Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 5
- golgi 5
- plasma membrane 8
- endoplasmic reticulum 5
- vacuole 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY42395 | Canola | plasma membrane | 97.22 | 97.22 |
| AT1G55910.1 | Thale cress | plasma membrane | 86.73 | 86.2 |
| PGSC0003DMT400057089 | Potato | plasma membrane | 65.12 | 60.46 |
| Solyc07g065380.2.1 | Tomato | plasma membrane | 65.12 | 60.29 |
| VIT_19s0015g00230.t01 | Wine grape | plasma membrane | 63.58 | 59.37 |
| VIT_19s0015g00210.t01 | Wine grape | plasma membrane | 62.65 | 58.84 |
| VIT_19s0015g00190.t01 | Wine grape | plasma membrane | 62.65 | 58.67 |
| VIT_19s0015g00250.t01 | Wine grape | plasma membrane | 63.27 | 58.57 |
| KRH46349 | Soybean | plasma membrane | 61.42 | 57.02 |
| KRG98522 | Soybean | plasma membrane | 62.04 | 55.83 |
| CDY48680 | Canola | plasma membrane | 54.01 | 49.16 |
| CDY53449 | Canola | plasma membrane | 54.01 | 49.16 |
Protein Annotations
| MapMan:24.2.11.1 | GO:A0A078FC24 | UniProt:A0A078FC24 | EnsemblPlants:CDY10522 | ProteinID:CDY10522 | ProteinID:CDY10522.1 |
| GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0030001 | GO:GO:0046873 | GO:GO:0055085 | EnsemblPlantsGene:GSBRNA2T00032474001 | PFAM:PF02535 |
| PANTHER:PTHR11040 | PANTHER:PTHR11040:SF23 | SignalP:SignalP-TM | TMHMM:TMhelix | UniParc:UPI0004EC8C71 | InterPro:ZIP |
| SEG:seg | : | : | : | : | : |
Description
BnaC03g70920DBnaC03g70920D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FC24]
Coordinates
chrLK032004:-:128379..129584
Molecular Weight (calculated)
35061.0 Da
IEP (calculated)
5.055
GRAVY (calculated)
0.692
Length
324 amino acids
Sequence
(BLAST)
(BLAST)
001: MSRPLVFFFF FLFLVLVVPC LSHGGGGDHD DDEAPPAKSS DLKSKSLITV KIACLVIIFV LTFISGVSPY FLKWSQGFLV LGTQFAGGVF LATALMHFLS
101: DADETFRDLL TAEGESEPSP AYPFAYMLAC TGYMLTMLAD SVIAHVYSKT PSKDVELQGE EKPNQGSGIG DSILLIVALC FHSVFEGIAI GISETKADAW
201: RALWTITLHK VFAAIAMGIA LLRMIPDRPL LSSIMYSFAF AISSPIGVAI GIVIDATTQG TVADWIFAVS MSFACGVFVY VSVNHLLAKG YLPNQKVNVD
301: EPRFKFLAVL SGVVVIAIVM IWDT
101: DADETFRDLL TAEGESEPSP AYPFAYMLAC TGYMLTMLAD SVIAHVYSKT PSKDVELQGE EKPNQGSGIG DSILLIVALC FHSVFEGIAI GISETKADAW
201: RALWTITLHK VFAAIAMGIA LLRMIPDRPL LSSIMYSFAF AISSPIGVAI GIVIDATTQG TVADWIFAVS MSFACGVFVY VSVNHLLAKG YLPNQKVNVD
301: EPRFKFLAVL SGVVVIAIVM IWDT
001: MSRSLVFFFL FLVLVVPCLS HGTGGDHDDD EASHVKSSDL KSKSLISVKI ACLVIIFVLT FISGVSPYFL KWSQGFLVLG TQFAGGVFLA TALMHFLSDA
101: DETFRGLLTA EGESEPSPAY PFAYMLACAG FMLTMLADSV IAHIYSKTQN DLELQGEDKS NQRSATTETS IGDSILLIVA LCFHSVFEGI AIGISETKSD
201: AWRALWTITL HKIFAAIAMG IALLRMIPDR PLFSSITYSF AFAISSPIGV AIGIVIDATT QGSIADWIFA LSMSLACGVF VYVSVNHLLA KGYRPNKKVH
301: VDEPRYKFLA VLFGVVVIAI VMIWDT
101: DETFRGLLTA EGESEPSPAY PFAYMLACAG FMLTMLADSV IAHIYSKTQN DLELQGEDKS NQRSATTETS IGDSILLIVA LCFHSVFEGI AIGISETKSD
201: AWRALWTITL HKIFAAIAMG IALLRMIPDR PLFSSITYSF AFAISSPIGV AIGIVIDATT QGSIADWIFA LSMSLACGVF VYVSVNHLLA KGYRPNKKVH
301: VDEPRYKFLA VLFGVVVIAI VMIWDT
Arabidopsis Description
ZIP11Zinc transporter 11 [Source:UniProtKB/Swiss-Prot;Acc:Q94EG9]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.