Factsheet for GSMUA_Achr6P05570_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid, mitochondrion

Predictor Summary:

plastid 3
plasma membrane 1
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc07g055410.1.1	Tomato	cytosol	9.01	65.43
Solyc07g055420.1.1	Tomato	cytosol	19.22	51.83
GSMUA_Achr6P05560_001	Banana	plasma membrane	39.46	43.61
TraesCS7B01G273000.1	Wheat	plastid	28.91	42.08
Solyc07g055630.2.1	Tomato	cytosol	22.45	41.64
Solyc07g055580.1.1	Tomato	plasma membrane	20.24	40.48
Solyc07g055650.1.1	Tomato	cytosol, plasma membrane, plastid	28.57	40.0
VIT_12s0028g01450.t01	Wine grape	plasma membrane	28.4	39.76
VIT_08s0032g00810.t01	Wine grape	cytosol	11.9	38.89
PGSC0003DMT400044735	Potato	cytosol	11.39	38.07
Solyc07g055400.1.1	Tomato	cytosol	14.97	37.45
Solyc07g055670.1.1	Tomato	cytosol	14.63	36.29
VIT_08s0032g00830.t01	Wine grape	cytosol	5.95	34.31
TraesCS4A01G026200.1	Wheat	cytosol, nucleus, plasma membrane	41.5	33.98
VIT_12s0028g01640.t01	Wine grape	plasma membrane	38.27	33.89
VIT_12s0028g01460.t01	Wine grape	plasma membrane	42.86	32.43
TraesCS7A01G354700.1	Wheat	plastid	38.78	32.11
VIT_12s0028g01430.t01	Wine grape	plasma membrane	43.2	31.79
Zm00001d025065_P001	Maize	cytosol	38.78	31.71
PGSC0003DMT400044620	Potato	cytosol	27.55	31.46
HORVU5Hr1G000910.1	Barley	endoplasmic reticulum, plasma membrane	41.84	30.79
PGSC0003DMT400044522	Potato	cytosol, nucleus, plasma membrane	38.1	30.77
VIT_12s0028g01530.t01	Wine grape	plasma membrane	44.05	30.76
KXG27741	Sorghum	endoplasmic reticulum, extracellular, plasma membrane	40.82	30.65
PGSC0003DMT400044506	Potato	plasma membrane	28.06	30.5
PGSC0003DMT400044673	Potato	plasma membrane	42.86	30.29
TraesCS7D01G368100.1	Wheat	plasma membrane	42.69	29.85
HORVU2Hr1G124250.1	Barley	endoplasmic reticulum, plasma membrane	40.31	29.77
HORVU2Hr1G124190.2	Barley	endoplasmic reticulum, plasma membrane	40.31	29.77
Solyc07g055430.1.1	Tomato	cytosol	6.12	29.75
VIT_12s0028g01280.t01	Wine grape	plasma membrane	43.54	29.73
KXG37964	Sorghum	endoplasmic reticulum, golgi, vacuole	40.82	29.7
EER88498	Sorghum	plasma membrane	42.35	29.64
TraesCS2A01G580900.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	39.97	29.6
OQU80090	Sorghum	plasma membrane	39.12	29.26
Solyc07g055570.1.1	Tomato	cytosol	9.01	29.12
HORVU7Hr1G089080.11	Barley	plasma membrane	41.16	28.88
PGSC0003DMT400044515	Potato	plasma membrane	40.31	28.38
PGSC0003DMT400044608	Potato	plasma membrane	40.48	28.3
PGSC0003DMT400096753	Potato	plasma membrane	39.97	28.21
Solyc02g072070.2.1	Tomato	plasma membrane	37.76	27.96
VIT_12s0028g01650.t01	Wine grape	plasma membrane	39.63	27.67
PGSC0003DMT400044528	Potato	plasma membrane	39.8	27.66
PGSC0003DMT400044668	Potato	plasma membrane	39.29	27.43
GSMUA_Achr7P10190_001	Banana	plasma membrane	31.97	27.41
PGSC0003DMT400073253	Potato	plasma membrane	38.78	27.37
VIT_12s0028g01630.t01	Wine grape	plastid	41.5	27.29
PGSC0003DMT400044503	Potato	extracellular, plasma membrane, vacuole	37.59	26.79
TraesCS2D01G591000.1	Wheat	plasma membrane	25.0	25.43
GSMUA_Achr9P29120_001	Banana	plasma membrane	28.57	23.7
GSMUA_Achr4P02510_001	Banana	plasma membrane	28.91	23.42
GSMUA_Achr2P14690_001	Banana	plasma membrane	26.36	22.37
VIT_12s0028g01270.t01	Wine grape	plasma membrane	44.05	21.01
GSMUA_Achr10P...	Banana	plasma membrane	24.32	20.69
Solyc07g055640.1.1	Tomato	cytosol	28.57	20.46
VIT_12s0028g01520.t01	Wine grape	plasma membrane	44.9	19.98
GSMUA_AchrUn_...	Banana	plasma membrane	12.07	19.72
GSMUA_Achr9P27140_001	Banana	plastid	25.0	19.27
GSMUA_Achr5P09860_001	Banana	plasma membrane	17.52	16.25
GSMUA_Achr5P06120_001	Banana	cytosol, plasma membrane, vacuole	19.22	13.29

Protein Annotations

Gene3D:1.10.510.10	Gene3D:2.90.10.10	Gene3D:3.30.200.20	MapMan:50.2.7	InterPro:Bulb-type_lectin_dom	InterPro:Bulb-type_lectin_dom_sf
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr6G05570_001	EnsemblPlants:GSMUA_Achr6P05570_001	EnsemblPlants:GSMUA_Achr6T05570_001	InterPro:IPR000719
InterPro:IPR001480	InterPro:IPR036426	InterPro:Kinase-like_dom_sf	UniProt:M0T4F5	PFAM:PF00069	PFAM:PF01453
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50927	PANTHER:PTHR27002	PANTHER:PTHR27002:SF178
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00108	SMART:SM00220	SUPFAM:SSF51110	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002950714	:	:	:	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr6G05570_001]

Coordinates

chr6:+:3753493..3757319

Molecular Weight (calculated)

65572.8 Da

IEP (calculated)

7.111

GRAVY (calculated)

-0.314

Length

588 amino acids

Sequence
(BLAST)

001: MSSLSFRLFQ YLTSSLSITE KEFSTFRRRS PNFFGPTFAC GFYCKDACTS FLFAVFAVYT NSGGGITMTN LAPPQVVWSA NRDRLVGTNA TLHLTAGGDL
101: ILRGTDGTAV WPAGRSVVGM NITESGNLVL FDQDGKLVWQ SFDHPTDSLV LGQMIGNPTW DSCKQACLKN CSCRAALFQY SGNVSDGNCF LPLQLFSKRS
201: REEEEDDFQQ VQGMPTRFAF EELKLATENF SKKLGEGGFG TVYQGKIGDE KVAVKRLDGV GQGKREFLAE VETIGSIHHI NLVRLIGFCA EKSHRLLVYE
301: YMCNGSVDRW IFSKGQHSTL NWHMKRKIIV DIAKGLSYLH EECRQRIAHL DIKPQNILLD DRFNAKVSDF GLSKLIDRDQ EQVDIYSFGV VIIEIVCGRK
401: NLDYSQPEES VHLIRDQHKM NRGQKSLSLL PSKSIHVTED DDDHVPLIIE HMHMPTSTSF SVSIPPPLRD GNTTTPLASA SPIGSPSTSL HPMSSPFMDQ
501: SSPTANVQAV SRRVSDGLLT KFPDTSEFDF EYEKSSLWSP PVRCATSLSS EGEVLAELRA STAGRRRSPL NKVFRCFHSE EGRWHGGR

Best Arabidopsis Sequence Match ( AT1G34300.1 )
(BLAST)

001: MAVKTPFLKL LPLLLLLLHF PFSFSTIPLG SVIYASGSNQ NWPSPNSTFS VSFVPSPSPN SFLAAVSFAG SVPIWSAGTV DSRGSLRLHT SGSLRLTNGS
101: GTTVWDSKTD RLGVTSGSIE DTGEFILLNN RSVPVWSSFD NPTDTIVQSQ NFTAGKILRS GLYSFQLERS GNLTLRWNTS AIYWNHGLNS SFSSNLSSPR
201: LSLQTNGVVS IFESNLLGGA EIVYSGDYGD SNTFRFLKLD DDGNLRIYSS ASRNSGPVNA HWSAVDQCLV YGYCGNFGIC SYNDTNPICS CPSRNFDFVD
301: VNDRRKGCKR KVELSDCSGN TTMLDLVHTR LFTYEDDPNS ESFFAGSSPC RANCLSSVLC LASVSMSDGS GNCWQKHPGS FFTGYQWPSV PSTSYVKVCG
401: PVVANTLERA TKGDDNNSKV HLWIVAVAVI AGLLGLVAVE IGLWWCCCRK NPRFGTLSSH YTLLEYASGA PVQFTYKELQ RCTKSFKEKL GAGGFGTVYR
501: GVLTNRTVVA VKQLEGIEQG EKQFRMEVAT ISSTHHLNLV RLIGFCSQGR HRLLVYEFMR NGSLDNFLFT TDSAKFLTWE YRFNIALGTA KGITYLHEEC
601: RDCIVHCDIK PENILVDDNF AAKVSDFGLA KLLNPKDNRY NMSSVRGTRG YLAPEWLANL PITSKSDVYS YGMVLLELVS GKRNFDVSEK TNHKKFSIWA
701: YEEFEKGNTK AILDTRLSED QTVDMEQVMR MVKTSFWCIQ EQPLQRPTMG KVVQMLEGIT EIKNPLCPKT ISEVSFSGNS MSTSHASMFV ASGPTRSSSF
801: SATRSFQTMG ITSSGPASTR ISEGSMLGS

Arabidopsis Description

G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300 [Source:UniProtKB/Swiss-Prot;Acc:Q9XID3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.