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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 6
  • vacuole 6
  • plasma membrane 8
  • golgi 5
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d029497_P001 Maize mitochondrion, plasma membrane 83.8 82.87
Os03t0411800-01 Rice plasma membrane 75.98 75.98
TraesCS6A01G099800.1 Wheat plasma membrane 74.02 73.41
TraesCS6D01G082600.1 Wheat plasma membrane 74.58 73.35
TraesCS6B01G128000.1 Wheat plasma membrane 73.74 72.53
GSMUA_Achr8P26320_001 Banana plasma membrane 63.41 64.86
VIT_06s0004g05070.t01 Wine grape plasma membrane 51.68 56.57
KRH10232 Soybean plasma membrane 53.63 56.14
KRH10230 Soybean plasma membrane 53.07 55.07
PGSC0003DMT400005506 Potato plasma membrane 51.12 54.79
KRH23102 Soybean plasma membrane 53.35 54.57
Solyc06g005620.2.1 Tomato plasma membrane 51.12 54.3
EES04298 Sorghum plasma membrane 51.12 50.69
TraesCS5A01G256100.1 Wheat plasma membrane 56.42 50.5
Bra020314.1-P Field mustard plasma membrane 49.72 50.0
CDY53449 Canola plasma membrane 49.72 50.0
CDY48680 Canola plasma membrane 49.44 49.72
AT5G59520.1 Thale cress plasma membrane 48.32 49.01
KRH23101 Soybean plasma membrane 23.74 42.5
HORVU6Hr1G018070.11 Barley vacuole 36.59 36.59
HORVU5Hr1G071590.3 Barley plasma membrane 35.47 35.28
Protein Annotations
MapMan:24.2.11.1UniProt:A0A1B6QML3GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810
GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0030001GO:GO:0046873GO:GO:0055085
EnsemblPlants:KXG39153ProteinID:KXG39153ProteinID:KXG39153.1PFAM:PF02535PANTHER:PTHR11040PANTHER:PTHR11040:SF23
EnsemblPlantsGene:SORBI_3001G339600SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI000220704FInterPro:ZIPSEG:seg
Description
hypothetical protein
Coordinates
chr1:+:62735381..62738856
Molecular Weight (calculated)
37422.3 Da
IEP (calculated)
5.968
GRAVY (calculated)
0.563
Length
358 amino acids
Sequence
(BLAST)
001: MARATNAHYH LHLLLLLCLS LAAAAWAHGG GGGDGDGDSD DADADAPRPD LRARGLVEAK LWCLAVVFAG TLLGGVSPYF LRWNEAFLAL GTQFAGGVFL
101: GTALMHFLSD ADETFGDLLP DSGYPWAFML ACAGYVVTMF ADVAISYVVS RSRTAGSSSG SAAAGLEEGK MGATNGTISD PTPPETHGSD HSAASMLRNA
201: STLGDSVLLI VALCFHSVFE GIAIGVAETK ADAWKALWTI SLHKIFAAIA MGIALLRMLP NRPLLSCFAY AFAFAISSPI GVGIGIVIDA TTQGRVADWI
301: FAVSMGLATG VFVYVSISHL LSKGYKPRRP VAVDTPVGRW LAVVLGVAVI AVVMIWDT
Best Arabidopsis Sequence Match ( AT1G55910.1 )
(BLAST)
001: MSRSLVFFFL FLVLVVPCLS HGTGGDHDDD EASHVKSSDL KSKSLISVKI ACLVIIFVLT FISGVSPYFL KWSQGFLVLG TQFAGGVFLA TALMHFLSDA
101: DETFRGLLTA EGESEPSPAY PFAYMLACAG FMLTMLADSV IAHIYSKTQN DLELQGEDKS NQRSATTETS IGDSILLIVA LCFHSVFEGI AIGISETKSD
201: AWRALWTITL HKIFAAIAMG IALLRMIPDR PLFSSITYSF AFAISSPIGV AIGIVIDATT QGSIADWIFA LSMSLACGVF VYVSVNHLLA KGYRPNKKVH
301: VDEPRYKFLA VLFGVVVIAI VMIWDT
Arabidopsis Description
ZIP11Zinc transporter 11 [Source:UniProtKB/Swiss-Prot;Acc:Q94EG9]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.