Factsheet for TraesCS3A01G527000.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

mitochondrion 1
plasma membrane 6
extracellular 3
endoplasmic reticulum 3
vacuole 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
iPSORT:	mitochondrion
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G532400.1	Wheat	plasma membrane	91.5	91.76
TraesCS3B01G595100.1	Wheat	plasma membrane	90.08	89.58
HORVU3Hr1G114990.3	Barley	plasma membrane	82.44	81.74
Os01t0972200-00	Rice	plasma membrane	66.86	67.05
EES04298	Sorghum	plasma membrane	66.86	65.37
Zm00001d041959_P001	Maize	plasma membrane	63.46	63.64
VIT_06s0004g05070.t01	Wine grape	plasma membrane	57.79	62.39
GSMUA_Achr7P15050_001	Banana	plasma membrane	57.22	60.48
PGSC0003DMT400005506	Potato	plasma membrane	56.37	59.58
Solyc06g005620.2.1	Tomato	plasma membrane	56.09	58.75
KRH10230	Soybean	plasma membrane	53.82	55.07
KRH10232	Soybean	plasma membrane	53.26	54.97
KRH23102	Soybean	plasma membrane	54.11	54.57
AT5G59520.1	Thale cress	plasma membrane	53.82	53.82
CDY53449	Canola	plasma membrane	53.26	52.81
Bra020314.1-P	Field mustard	plasma membrane	52.97	52.53
CDY48680	Canola	plasma membrane	52.69	52.25
TraesCS6A01G099800.1	Wheat	plasma membrane	50.71	49.58
KRH23101	Soybean	plasma membrane	26.35	46.5
TraesCS5A01G256100.1	Wheat	plasma membrane	41.36	36.5

Protein Annotations

EnsemblPlants:TraesCS3A01G527000.1	EnsemblPlantsGene:TraesCS3A01G527000	Gene3D:1.20.140.150	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0006829	GO:GO:0008150	GO:GO:0016020	GO:GO:0030001	GO:GO:0046873
GO:GO:0055085	InterPro:ZIP	PANTHER:PTHR11040	PANTHER:PTHR11040:SF23	PFAM:PF02535	SEG:seg
SignalP:SignalP-noTM	TMHMM:TMhelix	MapMan:24.2.11.1	:	:	:

Description

No Description!

Coordinates

chr3A:+:740881859..740883099

Molecular Weight (calculated)

38223.9 Da

IEP (calculated)

6.277

GRAVY (calculated)

0.543

Length

353 amino acids

Sequence
(BLAST)

001: MAKMARSTRR TSNLICTLLL LSLLLLTCFF QQASGHGGVD HGDGDEEDED GHHGDAGVGG GLRSRGLIAV KVWCLVILLV FTFLGGVSPY FYRWNEAFLL
101: LGTQFAAGIF LGTALMHYLA DVTETFHALT DSPYPFSFML ACAGFLLTML SDVVIVAVAN RQRVNRAAPI QKEAEEEGES TSEGPAVAHA HPMLMTATSS
201: FEDAILLIIA LCFHSIFEGI AIGVSATKGE AWRNLWTIGL HKIFAAVAMG IALLRMIPKR PFLLTVLYSL AFAVSSPVGV GIGIAIDATA EGSDWTYAIS
301: MGITTGVFVY IAINHLMAKG YRPQQPNYFD KPIFKFLSVL TGISVMCVVM IWD

Best Arabidopsis Sequence Match ( AT5G59520.1 )
(BLAST)

001: MALSSKTLKS TLFFLSIIFL CFSLILAHGG IDDGDEEEET NQPPPATGTT TVVNLRSKSL VLVKIYCIII LFFSTFLAGV SPYFYRWNES FLLLGTQFSG
101: GIFLATALIH FLSDANETFR GLKHKEYPYA FMLAAAGYCL TMLADVAVAF VAAGSNNNHV GASVGESRED DDVAVKEEGR REIKSGVDVS QALIRTSGFG
201: DTALLIFALC FHSIFEGIAI GLSDTKSDAW RNLWTISLHK VFAAVAMGIA LLKLIPKRPF FLTVVYSFAF GISSPIGVGI GIGINATSQG AGGDWTYAIS
301: MGLACGVFVY VAVNHLISKG YKPREECYFD KPIYKFIAVF LGVALLSVVM IWD

Arabidopsis Description

ZIP2Zinc transporter 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTH9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.