Factsheet for VIT_19s0015g00210.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 6
plasma membrane 9
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_19s0015g00250.t01	Wine grape	plasma membrane	89.57	88.29
VIT_19s0015g00230.t01	Wine grape	plasma membrane	87.25	86.74
VIT_19s0015g00190.t01	Wine grape	plasma membrane	85.8	85.55
Solyc07g065380.2.1	Tomato	plasma membrane	69.28	68.29
PGSC0003DMT400057089	Potato	plasma membrane	68.41	67.62
CDY42395	Canola	plasma membrane	59.13	62.96
Bra030826.1-P	Field mustard	plasma membrane	58.84	62.65
CDY10522	Canola	plasma membrane	58.84	62.65
AT1G55910.1	Thale cress	plasma membrane	58.26	61.66
VIT_06s0004g05070.t01	Wine grape	plasma membrane	57.39	60.55
KRG98522	Soybean	plasma membrane	62.9	60.28
KRH46349	Soybean	plasma membrane	60.58	59.89

Protein Annotations

EntrezGene:100258391	wikigene:100258391	MapMan:24.2.11.1	ProteinID:CCB61994	ProteinID:CCB61994.1	UniProt:F6I539
EMBL:FN596747	GO:GO:0003674	GO:GO:0005215	GO:GO:0005385	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0030001	GO:GO:0046873	GO:GO:0055085
GO:GO:0071577	EntrezGene:LOC100258391	wikigene:LOC100258391	PFAM:PF02535	PANTHER:PTHR11040	PANTHER:PTHR11040:SF23
SignalP:SignalP-TM	TMHMM:TMhelix	UniParc:UPI00015CB60B	ArrayExpress:VIT_19s0015g00210	EnsemblPlantsGene:VIT_19s0015g00210	EnsemblPlants:VIT_19s0015g00210.t01
RefSeq:XP_002265513	RefSeq:XP_002265513.1	InterPro:ZIP	SEG:seg	:	:

Description

No Description!

Coordinates

chr19:-:8223503..8231598

Molecular Weight (calculated)

36801.7 Da

IEP (calculated)

4.476

GRAVY (calculated)

0.609

Length

345 amino acids

Sequence
(BLAST)

001: MPRSLLSLSL LLLAFAAVAA AHGGDHDDDG DEPSSDSVDL RTKPLILVKI YCLILVFVGT FIGGVSPYFL KWNETFLVLG TQFAGGVFMG TAMMHFLSDS
101: NETFGDLTSV EYPFAFMLAC AGYLTTMFAD CLVSYVYGKG PSGGGGDVEL QANMQGKSSS NGGNSESLGQ DQNCTELHFV NAPLRTATSL GDNILLIFAL
201: CFHSVFEGIA IGVAETEADA WRALWTVCLH KIFAAIAMGI ALLRMIPDRP LLSCVAYAFA FAISSPVGVA IGIVIDATTQ GAVADWIYAI SMGLACGIFI
301: YVSINHLLSK GYNCQRTVPF DTPNYKFLAV LLGVGVIAVV MIWDT

Best Arabidopsis Sequence Match ( AT1G55910.1 )
(BLAST)

001: MSRSLVFFFL FLVLVVPCLS HGTGGDHDDD EASHVKSSDL KSKSLISVKI ACLVIIFVLT FISGVSPYFL KWSQGFLVLG TQFAGGVFLA TALMHFLSDA
101: DETFRGLLTA EGESEPSPAY PFAYMLACAG FMLTMLADSV IAHIYSKTQN DLELQGEDKS NQRSATTETS IGDSILLIVA LCFHSVFEGI AIGISETKSD
201: AWRALWTITL HKIFAAIAMG IALLRMIPDR PLFSSITYSF AFAISSPIGV AIGIVIDATT QGSIADWIFA LSMSLACGVF VYVSVNHLLA KGYRPNKKVH
301: VDEPRYKFLA VLFGVVVIAI VMIWDT

Arabidopsis Description

ZIP11Zinc transporter 11 [Source:UniProtKB/Swiss-Prot;Acc:Q94EG9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.