Factsheet for HORVU3Hr1G114990.3

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 4
golgi 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, secretory
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G532400.1	Wheat	plasma membrane	83.99	84.94
TraesCS3B01G595100.1	Wheat	plasma membrane	83.43	83.66
TraesCS3A01G527000.1	Wheat	plasma membrane	81.74	82.44
Os01t0972200-00	Rice	plasma membrane	64.33	65.06
Zm00001d041959_P001	Maize	plasma membrane	62.08	62.78
EES04298	Sorghum	plasma membrane	63.48	62.6
VIT_06s0004g05070.t01	Wine grape	plasma membrane	55.06	59.94
GSMUA_Achr7P15050_001	Banana	plasma membrane	55.34	58.98
PGSC0003DMT400005506	Potato	plasma membrane	55.06	58.68
Solyc06g005620.2.1	Tomato	plasma membrane	54.49	57.57
KRH10230	Soybean	plasma membrane	52.81	54.49
KRH10232	Soybean	plasma membrane	51.69	53.8
KRH23102	Soybean	plasma membrane	52.53	53.43
AT5G59520.1	Thale cress	plasma membrane	51.69	52.12
Bra020314.1-P	Field mustard	plasma membrane	50.56	50.56
CDY53449	Canola	plasma membrane	50.56	50.56
CDY48680	Canola	plasma membrane	50.0	50.0
KRH23101	Soybean	plasma membrane	26.97	48.0
HORVU6Hr1G018070.11	Barley	vacuole	26.12	25.98
HORVU5Hr1G071590.3	Barley	plasma membrane	25.0	24.72

Protein Annotations

EnsemblPlants:HORVU3Hr1G114990.3	EnsemblPlantsGene:HORVU3Hr1G114990	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0006829	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0030001	GO:GO:0046873
GO:GO:0055085	InterPro:ZIP	PANTHER:PTHR11040	PANTHER:PTHR11040:SF23	PFAM:PF02535	SEG:seg
SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000B474473	UniProt:A0A287MSL1	MapMan:24.2.11.1	:

Description

No Description!

Coordinates

chrchr3H:+:692260254..692262484

Molecular Weight (calculated)

38625.1 Da

IEP (calculated)

7.374

GRAVY (calculated)

0.370

Length

356 amino acids

Sequence
(BLAST)

001: MPKMARSTGR TSKLVCTLLL LSLLLTCLFQ QARGHGGIDH GDGEDDDSGH GDGDAAAVDR SVLRSRGLIA VKVWCLVILL VFTFLGGVSP YFYRWNEAFL
101: LLGTQFAAGI FLGTALMHFL AGSTSTFNAL THSPYPFSFM LACAGFLLTM LSDVAIVAVA SRQRVNRAAP LQKEAEEEGE MASSAVAEHP HPMLMTATSS
201: FEDAILLIFA LCFHSIFEGI AIGVSATKGE AWRNLWTIGL HKIFAAVAMG IALLRMIPKR PFLMTVLYSL AFAVSSPVGV GIGIAIDATA EGRAADWTYA
301: ISMGIATGVF IYVAINHLMA KGYHPHQPNY FDKPIFKFFD TNEPKAWYGE RNTNKS

Best Arabidopsis Sequence Match ( AT5G59520.1 )
(BLAST)

001: MALSSKTLKS TLFFLSIIFL CFSLILAHGG IDDGDEEEET NQPPPATGTT TVVNLRSKSL VLVKIYCIII LFFSTFLAGV SPYFYRWNES FLLLGTQFSG
101: GIFLATALIH FLSDANETFR GLKHKEYPYA FMLAAAGYCL TMLADVAVAF VAAGSNNNHV GASVGESRED DDVAVKEEGR REIKSGVDVS QALIRTSGFG
201: DTALLIFALC FHSIFEGIAI GLSDTKSDAW RNLWTISLHK VFAAVAMGIA LLKLIPKRPF FLTVVYSFAF GISSPIGVGI GIGINATSQG AGGDWTYAIS
301: MGLACGVFVY VAVNHLISKG YKPREECYFD KPIYKFIAVF LGVALLSVVM IWD

Arabidopsis Description

ZIP2Zinc transporter 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTH9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.