DNVRVPGMPT RFSYAEIEAM TSNFETKIGS GGFGSVYKGE LPGVEGLVAV KKLEAVGVQA KREFCTEITV IANIRHVNLV RLRGFCAEGS
601: RRLLVYEYMN RGSLDRSLFG RTGPVLEWGE RMEVALGVAR GLAYLHTGCD QKIVHCDVKP ENILLADGGQ VKVADFGLAK LMSPEQSALF TTMRGTRGYL
701: APEWLSNAAI SDRADVYSFG MVLLELIHGR KNRGEQTNDG VAAAVAVAVA GSSVHSDWPS GWSSATAVSS PSGASGSGDE YFPMVAMELH GQGRHLDLVD
801: PRLEGRVEEA EAARAVRIAL CCLHEDPAQR PSMAAVVRML EGTVAPPEPR VEALGFLRLY GRGHAVPNTS LIAMAGTSGS AGTPSSTAGV SQLTDTLQSV
901: SAPR
Best Arabidopsis Sequence Match ( AT5G35370.1 )
(BLAST)
001: MKSTFLLLLL LLSLNLLFVF VSCASSIEFV YPNFTASNLR FVDSSKGAFL LSRNSIFKAG LFSPGGDDSS TGFYFSVVHV DSGSTIWSSN RDSPVSSSGT
101: MNLTPQGISV IEDGKSQIPV WSTPVLASPV KSLRLTDAGN LLLLDHLNVS LWESFDFPTD SIVLGQRLKL GMFLSGSVSR SDFSTGDYKF LVGESDGLMQ
201: WRGQNYWKLR MHIRANVDSN FPVEYLTVTT SGLALMARNG TVVVVRVALP PSSDFRVAKM DSSGKFIVSR FSGKNLVTEF SGPMDSCQIP FVCGKLGLCN
301: LDNASENQSC SCPDEMRMDA GKGVCVPVSQ SLSLPVSCEA RNISYLELGL GVSYFSTHFT DPVEHGLPLL ACHDICSKNC SCLGVFYENT SRSCYLVKDS
401: FGSLSLVKNS PENHDLIGYV KLSIRKTNAQ PPGNNNRGGS SFPVIALVLL PCSGFFLLIA LGLLWWRRCA VMRYSSIREK QVTRPGSFES GDLGSFHIPG
501: LPQKFEFEEL EQATENFKMQ IGSGGFGSVY KGTLPDETLI AVKKITNHGL HGRQEFCTEI AIIGNIRHTN LVKLRGFCAR GRQLLLVYEY MNHGSLEKTL
601: FSGNGPVLEW QERFDIALGT ARGLAYLHSG CDQKIIHCDV KPENILLHDH FQPKISDFGL SKLLNQEESS LFTTMRGTRG YLAPEWITNA AISEKADVYS
701: YGMVLLELVS GRKNCSFRSR SNSVTEDNNQ NHSSTTTTST GLVYFPLYAL DMHEQGRYME LADPRLEGRV TSQEAEKLVR IALCCVHEEP ALRPTMAAVV
801: GMFEGSIPLG NPRMESLNFL RFYGLRFAES SMVEGQNGES ETMVFHRRES SNSGGSRQSA SYIASQEVSG PR
Arabidopsis Description
G-type lectin S-receptor-like serine/threonine-protein kinase At5g35370 [Source:UniProtKB/Swiss-Prot;Acc:O65238]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.