Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- golgi 5
- plasma membrane 6
- endoplasmic reticulum 5
- vacuole 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra011248.1-P | Field mustard | extracellular | 100.0 | 100.0 |
| CDX68723 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 97.44 | 97.44 |
| CDY23278 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 95.38 | 95.38 |
| CDY51476 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 94.36 | 94.36 |
| AT4G31130.1 | Thale cress | endoplasmic reticulum, extracellular | 93.85 | 93.85 |
| Solyc08g006000.2.1 | Tomato | plastid | 66.67 | 66.67 |
| PGSC0003DMT400038484 | Potato | endoplasmic reticulum, extracellular, plasma membrane | 66.67 | 66.67 |
| KRH16093 | Soybean | extracellular | 69.74 | 66.34 |
| KRH52558 | Soybean | extracellular | 64.1 | 65.44 |
| KRG88894 | Soybean | extracellular | 68.21 | 65.2 |
| Solyc08g074400.1.1 | Tomato | extracellular, plasma membrane | 60.51 | 64.48 |
| KRH61896 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 64.1 | 64.1 |
| KRH05017 | Soybean | extracellular | 31.28 | 60.4 |
| PGSC0003DMT400076027 | Potato | extracellular, plasma membrane | 55.38 | 54.55 |
| TraesCS1A01G055200.1 | Wheat | extracellular, plasma membrane, vacuole | 52.82 | 52.02 |
| EES17623 | Sorghum | endoplasmic reticulum, extracellular, plasma membrane | 51.79 | 51.79 |
| TraesCS1D01G055900.1 | Wheat | extracellular, plasma membrane, vacuole | 52.31 | 51.52 |
| TraesCS1B01G072000.1 | Wheat | extracellular, plasma membrane, vacuole | 51.28 | 50.51 |
| Zm00001d035519_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 49.74 | 49.49 |
| GSMUA_Achr9P04190_001 | Banana | endoplasmic reticulum, plasma membrane | 47.69 | 48.95 |
| GSMUA_Achr6P33170_001 | Banana | plasma membrane | 49.23 | 48.0 |
| GSMUA_Achr8P02030_001 | Banana | extracellular | 44.1 | 43.0 |
| GSMUA_Achr8P02050_001 | Banana | extracellular | 44.1 | 43.0 |
| GSMUA_Achr8P02010_001 | Banana | extracellular | 44.1 | 43.0 |
| HORVU1Hr1G010940.3 | Barley | peroxisome | 51.79 | 42.26 |
| Os05t0465400-01 | Rice | endoplasmic reticulum, plasma membrane | 41.54 | 41.97 |
| GSMUA_Achr6P15460_001 | Banana | cytosol, golgi, plasma membrane | 51.79 | 41.22 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum, plasma membrane, vacuole | 42.56 | 40.69 |
| VIT_04s0008g03100.t01 | Wine grape | plasma membrane | 64.62 | 33.07 |
| TraesCS3A01G539400.1 | Wheat | extracellular, plasma membrane, vacuole | 33.33 | 30.09 |
| TraesCS3B01G605200.1 | Wheat | vacuole | 32.82 | 29.63 |
| TraesCS3D01G544900.1 | Wheat | vacuole | 32.82 | 29.63 |
Protein Annotations
| EnsemblPlants:CDY28245 | EnsemblPlantsGene:GSBRNA2T00039980001 | GO:A0A078GNW6 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:DUF1218 | PANTHER:PTHR31769 | PANTHER:PTHR31769:SF9 | PFAM:PF06749 | ProteinID:CDY28245 | ProteinID:CDY28245.1 |
| SEG:seg | SignalP:SignalP-TM | TMHMM:TMhelix | UniParc:UPI0002546BAA | UniProt:A0A078GNW6 | MapMan:35.2 |
Description
BnaA01g06040DBnaA01g06040D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GNW6]
Coordinates
chrLK032216:-:446774..447989
Molecular Weight (calculated)
20870.4 Da
IEP (calculated)
8.324
GRAVY (calculated)
0.374
Length
195 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVTMKQMSL IVSLFGVLSF ILGVIAENKK PASGTPINGK GVVICKYPSD PTVALGYLSA AFLLACTVAG YKSLFISYKG RSVPNSVLFK STTFSVFFNI
101: ALITSGLALS LLLWPTITEQ LHLTRNVHRN LETSCPTAKT GLLGGGAFVS LDSCLFWLVA LMLADNARED HFDEADSRNG DGNSSSRDVN LKIDA
101: ALITSGLALS LLLWPTITEQ LHLTRNVHRN LETSCPTAKT GLLGGGAFVS LDSCLFWLVA LMLADNARED HFDEADSRNG DGNSSSRDVN LKIDA
001: MAVSMKQMSL VVSALGVLSF VLGVIAENKK PASGTPISGK GVVICKYPSD PTVALGYLSA AFLLACTVAG YKSLFISYKG KSVPNSVLFK STSFSVFFNI
101: ALITSGLALS LLLWPTITEQ LHLTRNVHRN LETSCPTAKT GLLGGGAFVS LDSCLFWLVA LMLADNARED HFDEVESRSI DGNSSSRDVN LKIDA
101: ALITSGLALS LLLWPTITEQ LHLTRNVHRN LETSCPTAKT GLLGGGAFVS LDSCLFWLVA LMLADNARED HFDEVESRSI DGNSSSRDVN LKIDA
Arabidopsis Description
At4g31130 [Source:UniProtKB/TrEMBL;Acc:Q9M089]
SUBAcon: [extracellular,endoplasmic reticulum]
SUBAcon: [extracellular,endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.