Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- golgi 3
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G532400.1 | Wheat | plasma membrane | 93.24 | 94.03 |
| TraesCS3A01G527000.1 | Wheat | plasma membrane | 89.58 | 90.08 |
| HORVU3Hr1G114990.3 | Barley | plasma membrane | 83.66 | 83.43 |
| Os01t0972200-00 | Rice | plasma membrane | 68.73 | 69.32 |
| EES04298 | Sorghum | plasma membrane | 69.01 | 67.87 |
| Zm00001d041959_P001 | Maize | plasma membrane | 65.92 | 66.48 |
| VIT_06s0004g05070.t01 | Wine grape | plasma membrane | 57.75 | 62.69 |
| PGSC0003DMT400005506 | Potato | plasma membrane | 57.75 | 61.38 |
| GSMUA_Achr7P15050_001 | Banana | plasma membrane | 57.46 | 61.08 |
| Solyc06g005620.2.1 | Tomato | plasma membrane | 57.18 | 60.24 |
| KRH23102 | Soybean | plasma membrane | 54.93 | 55.71 |
| KRH10232 | Soybean | plasma membrane | 53.52 | 55.56 |
| KRH10230 | Soybean | plasma membrane | 53.8 | 55.36 |
| AT5G59520.1 | Thale cress | plasma membrane | 53.24 | 53.54 |
| CDY53449 | Canola | plasma membrane | 52.39 | 52.25 |
| Bra020314.1-P | Field mustard | plasma membrane | 52.11 | 51.97 |
| CDY48680 | Canola | plasma membrane | 51.83 | 51.69 |
| TraesCS6B01G128000.1 | Wheat | plasma membrane | 50.7 | 49.45 |
| KRH23101 | Soybean | plasma membrane | 26.2 | 46.5 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G595100.1 | EnsemblPlantsGene:TraesCS3B01G595100 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0006829 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0030001 | GO:GO:0046873 | GO:GO:0055085 |
| InterPro:ZIP | PANTHER:PTHR11040 | PANTHER:PTHR11040:SF23 | PFAM:PF02535 | SEG:seg | SignalP:SignalP-noTM |
| TMHMM:TMhelix | MapMan:24.2.11.1 | : | : | : | : |
Description
No Description!
Coordinates
chr3B:+:818272147..818273461
Molecular Weight (calculated)
38116.7 Da
IEP (calculated)
7.108
GRAVY (calculated)
0.546
Length
355 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKMARSTRR TSNLNSTLLL LSLLLLTCFF QQASGHGGVD HGDGDEDDEG HHGDVGVRGG GLRSRGLIAV KVWCLVILLV FTFLGGVSPY FYRWNEAFLL
101: LGTQFAAGIF LGTALMHFLA GSTSTFNALT HSPYPFSFML ACAGFLLTML SDVAIVAVAN RQRVNQAAPI QKDAEEEGES TSAGPVAAHA HPMLMTATSS
201: FEDAILLIFA LCFHSIFEGI AIGVSATKGE AWRNLWTIGL HKIFAAVAMG IALLRMIPKR PFLMTVLYSL AFAVSSPVGV GIGIAIDATA EGPAADWTYA
301: ISMGIATGIF VYVAINHLMA RGYRPQQPNY FDKPIFKFLG VLTGVAVMAV VMIWD
101: LGTQFAAGIF LGTALMHFLA GSTSTFNALT HSPYPFSFML ACAGFLLTML SDVAIVAVAN RQRVNQAAPI QKDAEEEGES TSAGPVAAHA HPMLMTATSS
201: FEDAILLIFA LCFHSIFEGI AIGVSATKGE AWRNLWTIGL HKIFAAVAMG IALLRMIPKR PFLMTVLYSL AFAVSSPVGV GIGIAIDATA EGPAADWTYA
301: ISMGIATGIF VYVAINHLMA RGYRPQQPNY FDKPIFKFLG VLTGVAVMAV VMIWD
001: MALSSKTLKS TLFFLSIIFL CFSLILAHGG IDDGDEEEET NQPPPATGTT TVVNLRSKSL VLVKIYCIII LFFSTFLAGV SPYFYRWNES FLLLGTQFSG
101: GIFLATALIH FLSDANETFR GLKHKEYPYA FMLAAAGYCL TMLADVAVAF VAAGSNNNHV GASVGESRED DDVAVKEEGR REIKSGVDVS QALIRTSGFG
201: DTALLIFALC FHSIFEGIAI GLSDTKSDAW RNLWTISLHK VFAAVAMGIA LLKLIPKRPF FLTVVYSFAF GISSPIGVGI GIGINATSQG AGGDWTYAIS
301: MGLACGVFVY VAVNHLISKG YKPREECYFD KPIYKFIAVF LGVALLSVVM IWD
101: GIFLATALIH FLSDANETFR GLKHKEYPYA FMLAAAGYCL TMLADVAVAF VAAGSNNNHV GASVGESRED DDVAVKEEGR REIKSGVDVS QALIRTSGFG
201: DTALLIFALC FHSIFEGIAI GLSDTKSDAW RNLWTISLHK VFAAVAMGIA LLKLIPKRPF FLTVVYSFAF GISSPIGVGI GIGINATSQG AGGDWTYAIS
301: MGLACGVFVY VAVNHLISKG YKPREECYFD KPIYKFIAVF LGVALLSVVM IWD
Arabidopsis Description
ZIP2Zinc transporter 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTH9]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.