Factsheet for Solyc06g008890.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 2
plasma membrane 8
extracellular 4
endoplasmic reticulum 4
vacuole 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	plasma membrane
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400056565	Potato	plasma membrane	87.45	95.51
VIT_11s0016g04840.t01	Wine grape	plasma membrane	61.52	66.44
KRH03737	Soybean	plasma membrane	57.2	62.05
KRH56640	Soybean	golgi, plasma membrane	49.18	60.97
KRH63022	Soybean	plasma membrane	54.94	60.82
KRH54870	Soybean	plasma membrane	56.38	60.35
AT5G20050.1	Thale cress	plasma membrane	54.12	58.19
CDX70909	Canola	plasma membrane	50.82	56.14
PGSC0003DMT400037904	Potato	plasma membrane, vacuole	49.79	50.95
KXG19268	Sorghum	plasma membrane	45.88	49.01
TraesCS7A01G091000.1	Wheat	plasma membrane	45.27	48.46
TraesCS4A01G390900.1	Wheat	plasma membrane	45.47	48.36
Zm00001d045388_P001	Maize	plasma membrane	44.44	48.0
Os06t0142650-00	Rice	plasma membrane	45.47	47.94
TraesCS7D01G086800.1	Wheat	plasma membrane	42.59	46.1
HORVU7Hr1G020720.3	Barley	plasma membrane	42.59	45.0
Solyc07g055410.1.1	Tomato	cytosol	7.2	43.21
Bra020082.1-P	Field mustard	plasma membrane	55.35	38.93
Solyc07g055580.1.1	Tomato	plasma membrane	23.05	38.1
Solyc07g055430.1.1	Tomato	cytosol	9.47	38.02
Solyc07g055670.1.1	Tomato	cytosol	18.52	37.97
CDY45109	Canola	plasma membrane	55.76	37.85
Bra006536.1-P	Field mustard	plasma membrane, vacuole	48.56	37.46
Solyc07g055400.1.1	Tomato	cytosol	18.11	37.45
Solyc07g055630.2.1	Tomato	cytosol	21.19	32.49
Solyc07g055570.1.1	Tomato	cytosol	12.14	32.42
Solyc07g055420.1.1	Tomato	cytosol	14.4	32.11
Solyc07g055650.1.1	Tomato	cytosol, plasma membrane, plastid	27.37	31.67
Os01t0648600-00	Rice	plasma membrane	32.72	31.42
EES01170	Sorghum	plasma membrane, plastid	31.28	30.1
GSMUA_Achr5P06120_001	Banana	cytosol, plasma membrane, vacuole	44.44	25.41
OQU79589	Sorghum	plasma membrane	32.51	25.24
Solyc08g059730.1.1	Tomato	plasma membrane	32.1	19.31
Solyc06g036470.1.1	Tomato	plasma membrane	31.69	18.64
Solyc04g015460.2.1	Tomato	endoplasmic reticulum, plasma membrane, vacuole	32.3	18.07
Solyc02g072070.2.1	Tomato	plasma membrane	29.42	18.01
Solyc03g007790.2.1	Tomato	plasma membrane	31.48	17.71
Solyc11g013880.1.1	Tomato	plasma membrane	29.63	17.2
CDX88861	Canola	endoplasmic reticulum	48.97	16.94
Solyc07g055640.1.1	Tomato	cytosol	26.13	15.47
CDX70911	Canola	mitochondrion	0.41	0.61
Bra006538.1-P	Field mustard	mitochondrion	0.41	0.61

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.24.2	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
UniProt:K4C3R9	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27002	PANTHER:PTHR27002:SF75	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:Solyc06g008890.2	EnsemblPlants:Solyc06g008890.2.1	TMHMM:TMhelix	UniParc:UPI0002766AF9	SEG:seg

Description

No Description!

Coordinates

chr6:+:2833412..2835080

Molecular Weight (calculated)

54136.3 Da

IEP (calculated)

9.105

GRAVY (calculated)

0.005

Length

486 amino acids

Sequence
(BLAST)

001: MEDKKAYSLA ISLVILLITL IVIARITLKY SEAFFLIFGA DIALIIGVLA GVLIRRKLNN RKLLLENQLD SDGRELRIEY SFLRKVAGVP TRFKLKELEE
101: ATDNFGSLIG RGSSACVFKG VLSDGASVAV KRIDGEERGD KEFKSEVAAI ASVQHVNLVR LLGYCSVPPS GPRFLVYEYI VNGSLDNWIF RKRGIRGCLS
201: LDLRCRVSLD VAKALSYLHH DCRSCILHLD VKPENILLDE NHRAILADFG LSKLMGKDES RVVTTIRGTR GYLAPEWLLE NGISEKSDVY SYGMVLLELI
301: GGRRNITLAE NGKSTNSKSK FSYFPKIVSE KLEQGKIMEV VDERLVHEAA TGGVAVEMQV KRLACVALSC IQERPSLRPT MARVVEMLEG RVLVEAPTQT
401: TMMILDLLDE GVDHHPGLPR VAAAMARSTD TNSLRSYTMS ILSGRLFMDY KAYMFKLIRV DLSNTLPSPP HRVRKVERGQ DSIGTQ

Best Arabidopsis Sequence Match ( AT5G20050.1 )
(BLAST)

001: MEDKKANIIA TILILALVVV IIAARVSLKL SKTFYLIAGV DISLILAVIC FLIIRSRYNK ERKLLVSRFA SEGRELRIEY SFLRKVAGVP TKFKLEDLEE
101: ATDGFRSLIG KGGSGSVFKG VLKDGSQVAV KRIEGEEKGE REFRSEVAAI ASVQHKNLVR LYGYSSSTSA NRPRFLVYDY IVNSSLDIWI FPDRGNRGRS
201: GGGCLSWEQR YQVAIDVAKA LAYLHHDCRS KILHLDVKPE NILLDENFRA VVTDFGLSKL IARDESRVLT DIRGTRGYLA PEWLLEHGIS EKSDVYSYGI
301: VLLEMIGGRR SISRVEVKET KKKKLEYFPR IVNQKMRERK IMEIVDQRLI EVNEVDEEEV MKLVCVALWC IQEKSKKRPD MTMVIEMLEG RVPVNEPPDS
401: DVVVVDLLAA DDDDASTGVR RVVNIPKLQI HRERNFRLSS ICSSIISPIS PR

Arabidopsis Description

Probable receptor-like protein kinase At5g20050 [Source:UniProtKB/Swiss-Prot;Acc:Q94C25]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.