Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- mitochondrion 1
- endoplasmic reticulum 4
- extracellular 3
- vacuole 3
- plasma membrane 5
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G128000.1 | Wheat | plasma membrane | 94.18 | 93.41 |
| TraesCS6D01G082600.1 | Wheat | plasma membrane | 91.41 | 90.66 |
| Os03t0411800-01 | Rice | plasma membrane | 77.56 | 78.21 |
| KXG39153 | Sorghum | plasma membrane | 73.41 | 74.02 |
| Zm00001d029497_P001 | Maize | mitochondrion, plasma membrane | 72.85 | 72.65 |
| GSMUA_Achr8P26320_001 | Banana | plasma membrane | 62.6 | 64.57 |
| TraesCS5A01G256100.1 | Wheat | plasma membrane | 66.2 | 59.75 |
| VIT_06s0004g05070.t01 | Wine grape | plasma membrane | 51.52 | 56.88 |
| KRH23102 | Soybean | plasma membrane | 54.02 | 55.71 |
| KRH10232 | Soybean | plasma membrane | 52.63 | 55.56 |
| KRH10230 | Soybean | plasma membrane | 52.91 | 55.36 |
| PGSC0003DMT400005506 | Potato | plasma membrane | 50.69 | 54.79 |
| Solyc06g005620.2.1 | Tomato | plasma membrane | 50.69 | 54.3 |
| TraesCS3A01G527000.1 | Wheat | plasma membrane | 49.58 | 50.71 |
| AT5G59520.1 | Thale cress | plasma membrane | 47.09 | 48.16 |
| CDY53449 | Canola | plasma membrane | 47.37 | 48.03 |
| Bra020314.1-P | Field mustard | plasma membrane | 47.37 | 48.03 |
| CDY48680 | Canola | plasma membrane | 47.09 | 47.75 |
| KRH23101 | Soybean | plasma membrane | 25.21 | 45.5 |
Protein Annotations
| EnsemblPlants:TraesCS6A01G099800.1 | EnsemblPlantsGene:TraesCS6A01G099800 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0016020 | GO:GO:0030001 | GO:GO:0046873 | GO:GO:0055085 | InterPro:ZIP |
| PANTHER:PTHR11040 | PANTHER:PTHR11040:SF23 | PFAM:PF02535 | SEG:seg | SignalP:SignalP-TM | TMHMM:TMhelix |
| MapMan:24.2.11.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr6A:+:67372332..67374145
Molecular Weight (calculated)
37298.0 Da
IEP (calculated)
5.510
GRAVY (calculated)
0.514
Length
361 amino acids
Sequence
(BLAST)
(BLAST)
001: MATAASSRHH LLLLLWLCAA ASTAWAHGGG GDDDADSGDA DADGGEKPDL RAPGLVAVKL WCLALVFAGT LAGGVSPYFM RWNEAFLALG TQFAGGVFLG
101: TAMMHFLSDA NETFGDLVPS SEYPFAFMLA CAGYVLTMLA ECAISSVVAR GRTAPAAAPA TTAGELEEGK LGSTNGNGSD QRAADAHGPS ATGHSTASML
201: RNASTLGDSI LLIAALCFHS VFEGIAIGVA ETKADAWKAL WTISLHKVFA AVAMGIALLR MLPNRPLLSC FAYAFAFAVS SPVGVGVGIA IDATTQGDVA
301: DWVFAVSMGL ATGIFIYVSV NHLLSKGYKP QRPVKADTPL GRWLAVVLGV GVIAVVMIWD T
101: TAMMHFLSDA NETFGDLVPS SEYPFAFMLA CAGYVLTMLA ECAISSVVAR GRTAPAAAPA TTAGELEEGK LGSTNGNGSD QRAADAHGPS ATGHSTASML
201: RNASTLGDSI LLIAALCFHS VFEGIAIGVA ETKADAWKAL WTISLHKVFA AVAMGIALLR MLPNRPLLSC FAYAFAFAVS SPVGVGVGIA IDATTQGDVA
301: DWVFAVSMGL ATGIFIYVSV NHLLSKGYKP QRPVKADTPL GRWLAVVLGV GVIAVVMIWD T
001: MSRSLVFFFL FLVLVVPCLS HGTGGDHDDD EASHVKSSDL KSKSLISVKI ACLVIIFVLT FISGVSPYFL KWSQGFLVLG TQFAGGVFLA TALMHFLSDA
101: DETFRGLLTA EGESEPSPAY PFAYMLACAG FMLTMLADSV IAHIYSKTQN DLELQGEDKS NQRSATTETS IGDSILLIVA LCFHSVFEGI AIGISETKSD
201: AWRALWTITL HKIFAAIAMG IALLRMIPDR PLFSSITYSF AFAISSPIGV AIGIVIDATT QGSIADWIFA LSMSLACGVF VYVSVNHLLA KGYRPNKKVH
301: VDEPRYKFLA VLFGVVVIAI VMIWDT
101: DETFRGLLTA EGESEPSPAY PFAYMLACAG FMLTMLADSV IAHIYSKTQN DLELQGEDKS NQRSATTETS IGDSILLIVA LCFHSVFEGI AIGISETKSD
201: AWRALWTITL HKIFAAIAMG IALLRMIPDR PLFSSITYSF AFAISSPIGV AIGIVIDATT QGSIADWIFA LSMSLACGVF VYVSVNHLLA KGYRPNKKVH
301: VDEPRYKFLA VLFGVVVIAI VMIWDT
Arabidopsis Description
ZIP11Zinc transporter 11 [Source:UniProtKB/Swiss-Prot;Acc:Q94EG9]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.