Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 8
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY53449 | Canola | plasma membrane | 96.91 | 96.91 |
| Bra020314.1-P | Field mustard | plasma membrane | 96.63 | 96.63 |
| AT5G59520.1 | Thale cress | plasma membrane | 76.69 | 77.34 |
| VIT_06s0004g05070.t01 | Wine grape | plasma membrane | 56.46 | 61.47 |
| PGSC0003DMT400005506 | Potato | plasma membrane | 53.37 | 56.89 |
| Solyc06g005620.2.1 | Tomato | plasma membrane | 53.65 | 56.68 |
| CDY42395 | Canola | plasma membrane | 49.44 | 54.32 |
| CDY10522 | Canola | plasma membrane | 49.16 | 54.01 |
| KRH10230 | Soybean | plasma membrane | 51.69 | 53.33 |
| Os01t0972200-00 | Rice | plasma membrane | 52.53 | 53.12 |
| TraesCS3D01G532400.1 | Wheat | plasma membrane | 52.25 | 52.84 |
| GSMUA_Achr7P15050_001 | Banana | plasma membrane | 49.44 | 52.69 |
| TraesCS3A01G527000.1 | Wheat | plasma membrane | 52.25 | 52.69 |
| TraesCS3B01G595100.1 | Wheat | plasma membrane | 51.69 | 51.83 |
| KRH10232 | Soybean | plasma membrane | 49.72 | 51.75 |
| KRH23102 | Soybean | plasma membrane | 50.56 | 51.43 |
| Zm00001d041959_P001 | Maize | plasma membrane | 49.44 | 50.0 |
| HORVU3Hr1G114990.3 | Barley | plasma membrane | 50.0 | 50.0 |
| EES04298 | Sorghum | plasma membrane | 50.56 | 49.86 |
| KXG39153 | Sorghum | plasma membrane | 49.72 | 49.44 |
| GSMUA_Achr8P26320_001 | Banana | plasma membrane | 48.03 | 48.86 |
| Zm00001d029497_P001 | Maize | mitochondrion, plasma membrane | 49.16 | 48.34 |
| TraesCS6A01G099800.1 | Wheat | plasma membrane | 47.75 | 47.09 |
| Os03t0411800-01 | Rice | plasma membrane | 46.91 | 46.65 |
| TraesCS6B01G128000.1 | Wheat | plasma membrane | 47.47 | 46.43 |
| TraesCS6D01G082600.1 | Wheat | plasma membrane | 47.19 | 46.15 |
| KRH23101 | Soybean | plasma membrane | 23.88 | 42.5 |
| TraesCS5A01G256100.1 | Wheat | plasma membrane | 38.48 | 34.25 |
| HORVU6Hr1G018070.11 | Barley | vacuole | 25.84 | 25.7 |
| HORVU5Hr1G071590.3 | Barley | plasma membrane | 25.84 | 25.56 |
Protein Annotations
| MapMan:24.2.11.1 | GO:A0A078ICQ9 | UniProt:A0A078ICQ9 | EnsemblPlants:CDY48680 | ProteinID:CDY48680 | ProteinID:CDY48680.1 |
| GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0030001 | GO:GO:0046873 | GO:GO:0055085 | EnsemblPlantsGene:GSBRNA2T00091553001 | PFAM:PF02535 |
| PANTHER:PTHR11040 | PANTHER:PTHR11040:SF23 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0004EE4C77 | InterPro:ZIP |
| SEG:seg | : | : | : | : | : |
Description
BnaC02g09920DBnaC02g09920D protein [Source:UniProtKB/TrEMBL;Acc:A0A078ICQ9]
Coordinates
chrLK032786:+:56501..58289
Molecular Weight (calculated)
38725.1 Da
IEP (calculated)
6.927
GRAVY (calculated)
0.520
Length
356 amino acids
Sequence
(BLAST)
(BLAST)
001: MAFSSKTLRS TLFFLSIVFL CFSLILAHGG SDHDEEEEAA GANQPPPAAG TTVVDLRSKS LVRVKIYCLI ILFFSTFLAG ISPYFYRWNE SFLLLGTQFS
101: GGIFLATALI HFLSDANETF RGLKHKEYPY AFMLAAGGYC LTMLADVAVA FVAAGSSNNI NNVACDPGES RVDVAVEVKE EGRRETGSSV DVNQTILRKS
201: GFGDTALLIV ALCFHSVFEG IAIGVSDTKS DAWRNLWTIS LHKIFAAVAM GIALLKLIPK RPFFLTAVYS FAFGISSPLG VGIGIAINAT SQGAAGDWTY
301: AISMSIACGV FMYVSIHHLI AKGYKPREEC YFDKPIYKFL AVFLGVILLS IVMIWD
101: GGIFLATALI HFLSDANETF RGLKHKEYPY AFMLAAGGYC LTMLADVAVA FVAAGSSNNI NNVACDPGES RVDVAVEVKE EGRRETGSSV DVNQTILRKS
201: GFGDTALLIV ALCFHSVFEG IAIGVSDTKS DAWRNLWTIS LHKIFAAVAM GIALLKLIPK RPFFLTAVYS FAFGISSPLG VGIGIAINAT SQGAAGDWTY
301: AISMSIACGV FMYVSIHHLI AKGYKPREEC YFDKPIYKFL AVFLGVILLS IVMIWD
001: MALSSKTLKS TLFFLSIIFL CFSLILAHGG IDDGDEEEET NQPPPATGTT TVVNLRSKSL VLVKIYCIII LFFSTFLAGV SPYFYRWNES FLLLGTQFSG
101: GIFLATALIH FLSDANETFR GLKHKEYPYA FMLAAAGYCL TMLADVAVAF VAAGSNNNHV GASVGESRED DDVAVKEEGR REIKSGVDVS QALIRTSGFG
201: DTALLIFALC FHSIFEGIAI GLSDTKSDAW RNLWTISLHK VFAAVAMGIA LLKLIPKRPF FLTVVYSFAF GISSPIGVGI GIGINATSQG AGGDWTYAIS
301: MGLACGVFVY VAVNHLISKG YKPREECYFD KPIYKFIAVF LGVALLSVVM IWD
101: GIFLATALIH FLSDANETFR GLKHKEYPYA FMLAAAGYCL TMLADVAVAF VAAGSNNNHV GASVGESRED DDVAVKEEGR REIKSGVDVS QALIRTSGFG
201: DTALLIFALC FHSIFEGIAI GLSDTKSDAW RNLWTISLHK VFAAVAMGIA LLKLIPKRPF FLTVVYSFAF GISSPIGVGI GIGINATSQG AGGDWTYAIS
301: MGLACGVFVY VAVNHLISKG YKPREECYFD KPIYKFIAVF LGVALLSVVM IWD
Arabidopsis Description
ZIP2Zinc transporter 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTH9]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.