Factsheet for Zm00001d041959_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 6
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES04298	Sorghum	plasma membrane	80.68	78.67
Os01t0972200-00	Rice	plasma membrane	67.61	67.61
TraesCS3D01G532400.1	Wheat	plasma membrane	66.19	66.19
TraesCS3B01G595100.1	Wheat	plasma membrane	66.48	65.92
TraesCS3A01G527000.1	Wheat	plasma membrane	63.64	63.46
HORVU3Hr1G114990.3	Barley	plasma membrane	62.78	62.08
VIT_06s0004g05070.t01	Wine grape	plasma membrane	55.97	60.24
GSMUA_Achr7P15050_001	Banana	plasma membrane	56.82	59.88
KRH10230	Soybean	plasma membrane	56.53	57.68
PGSC0003DMT400005506	Potato	plasma membrane	54.55	57.48
Solyc06g005620.2.1	Tomato	plasma membrane	54.83	57.27
KRH23102	Soybean	plasma membrane	56.25	56.57
KRH10232	Soybean	plasma membrane	53.98	55.56
AT5G59520.1	Thale cress	plasma membrane	52.56	52.41
CDY53449	Canola	plasma membrane	50.57	50.0
Zm00001d029497_P001	Maize	mitochondrion, plasma membrane	51.42	50.0
Bra020314.1-P	Field mustard	plasma membrane	50.28	49.72
CDY48680	Canola	plasma membrane	50.0	49.44
KRH23101	Soybean	plasma membrane	25.28	44.5

Protein Annotations

MapMan:24.2.11.1	UniProt:A0A1D6N096	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0006829	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0030001	GO:GO:0046873
GO:GO:0055085	ProteinID:ONM34210.1	PFAM:PF02535	PANTHER:PTHR11040	PANTHER:PTHR11040:SF23	SignalP:SignalP-noTM
TMHMM:TMhelix	UniParc:UPI000842E197	InterPro:ZIP	EnsemblPlantsGene:Zm00001d041959	EnsemblPlants:Zm00001d041959_P001	EnsemblPlants:Zm00001d041959_T001
SEG:seg	:	:	:	:	:

Description

Zinc transporter 2

Coordinates

chr3:+:145848019..145849077

Molecular Weight (calculated)

37903.3 Da

IEP (calculated)

7.023

GRAVY (calculated)

0.481

Length

352 amino acids

Sequence
(BLAST)

001: MRKISRASTL LCTLLLLSGL LCFELACAHG GIDDGDDDTP PAADADPSSV HHHLRSKGLV AVKVWCLVIL LVVTFIGGMS PYFYRWNEAF LLVGTQFAAG
101: VFLGTALMHF LADSTSTFHG LTRNHYPFSY MLACLGFLLT MLADCAVAAV TKRSGGAGAQ RVLNEAAGRE EEEEGDAQTK EDHAPHQHHP MLVRTASFED
201: AVLLIFALCF HSIFEGIAIG VSATKSDAWR NLWTIGLHKV LAAVAMGIAL LRMIPKRPFM TTLAYSLAFA VSSPVGVGIG IGIDATAEGR AADWTFAVSM
301: GFATGVFLYV AINHLIAKGY RPQEQTRVDR PSFKFLAVLV GVAVMAVVMI WG

Best Arabidopsis Sequence Match ( AT5G59520.1 )
(BLAST)

001: MALSSKTLKS TLFFLSIIFL CFSLILAHGG IDDGDEEEET NQPPPATGTT TVVNLRSKSL VLVKIYCIII LFFSTFLAGV SPYFYRWNES FLLLGTQFSG
101: GIFLATALIH FLSDANETFR GLKHKEYPYA FMLAAAGYCL TMLADVAVAF VAAGSNNNHV GASVGESRED DDVAVKEEGR REIKSGVDVS QALIRTSGFG
201: DTALLIFALC FHSIFEGIAI GLSDTKSDAW RNLWTISLHK VFAAVAMGIA LLKLIPKRPF FLTVVYSFAF GISSPIGVGI GIGINATSQG AGGDWTYAIS
301: MGLACGVFVY VAVNHLISKG YKPREECYFD KPIYKFIAVF LGVALLSVVM IWD

Arabidopsis Description

ZIP2Zinc transporter 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTH9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.