Factsheet for PGSC0003DMT400057089

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 6
plasma membrane 9
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc07g065380.2.1	Tomato	plasma membrane	93.12	92.86
VIT_19s0015g00230.t01	Wine grape	plasma membrane	68.19	68.59
VIT_19s0015g00190.t01	Wine grape	plasma membrane	67.91	68.5
VIT_19s0015g00210.t01	Wine grape	plasma membrane	67.62	68.41
VIT_19s0015g00250.t01	Wine grape	plasma membrane	67.34	67.14
Bra030826.1-P	Field mustard	plasma membrane	60.74	65.43
CDY42395	Canola	plasma membrane	60.74	65.43
CDY10522	Canola	plasma membrane	60.46	65.12
AT1G55910.1	Thale cress	plasma membrane	59.89	64.11
KRG98522	Soybean	plasma membrane	65.04	63.06
KRH46349	Soybean	plasma membrane	62.75	62.75
PGSC0003DMT400005506	Potato	plasma membrane	56.16	58.68

Protein Annotations

Gene3D:1.20.140.150	EntrezGene:102588995	MapMan:24.2.11.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0030001	GO:GO:0046873
GO:GO:0055085	UniProt:M1C0D4	PFAM:PF02535	EnsemblPlantsGene:PGSC0003DMG400022179	PGSC:PGSC0003DMG400022179	EnsemblPlants:PGSC0003DMT400057089
PANTHER:PTHR11040	PANTHER:PTHR11040:SF23	SignalP:SignalP-TM	TMHMM:TMhelix	UniParc:UPI000296705D	RefSeq:XP_015163654.1
InterPro:ZIP	SEG:seg	:	:	:	:

Description

Zinc transporter [Source:PGSC_GENE;Acc:PGSC0003DMG400022179]

Coordinates

chr7:-:55406651..55409430

Molecular Weight (calculated)

37530.8 Da

IEP (calculated)

5.522

GRAVY (calculated)

0.566

Length

349 amino acids

Sequence
(BLAST)

001: MARLHFFLVL FLLLIISAAA HGGDDDGDAD SDSGLSEQSD KPHLRSRPLV LVKIWCLIIV FFGTFIGGVS PYFMKWNEGF LVLGTQFAGG VFLGTALMHF
101: LSDANETFGE LTSKEYPFAY MLACAGYLMT MLADCVICFV YAKQSNNNNN NDVQLQGDAE NGKSNGTVAQ GQSQVSDGRE NDYSKAPLAT ASSLGDSILL
201: IVALCFHSVF EGIAIGVADS QADAWRALWT VSLHKIFAAI AMGIALLRMI PNRPLLSCAA YAFAFAISSP IGVAIGIIID ATTQGVVADW IFAISMGLAC
301: GVFIFVSINH LLSKGYKPQK MVSIDKPHFK FLAVLLGVGI IAVVMIWDT

Best Arabidopsis Sequence Match ( AT1G55910.1 )
(BLAST)

001: MSRSLVFFFL FLVLVVPCLS HGTGGDHDDD EASHVKSSDL KSKSLISVKI ACLVIIFVLT FISGVSPYFL KWSQGFLVLG TQFAGGVFLA TALMHFLSDA
101: DETFRGLLTA EGESEPSPAY PFAYMLACAG FMLTMLADSV IAHIYSKTQN DLELQGEDKS NQRSATTETS IGDSILLIVA LCFHSVFEGI AIGISETKSD
201: AWRALWTITL HKIFAAIAMG IALLRMIPDR PLFSSITYSF AFAISSPIGV AIGIVIDATT QGSIADWIFA LSMSLACGVF VYVSVNHLLA KGYRPNKKVH
301: VDEPRYKFLA VLFGVVVIAI VMIWDT

Arabidopsis Description

ZIP11Zinc transporter 11 [Source:UniProtKB/Swiss-Prot;Acc:Q94EG9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.