Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 9
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400005506 | Potato | plasma membrane | 95.85 | 96.71 |
| VIT_06s0004g05070.t01 | Wine grape | plasma membrane | 68.84 | 70.95 |
| GSMUA_Achr7P15050_001 | Banana | plasma membrane | 66.77 | 67.37 |
| KRH23102 | Soybean | plasma membrane | 66.47 | 64.0 |
| KRH10230 | Soybean | plasma membrane | 64.69 | 63.19 |
| KRH10232 | Soybean | plasma membrane | 63.8 | 62.87 |
| TraesCS3D01G532400.1 | Wheat | plasma membrane | 60.24 | 57.67 |
| TraesCS3B01G595100.1 | Wheat | plasma membrane | 60.24 | 57.18 |
| Os01t0972200-00 | Rice | plasma membrane | 59.64 | 57.1 |
| Solyc07g065380.2.1 | Tomato | plasma membrane | 58.46 | 56.29 |
| TraesCS3A01G527000.1 | Wheat | plasma membrane | 58.75 | 56.09 |
| AT5G59520.1 | Thale cress | plasma membrane | 58.75 | 56.09 |
| EES04298 | Sorghum | plasma membrane | 59.64 | 55.68 |
| Zm00001d041959_P001 | Maize | plasma membrane | 57.27 | 54.83 |
| HORVU3Hr1G114990.3 | Barley | plasma membrane | 57.57 | 54.49 |
| CDY53449 | Canola | plasma membrane | 56.97 | 53.93 |
| GSMUA_Achr8P26320_001 | Banana | plasma membrane | 55.79 | 53.71 |
| Bra020314.1-P | Field mustard | plasma membrane | 56.68 | 53.65 |
| CDY48680 | Canola | plasma membrane | 56.68 | 53.65 |
| KXG39153 | Sorghum | plasma membrane | 54.3 | 51.12 |
| TraesCS6A01G099800.1 | Wheat | plasma membrane | 54.3 | 50.69 |
| Os03t0411800-01 | Rice | plasma membrane | 53.12 | 50.0 |
| TraesCS6B01G128000.1 | Wheat | plasma membrane | 54.01 | 50.0 |
| TraesCS6D01G082600.1 | Wheat | plasma membrane | 54.01 | 50.0 |
| KRH23101 | Soybean | plasma membrane | 29.38 | 49.5 |
| Zm00001d029497_P001 | Maize | mitochondrion, plasma membrane | 52.52 | 48.9 |
| TraesCS5A01G256100.1 | Wheat | plasma membrane | 43.32 | 36.5 |
| HORVU5Hr1G071590.3 | Barley | plasma membrane | 27.0 | 25.28 |
| HORVU6Hr1G018070.11 | Barley | vacuole | 26.71 | 25.14 |
Protein Annotations
| MapMan:24.2.11.1 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005385 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0030001 | GO:GO:0046873 | GO:GO:0055085 |
| GO:GO:0071577 | UniProt:K4C344 | PFAM:PF02535 | PANTHER:PTHR11040 | PANTHER:PTHR11040:SF23 | SignalP:SignalP-TM |
| EnsemblPlantsGene:Solyc06g005620.2 | EnsemblPlants:Solyc06g005620.2.1 | TMHMM:TMhelix | UniParc:UPI0002765D20 | InterPro:ZIP | SEG:seg |
Description
No Description!
Coordinates
chr6:-:678159..680743
Molecular Weight (calculated)
36784.1 Da
IEP (calculated)
6.152
GRAVY (calculated)
0.588
Length
337 amino acids
Sequence
(BLAST)
(BLAST)
001: MIMTSIKKST TLLTLFLFLF LKFLIINGHG GADDDDEHDS NGDTNTNLRA KGLILVKIYC LIILFVTTFV GGVSPYFYRW NEGFLLLGTQ FAGGVFLGTS
101: LMHFLSDSAT TFGVLTEKEY PFAFMLASAG YLLTMFSDCI IMFVTKGGVN ESSESKVEVD EEGRSTNIDE GHGTNPFLKT TSLGDTILLI LALCFHSIFE
201: GIAVGVSASK GEAWRNLWTI SLHKIFAAIA MGIALLRMIP KRPFLLTCAY SFAFAISSPI GVGIGIAIDA TSEGRTADWT YAISMAIACG VFIYVAINHL
301: IAKGFKPQNK CYFDTQFFKF VAVLLGVGVI AVVMIWD
101: LMHFLSDSAT TFGVLTEKEY PFAFMLASAG YLLTMFSDCI IMFVTKGGVN ESSESKVEVD EEGRSTNIDE GHGTNPFLKT TSLGDTILLI LALCFHSIFE
201: GIAVGVSASK GEAWRNLWTI SLHKIFAAIA MGIALLRMIP KRPFLLTCAY SFAFAISSPI GVGIGIAIDA TSEGRTADWT YAISMAIACG VFIYVAINHL
301: IAKGFKPQNK CYFDTQFFKF VAVLLGVGVI AVVMIWD
001: MALSSKTLKS TLFFLSIIFL CFSLILAHGG IDDGDEEEET NQPPPATGTT TVVNLRSKSL VLVKIYCIII LFFSTFLAGV SPYFYRWNES FLLLGTQFSG
101: GIFLATALIH FLSDANETFR GLKHKEYPYA FMLAAAGYCL TMLADVAVAF VAAGSNNNHV GASVGESRED DDVAVKEEGR REIKSGVDVS QALIRTSGFG
201: DTALLIFALC FHSIFEGIAI GLSDTKSDAW RNLWTISLHK VFAAVAMGIA LLKLIPKRPF FLTVVYSFAF GISSPIGVGI GIGINATSQG AGGDWTYAIS
301: MGLACGVFVY VAVNHLISKG YKPREECYFD KPIYKFIAVF LGVALLSVVM IWD
101: GIFLATALIH FLSDANETFR GLKHKEYPYA FMLAAAGYCL TMLADVAVAF VAAGSNNNHV GASVGESRED DDVAVKEEGR REIKSGVDVS QALIRTSGFG
201: DTALLIFALC FHSIFEGIAI GLSDTKSDAW RNLWTISLHK VFAAVAMGIA LLKLIPKRPF FLTVVYSFAF GISSPIGVGI GIGINATSQG AGGDWTYAIS
301: MGLACGVFVY VAVNHLISKG YKPREECYFD KPIYKFIAVF LGVALLSVVM IWD
Arabidopsis Description
ZIP2Zinc transporter 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTH9]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.