Factsheet for VIT_19s0015g00230.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 6
plasma membrane 9
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_19s0015g00210.t01	Wine grape	plasma membrane	86.74	87.25
VIT_19s0015g00250.t01	Wine grape	plasma membrane	84.73	84.0
VIT_19s0015g00190.t01	Wine grape	plasma membrane	81.84	82.08
PGSC0003DMT400057089	Potato	plasma membrane	68.59	68.19
Solyc07g065380.2.1	Tomato	plasma membrane	68.01	67.43
CDY42395	Canola	plasma membrane	59.65	63.89
Bra030826.1-P	Field mustard	plasma membrane	59.37	63.58
CDY10522	Canola	plasma membrane	59.37	63.58
AT1G55910.1	Thale cress	plasma membrane	59.37	63.19
KRH46349	Soybean	plasma membrane	62.54	62.18
KRG98522	Soybean	plasma membrane	63.11	60.83
VIT_06s0004g05070.t01	Wine grape	plasma membrane	56.77	60.24

Protein Annotations

Gene3D:1.20.140.150	EntrezGene:100253257	wikigene:100253257	MapMan:24.2.11.1	ProteinID:CCB61995	ProteinID:CCB61995.1
UniProt:F6I540	EMBL:FN596747	GO:GO:0003674	GO:GO:0005215	GO:GO:0005385	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0030001	GO:GO:0046873
GO:GO:0055085	GO:GO:0071577	EntrezGene:LOC100253257	wikigene:LOC100253257	PFAM:PF02535	PANTHER:PTHR11040
PANTHER:PTHR11040:SF23	SignalP:SignalP-TM	TIGR:TC54525	TMHMM:TMhelix	UniParc:UPI000198577C	ArrayExpress:VIT_19s0015g00230
EnsemblPlantsGene:VIT_19s0015g00230	EnsemblPlants:VIT_19s0015g00230.t01	unigene:Vvi.25064	unigene:Vvi.4029	RefSeq:XP_002265634	RefSeq:XP_002265634.1
RefSeq:XP_003634744	RefSeq:XP_003634744.1	InterPro:ZIP	SEG:seg	:	:

Description

No Description!

Coordinates

chr19:-:8232994..8235321

Molecular Weight (calculated)

36939.8 Da

IEP (calculated)

4.363

GRAVY (calculated)

0.631

Length

347 amino acids

Sequence
(BLAST)

001: MSRSLLSLSL LLLVLAAVAA AHGGDHADDD DGDAPSSDSV DLRAKPLILV KIYCLILVFV GTFIGGVSPY FLKWNETFLV LGTQFAGGVF LGTAMMHFLS
101: DSNETFGDLT SVEYPFAFML ACAGYLMTMF ADCLVSYVYG KGANGGDGDV ELQENMQGKS SSNGGNSESL AQDQNCTEVH SVNAPLRTAT SLGDNILLIF
201: ALCFHSVFEG IAIGVAETEA DAWRALWTVC LHKIFAAIAM GIALLRMIPD RPLLSCVAYA FAFAISSPVG VAIGIVIDAT TQGAVADWIY AISMGLACGI
301: FIYVSINHLL SKGYTCQRTV PFDTPNYKFL AVLLGVGVIA VVMIWDT

Best Arabidopsis Sequence Match ( AT1G55910.1 )
(BLAST)

001: MSRSLVFFFL FLVLVVPCLS HGTGGDHDDD EASHVKSSDL KSKSLISVKI ACLVIIFVLT FISGVSPYFL KWSQGFLVLG TQFAGGVFLA TALMHFLSDA
101: DETFRGLLTA EGESEPSPAY PFAYMLACAG FMLTMLADSV IAHIYSKTQN DLELQGEDKS NQRSATTETS IGDSILLIVA LCFHSVFEGI AIGISETKSD
201: AWRALWTITL HKIFAAIAMG IALLRMIPDR PLFSSITYSF AFAISSPIGV AIGIVIDATT QGSIADWIFA LSMSLACGVF VYVSVNHLLA KGYRPNKKVH
301: VDEPRYKFLA VLFGVVVIAI VMIWDT

Arabidopsis Description

ZIP11Zinc transporter 11 [Source:UniProtKB/Swiss-Prot;Acc:Q94EG9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.