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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • golgi 5
  • plasma membrane 9
  • endoplasmic reticulum 5
  • vacuole 5
  • cytosol 1
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, nucleus, secretory
BaCelLo:secretory
EpiLoc:cytosol
iPSORT:secretory
MultiLoc:plasma membrane
Plant-mPloc:nucleus, plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
plasma membrane: 27800704
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6B01G444200.1 Wheat cytosol 45.87 74.08
TraesCS5A01G458600.1 Wheat nucleus, plasma membrane, plastid 37.25 73.18
TraesCS6D01G386500.1 Wheat cytosol 44.67 70.11
TraesCS2B01G290100.3 Wheat plasma membrane 70.18 69.85
TraesCS2A01G271900.1 Wheat plasma membrane 65.51 69.59
EES15335 Sorghum plasma membrane 70.06 69.07
TraesCS5B01G468100.1 Wheat nucleus 47.66 68.27
EES14230 Sorghum plasma membrane 64.67 67.92
TraesCS6B01G445200.1 Wheat cytosol 51.14 66.3
TraesCS1A01G017200.1 Wheat plasma membrane 64.79 65.1
TraesCS1D01G014300.1 Wheat plasma membrane 51.26 64.65
HORVU6Hr1G092620.1 Barley plasma membrane 61.44 64.12
TraesCS6B01G444600.1 Wheat plasma membrane 63.23 64.08
HORVU1Hr1G005720.5 Barley cytosol, plasma membrane 58.8 63.77
HORVU2Hr1G066280.1 Barley plasma membrane 63.11 63.34
TraesCSU01G171900.1 Wheat plasma membrane 62.04 63.33
TraesCS6D01G386200.1 Wheat plasma membrane 61.44 63.1
TraesCS5D01G469700.1 Wheat plasma membrane 64.79 61.48
VIT_08s0032g00830.t01 Wine grape cytosol 7.43 60.78
Solyc07g055430.1.1 Tomato cytosol 8.74 60.33
PGSC0003DMT400044735 Potato cytosol 12.69 60.23
Solyc07g055670.1.1 Tomato cytosol 16.89 59.49
Solyc07g055580.1.1 Tomato plasma membrane 20.24 57.48
Solyc07g055420.1.1 Tomato cytosol 14.85 56.88
Solyc07g055410.1.1 Tomato cytosol 5.51 56.79
Solyc07g055630.2.1 Tomato cytosol 21.2 55.84
Solyc07g055400.1.1 Tomato cytosol 15.33 54.47
VIT_08s0032g00810.t01 Wine grape cytosol 11.74 54.44
Solyc07g055650.1.1 Tomato cytosol, plasma membrane, plastid 26.35 52.38
VIT_12s0028g01450.t01 Wine grape plasma membrane 25.87 51.43
Solyc07g055570.1.1 Tomato cytosol 10.66 48.9
PGSC0003DMT400044673 Potato plasma membrane 48.38 48.56
PGSC0003DMT400044506 Potato plasma membrane 30.66 47.32
PGSC0003DMT400044620 Potato cytosol 28.86 46.8
Os02t0234450-00 Rice plasma membrane 46.59 46.53
VIT_12s0028g01430.t01 Wine grape plasma membrane 44.07 46.06
VIT_12s0028g01460.t01 Wine grape plasma membrane 42.75 45.95
PGSC0003DMT400044522 Potato cytosol, nucleus, plasma membrane 40.0 45.88
VIT_12s0028g01530.t01 Wine grape plasma membrane 45.15 44.77
VIT_12s0028g01640.t01 Wine grape plasma membrane 34.97 43.98
VIT_12s0028g01280.t01 Wine grape plasma membrane 44.91 43.55
PGSC0003DMT400044515 Potato plasma membrane 43.11 43.11
PGSC0003DMT400096753 Potato plasma membrane 42.52 42.62
PGSC0003DMT400044668 Potato plasma membrane 42.87 42.52
Os01t0113650-00 Rice mitochondrion, plasma membrane 33.05 42.07
Os01t0113350-00 Rice plasma membrane, vacuole 32.81 42.02
PGSC0003DMT400073253 Potato plasma membrane 41.8 41.9
PGSC0003DMT400044608 Potato plasma membrane 42.16 41.85
Solyc02g072070.2.1 Tomato plasma membrane 39.28 41.31
PGSC0003DMT400044528 Potato plasma membrane 41.8 41.25
VIT_12s0028g01650.t01 Wine grape plasma membrane 41.32 40.97
PGSC0003DMT400044503 Potato extracellular, plasma membrane, vacuole 40.24 40.73
VIT_12s0028g01630.t01 Wine grape plastid 42.28 39.49
Os06t0494100-02 Rice mitochondrion 33.17 32.78
Os12t0640700-01 Rice cytosol, plasma membrane 19.28 30.61
Os06t0142650-00 Rice plasma membrane 16.77 30.37
TraesCS6A01G402100.1 Wheat plasma membrane 60.84 30.36
VIT_12s0028g01270.t01 Wine grape plasma membrane 44.67 30.25
VIT_12s0028g01520.t01 Wine grape plasma membrane 46.35 29.3
Os03t0838100-01 Rice plasma membrane 28.86 28.09
Os02t0767400-01 Rice plasma membrane 29.7 27.4
Os09t0454900-01 Rice plasma membrane 28.02 26.06
Solyc07g055640.1.1 Tomato cytosol 25.39 25.82
Os01t0648600-00 Rice plasma membrane 14.73 24.31
Protein Annotations
KEGG:04150+2.7.11.1KEGG:04151+2.7.11.1KEGG:04714+2.7.11.1KEGG:04926+2.7.11.1KEGG:05165+2.7.11.1Gene3D:1.10.510.10
MapMan:18.4.1.24.2Gene3D:2.90.10.10Gene3D:3.30.200.20EntrezGene:4335421UniProt:B9FEC3ProteinID:BAS88472.1
InterPro:Bulb-type_lectin_domInterPro:Bulb-type_lectin_dom_sfncoils:CoilProteinID:EEE60706.1GO:GO:0000003GO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0004674GO:GO:0005488GO:GO:0005524
GO:GO:0005575GO:GO:0005623GO:GO:0005886GO:GO:0006464GO:GO:0006468GO:GO:0007154
GO:GO:0008150GO:GO:0008152GO:GO:0009856GO:GO:0009875GO:GO:0009987GO:GO:0016020
GO:GO:0016021GO:GO:0016301GO:GO:0016310GO:GO:0016740GO:GO:0019538GO:GO:0048544
InterPro:IPR000719InterPro:IPR001480InterPro:IPR003609InterPro:IPR036426InterPro:Kinase-like_dom_sfEnsemblPlantsGene:Os04g0303100
EnsemblPlants:Os04t0303100-00PFAM:PF00069PFAM:PF00954PFAM:PF01453PFAM:PF08276PIRSF:PIRSF000641
ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PFscan:PS50927PFscan:PS50948PANTHER:PTHR27002
PANTHER:PTHR27002:SF178InterPro:Pan_appInterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00108SMART:SM00220
InterPro:SRK-like_kinaseSUPFAM:SSF51110SUPFAM:SSF56112InterPro:S_locus_glycoprot_domInterPro:Ser/Thr_kinase_ASSignalP:SignalP-noTM
TMHMM:TMhelixUniParc:UPI0001933B19RefSeq:XP_015634773.1SEG:seg::
Description
Similar to H0215E01.10 protein. (Os04t0303100-00)
Coordinates
chr4:-:13552826..13555333
Molecular Weight (calculated)
93811.3 Da
IEP (calculated)
5.978
GRAVY (calculated)
-0.229
Length
835 amino acids
Sequence
(BLAST)
001: MSPGNLFADF TVLVVVVLAV AAPPVSGQRS VYPSANLSTL WVKNKVLDSV PYEDGLVRAI VLRSPQTSDL SFAAGFFCTP PCQEFIFAVF IFPDTDSFPV
101: NKMARVVWCA NQASPVGENA TLELTGDGDL VLREKANGRL IWSSGTSDQS VRRMEITEQG NLVLFGQRNM TVWQSFDHPT DALVPGQSLL QGKMLRANAS
201: PTNWTEGKIY ITVLRDGVHG YVESTPPQLY FKHELSRNMS QRDPTRITFT NGSLSIFLQS THPGNPDESI QFQEAKSTQY IRLESDGHLR LFEWSRGEPS
301: WIMVSDVMKE FLHVDDCAFP TVCGEYGICT SGQCICPFQS NSSSRYFQLV DERKTNLGCA PVTPVSCQEI KNHQLLTLTD VSYFDMSQII MNAKNRDDCK
401: QACLKNCSCK AVAFRYGQND SNGECRSVTE VFSLQSIQPE KVNYNSSAYL KVQITPSSDP TQKKLKTILG ATLAAITTLV LVVIVAIYVR RRRKYQELDE
501: ELEFDILPGM PTRFSFEKLR ECTEDFSKKL GEGGFGSVFE GKIGEESVAV KRLEGARQGK KEFLAEVETI GSIEHINLVR LIGFCAEKSN RLLVYEYMPR
601: GSLDRWIYYR HNNAPLDWCT RCKIIMDIAK GLCYLHEECR RKIAHLDIKP QNILLDENFN AKLADFGLSK LIDRDQSKVV TVMRGTPGYL APEWLTSQIT
701: EKVDIYSFGV VLMEIISGRK NIDLSQPEES VQLINLLREK AQNDQLLDMI DKHSNDMVSH QEEVIQMMKL AMWCLQNDSS RRPSMSMVVK VLEGAMSVEN
801: CLDYSFFNAN SVISAQGNPS TYSAPPQESI LSGPR
Best Arabidopsis Sequence Match ( AT4G32300.1 )
(BLAST)
001: MRGVFIVIVT CLVFLPDPLR AGVASIGSIT PGFGGSQMNY INNDGIFLES NNSAFGFGFV TTQDSVTLFT LSIIHKSSTK LIWSANRASP VSNSDKFVFD
101: DNGNVVMEGT EVWRLDNSGK NASRIELRDS GNLVVVSVDG TSIWESFDHP TDTLITNQAF KEGMKLTSSP SSSNMTYALE IKSGDMVLSV NSLTPQVYWS
201: MANARERIIN KDGGVVTSSS LLGNSWRFFD QKQVLLWQFV FSDNKDDNTT WIAVLGNNGV ISFSNLGSGA SAADSSTKIP SDLCGTPEPC GPYYVCSGSK
301: VCGCVSGLSR ARSDCKTGIT SPCKKTKDNA TLPLQLVSAG DGVDYFALGY APPFSKKTDL DSCKEFCHNN CSCLGLFFQN SSGNCFLFDY IGSFKTSGNG
401: GSGFVSYIKI ASTGSGGGDN GEDDGKHFPY VVIIVVVTVF IIAVLIFVAF RIHKRKKMIL EAPQESSEED NFLENLSGMP IRFAYKDLQS ATNNFSVKLG
501: QGGFGSVYEG TLPDGSRLAV KKLEGIGQGK KEFRAEVSII GSIHHLHLVR LRGFCAEGAH RLLAYEFLSK GSLERWIFRK KDGDVLLDWD TRFNIALGTA
601: KGLAYLHEDC DARIVHCDIK PENILLDDNF NAKVSDFGLA KLMTREQSHV FTTMRGTRGY LAPEWITNYA ISEKSDVYSY GMVLLELIGG RKNYDPSETS
701: EKCHFPSFAF KKMEEGKLMD IVDGKMKNVD VTDERVQRAM KTALWCIQED MQTRPSMSKV VQMLEGVFPV VQPPSSSTMG SRLYSSFFKS ISEDGGATTS
801: SGPSDCNSEN YLSAVRLSGP R
Arabidopsis Description
SD25G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWZ5]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.