CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 8
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra030826.1-P	Field mustard	plasma membrane	98.15	98.15
CDY10522	Canola	plasma membrane	97.22	97.22
AT1G55910.1	Thale cress	plasma membrane	87.35	86.81
PGSC0003DMT400057089	Potato	plasma membrane	65.43	60.74
Solyc07g065380.2.1	Tomato	plasma membrane	65.43	60.57
VIT_19s0015g00230.t01	Wine grape	plasma membrane	63.89	59.65
VIT_19s0015g00210.t01	Wine grape	plasma membrane	62.96	59.13
VIT_19s0015g00190.t01	Wine grape	plasma membrane	62.96	58.96
VIT_19s0015g00250.t01	Wine grape	plasma membrane	63.58	58.86
KRH46349	Soybean	plasma membrane	61.73	57.31
KRG98522	Soybean	plasma membrane	62.65	56.39
CDY48680	Canola	plasma membrane	54.32	49.44
CDY53449	Canola	plasma membrane	54.32	49.44

Protein Annotations

MapMan:24.2.11.1	GO:A0A078HV53	UniProt:A0A078HV53	EnsemblPlants:CDY42395	ProteinID:CDY42395	ProteinID:CDY42395.1
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0030001	GO:GO:0046873	GO:GO:0055085	EnsemblPlantsGene:GSBRNA2T00074682001	PFAM:PF02535
PANTHER:PTHR11040	PANTHER:PTHR11040:SF23	SignalP:SignalP-TM	TMHMM:TMhelix	UniParc:UPI0004EE9D24	InterPro:ZIP
SEG:seg	:	:	:	:	:

Description

BnaA08g00190DBnaA08g00190D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HV53]

Coordinates

chrLK032523:+:120439..121663

Molecular Weight (calculated)

35042.2 Da

IEP (calculated)

5.873

GRAVY (calculated)

0.710

Length

324 amino acids

Sequence
(BLAST)

001: MSRPLVFFFF FLFLVLVVPC LSHGGGGDHD DDEAPPAKTS DLKSKSLITV KIACLVIIFV LTFISGVSPY FLKWSQAFLV LGTQFAGGVF LATALMHFLS
101: DADETFRDLL TAEGESEPSP AYPFAYMLAC AGYMLTMLAD SVIAHVYSKT PSKDVELQGA EKPNQGSGIG DSILLIVALC FHSVFEGIAI GISETKADAW
201: RALWTITLHK VFAAIAMGIA LLRMIPDRPL FSSIMYSFAF AISSPIGVAI GIVIDATTQG KVADWIFALS MSLACGVFVY VSVNHLLAKG YLPNKKVNVD
301: EPRFKFLAVL SGVVVIAIVM IWDT

Best Arabidopsis Sequence Match ( AT1G55910.1 )
(BLAST)

001: MSRSLVFFFL FLVLVVPCLS HGTGGDHDDD EASHVKSSDL KSKSLISVKI ACLVIIFVLT FISGVSPYFL KWSQGFLVLG TQFAGGVFLA TALMHFLSDA
101: DETFRGLLTA EGESEPSPAY PFAYMLACAG FMLTMLADSV IAHIYSKTQN DLELQGEDKS NQRSATTETS IGDSILLIVA LCFHSVFEGI AIGISETKSD
201: AWRALWTITL HKIFAAIAMG IALLRMIPDR PLFSSITYSF AFAISSPIGV AIGIVIDATT QGSIADWIFA LSMSLACGVF VYVSVNHLLA KGYRPNKKVH
301: VDEPRYKFLA VLFGVVVIAI VMIWDT

Arabidopsis Description

ZIP11Zinc transporter 11 [Source:UniProtKB/Swiss-Prot;Acc:Q94EG9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.