Factsheet for AT1G55910.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
golgi 5
endoplasmic reticulum 5
plasma membrane 6
vacuole 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	endoplasmic reticulum, extracellular, golgi
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY42395	Canola	plasma membrane	86.81	87.35
Bra030826.1-P	Field mustard	plasma membrane	86.5	87.04
CDY10522	Canola	plasma membrane	86.2	86.73
PGSC0003DMT400057089	Potato	plasma membrane	64.11	59.89
Solyc07g065380.2.1	Tomato	plasma membrane	64.11	59.71
VIT_19s0015g00230.t01	Wine grape	plasma membrane	63.19	59.37
VIT_19s0015g00190.t01	Wine grape	plasma membrane	62.27	58.67
VIT_19s0015g00250.t01	Wine grape	plasma membrane	62.58	58.29
VIT_19s0015g00210.t01	Wine grape	plasma membrane	61.66	58.26
KRH46349	Soybean	plasma membrane	59.51	55.59
KRG98522	Soybean	plasma membrane	60.74	55.0
AT5G59520.1	Thale cress	plasma membrane	53.68	49.58

Protein Annotations

MapMan:24.2.11.1	EntrezGene:842041	ProteinID:AAF79317.1	ProteinID:AAL67953.1	ProteinID:AEE33318.1	EMBL:AF367763
EMBL:AF410328	ArrayExpress:AT1G55910	EnsemblPlantsGene:AT1G55910	RefSeq:AT1G55910	TAIR:AT1G55910	RefSeq:AT1G55910-TAIR-G
EnsemblPlants:AT1G55910.1	TAIR:AT1G55910.1	EMBL:AY093733	GO:GO:0003674	GO:GO:0005215	GO:GO:0005385
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006810	GO:GO:0006811	GO:GO:0006829
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0030001	GO:GO:0046873	GO:GO:0055085
GO:GO:0071577	RefSeq:NP_564703.1	PFAM:PF02535	PO:PO:0000013	PO:PO:0000037	PO:PO:0000230
PO:PO:0000293	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004507
PO:PO:0007064	PO:PO:0007095	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123
PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009
PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032
PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100
PO:PO:0020137	PO:PO:0025022	PO:PO:0025281	PANTHER:PTHR11040	PANTHER:PTHR11040:SF23	UniProt:Q94EG9
SignalP:SignalP-TM	TMHMM:TMhelix	UniParc:UPI000009F28E	InterPro:ZIP	Symbol:ZIP11	SEG:seg

Description

ZIP11Zinc transporter 11 [Source:UniProtKB/Swiss-Prot;Acc:Q94EG9]

Coordinates

chr1:+:20905914..20907414

Molecular Weight (calculated)

35463.4 Da

IEP (calculated)

6.021

GRAVY (calculated)

0.638

Length

326 amino acids

Sequence
(BLAST)

001: MSRSLVFFFL FLVLVVPCLS HGTGGDHDDD EASHVKSSDL KSKSLISVKI ACLVIIFVLT FISGVSPYFL KWSQGFLVLG TQFAGGVFLA TALMHFLSDA
101: DETFRGLLTA EGESEPSPAY PFAYMLACAG FMLTMLADSV IAHIYSKTQN DLELQGEDKS NQRSATTETS IGDSILLIVA LCFHSVFEGI AIGISETKSD
201: AWRALWTITL HKIFAAIAMG IALLRMIPDR PLFSSITYSF AFAISSPIGV AIGIVIDATT QGSIADWIFA LSMSLACGVF VYVSVNHLLA KGYRPNKKVH
301: VDEPRYKFLA VLFGVVVIAI VMIWDT

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.