Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 6
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G128000.1 | Wheat | plasma membrane | 93.13 | 93.13 |
| TraesCS6A01G099800.1 | Wheat | plasma membrane | 90.66 | 91.41 |
| Os03t0411800-01 | Rice | plasma membrane | 78.85 | 80.17 |
| KXG39153 | Sorghum | plasma membrane | 73.35 | 74.58 |
| Zm00001d029497_P001 | Maize | mitochondrion, plasma membrane | 73.63 | 74.03 |
| GSMUA_Achr8P26320_001 | Banana | plasma membrane | 62.91 | 65.43 |
| VIT_06s0004g05070.t01 | Wine grape | plasma membrane | 51.37 | 57.19 |
| KRH23102 | Soybean | plasma membrane | 53.3 | 55.43 |
| KRH10232 | Soybean | plasma membrane | 51.92 | 55.26 |
| KRH10230 | Soybean | plasma membrane | 51.65 | 54.49 |
| PGSC0003DMT400005506 | Potato | plasma membrane | 50.0 | 54.49 |
| Solyc06g005620.2.1 | Tomato | plasma membrane | 50.0 | 54.01 |
| TraesCS3D01G532400.1 | Wheat | plasma membrane | 48.9 | 50.57 |
| AT5G59520.1 | Thale cress | plasma membrane | 46.98 | 48.44 |
| HORVU6Hr1G018070.11 | Barley | vacuole | 46.7 | 47.49 |
| CDY53449 | Canola | plasma membrane | 46.43 | 47.47 |
| Bra020314.1-P | Field mustard | plasma membrane | 46.43 | 47.47 |
| CDY48680 | Canola | plasma membrane | 46.15 | 47.19 |
| KRH23101 | Soybean | plasma membrane | 25.0 | 45.5 |
| HORVU5Hr1G071590.3 | Barley | plasma membrane | 43.41 | 43.89 |
Protein Annotations
| EnsemblPlants:TraesCS6D01G082600.1 | EnsemblPlantsGene:TraesCS6D01G082600 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0016020 | GO:GO:0030001 | GO:GO:0046873 | GO:GO:0055085 | InterPro:ZIP |
| PANTHER:PTHR11040 | PANTHER:PTHR11040:SF23 | PFAM:PF02535 | SEG:seg | SignalP:SignalP-TM | TMHMM:TMhelix |
| MapMan:24.2.11.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr6D:-:47804394..47806244
Molecular Weight (calculated)
37652.5 Da
IEP (calculated)
6.017
GRAVY (calculated)
0.552
Length
364 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPATSPRHL LLLLFLWLCA AASTAWAHGG GGDADSGDAD GGGEAKPDLR ARGLVATKLW CLALVFAGTL AGGVSPYFMR WNEAFLALGT QFAGGVFLST
101: AMMHFLSDAN ETFGDLLPHS EYPFAFMLAC AGYVLTMLAE CAISSVVARG RTAPAAAAAP ATSAGELEEG KLSSTNGNGS DQQAAEQDAH GPSATGHSTA
201: SMLRNASTLG DSILLIAALC FHSVFEGIAI GVAETKADAW KALWTISLHK VFAAVAMGIA LLRMLPNRPL LSCFAYAFAF AVSSPIGVAV GIAIDATTQG
301: AVADWIFAVS MGLATGIFIY VSVNHLLSKG YKPQRPVAAD TPLGRWLAVV LGVGVIAVVM IWDT
101: AMMHFLSDAN ETFGDLLPHS EYPFAFMLAC AGYVLTMLAE CAISSVVARG RTAPAAAAAP ATSAGELEEG KLSSTNGNGS DQQAAEQDAH GPSATGHSTA
201: SMLRNASTLG DSILLIAALC FHSVFEGIAI GVAETKADAW KALWTISLHK VFAAVAMGIA LLRMLPNRPL LSCFAYAFAF AVSSPIGVAV GIAIDATTQG
301: AVADWIFAVS MGLATGIFIY VSVNHLLSKG YKPQRPVAAD TPLGRWLAVV LGVGVIAVVM IWDT
001: MSRSLVFFFL FLVLVVPCLS HGTGGDHDDD EASHVKSSDL KSKSLISVKI ACLVIIFVLT FISGVSPYFL KWSQGFLVLG TQFAGGVFLA TALMHFLSDA
101: DETFRGLLTA EGESEPSPAY PFAYMLACAG FMLTMLADSV IAHIYSKTQN DLELQGEDKS NQRSATTETS IGDSILLIVA LCFHSVFEGI AIGISETKSD
201: AWRALWTITL HKIFAAIAMG IALLRMIPDR PLFSSITYSF AFAISSPIGV AIGIVIDATT QGSIADWIFA LSMSLACGVF VYVSVNHLLA KGYRPNKKVH
301: VDEPRYKFLA VLFGVVVIAI VMIWDT
101: DETFRGLLTA EGESEPSPAY PFAYMLACAG FMLTMLADSV IAHIYSKTQN DLELQGEDKS NQRSATTETS IGDSILLIVA LCFHSVFEGI AIGISETKSD
201: AWRALWTITL HKIFAAIAMG IALLRMIPDR PLFSSITYSF AFAISSPIGV AIGIVIDATT QGSIADWIFA LSMSLACGVF VYVSVNHLLA KGYRPNKKVH
301: VDEPRYKFLA VLFGVVVIAI VMIWDT
Arabidopsis Description
ZIP11Zinc transporter 11 [Source:UniProtKB/Swiss-Prot;Acc:Q94EG9]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.