Factsheet for Os01t0972200-00

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 6
plasma membrane 8
golgi 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES04298	Sorghum	plasma membrane	72.16	70.36
TraesCS3D01G532400.1	Wheat	plasma membrane	68.75	68.75
TraesCS3B01G595100.1	Wheat	plasma membrane	69.32	68.73
Zm00001d041959_P001	Maize	plasma membrane	67.61	67.61
TraesCS3A01G527000.1	Wheat	plasma membrane	67.05	66.86
HORVU3Hr1G114990.3	Barley	plasma membrane	65.06	64.33
GSMUA_Achr7P15050_001	Banana	plasma membrane	60.23	63.47
VIT_06s0004g05070.t01	Wine grape	plasma membrane	57.67	62.08
PGSC0003DMT400005506	Potato	plasma membrane	57.67	60.78
Solyc06g005620.2.1	Tomato	plasma membrane	57.1	59.64
KRH10232	Soybean	plasma membrane	56.82	58.48
KRH10230	Soybean	plasma membrane	56.82	57.97
KRH23102	Soybean	plasma membrane	57.1	57.43
AT5G59520.1	Thale cress	plasma membrane	53.98	53.82
CDY53449	Canola	plasma membrane	53.69	53.09
Bra020314.1-P	Field mustard	plasma membrane	53.41	52.81
CDY48680	Canola	plasma membrane	53.12	52.53
Os03t0411800-01	Rice	plasma membrane	51.99	51.12
KRH23101	Soybean	plasma membrane	25.85	45.5

Protein Annotations

MapMan:24.2.11.1	EntrezGene:4326394	EMBL:AY302058	ProteinID:BAB63683.1	ProteinID:BAF07454.1	ProteinID:BAS76436.1
GO:GO:0003674	GO:GO:0005215	GO:GO:0005385	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0006810	GO:GO:0006811	GO:GO:0006829	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
GO:GO:0030001	GO:GO:0046873	GO:GO:0055085	GO:GO:0071577	EnsemblPlantsGene:Os01g0972200	EnsemblPlants:Os01t0972200-00
PFAM:PF02535	PFscan:PS51257	PANTHER:PTHR11040	PANTHER:PTHR11040:SF23	UniProt:Q94DG6	SignalP:SignalP-TM
TMHMM:TMhelix	UniParc:UPI00000A3A9D	RefSeq:XP_015633357.1	InterPro:ZIP	SEG:seg	:

Description

ZINC TRANSPORTER 1Similar to Zinc transporter 2 precursor (ZRT/IRT-like protein 2). (Os01t0972200-00)

Coordinates

chr1:-:42905570..42907462

Molecular Weight (calculated)

37449.1 Da

IEP (calculated)

8.889

GRAVY (calculated)

0.659

Length

352 amino acids

Sequence
(BLAST)

001: MARTMTMRVS SLLVAVVLLA ALSFQACSGH GGINDGDGQV DAPATPASSS GVRSKGLIAV KVWCLVILLV FTFAGGVSPY FYRWNESFLL LGTQFAAGVF
101: LGTALMHFLA DSTSTFKGLT TNQYPFSFML TCVGFLLTML SDLVIAAVAR RSAAAGVSDN QVSEQQQRQQ AEGAVMSRKE EEAAAVAHPA MLVRTSSFED
201: AVLLIVALCF HSVFEGIAIG VSASKSEAWR NLWTIGLHKI FAAVAMGIAL LRMIPKRPFL MTVVYSLAFA VSSPVGVGIG IAIDATSQGR AADWTYAISM
301: GLATGVFIYV AINHLIAKGY RPHHPTAADK PLFKFLAVLL GVAVMAVVMI WD

Best Arabidopsis Sequence Match ( AT5G59520.1 )
(BLAST)

001: MALSSKTLKS TLFFLSIIFL CFSLILAHGG IDDGDEEEET NQPPPATGTT TVVNLRSKSL VLVKIYCIII LFFSTFLAGV SPYFYRWNES FLLLGTQFSG
101: GIFLATALIH FLSDANETFR GLKHKEYPYA FMLAAAGYCL TMLADVAVAF VAAGSNNNHV GASVGESRED DDVAVKEEGR REIKSGVDVS QALIRTSGFG
201: DTALLIFALC FHSIFEGIAI GLSDTKSDAW RNLWTISLHK VFAAVAMGIA LLKLIPKRPF FLTVVYSFAF GISSPIGVGI GIGINATSQG AGGDWTYAIS
301: MGLACGVFVY VAVNHLISKG YKPREECYFD KPIYKFIAVF LGVALLSVVM IWD

Arabidopsis Description

ZIP2Zinc transporter 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTH9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.