Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- extracellular 5
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 6
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc08g006000.2.1 | Tomato | plastid | 96.41 | 96.41 |
| AT4G31130.1 | Thale cress | endoplasmic reticulum, extracellular | 67.69 | 67.69 |
| Bra011248.1-P | Field mustard | extracellular | 66.67 | 66.67 |
| CDY28245 | Canola | extracellular | 66.67 | 66.67 |
| Bra010253.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane | 65.64 | 65.64 |
| CDX68723 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 65.64 | 65.64 |
| CDY23278 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 65.64 | 65.64 |
| CDY51476 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 65.64 | 65.64 |
| KRH05017 | Soybean | extracellular | 32.82 | 63.37 |
| PGSC0003DMT400076027 | Potato | extracellular, plasma membrane | 63.08 | 62.12 |
| KRG88894 | Soybean | extracellular | 64.62 | 61.76 |
| KRH16093 | Soybean | extracellular | 64.62 | 61.46 |
| KRH52558 | Soybean | extracellular | 59.49 | 60.73 |
| KRH61896 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 58.97 | 58.97 |
| EES17623 | Sorghum | endoplasmic reticulum, extracellular, plasma membrane | 52.82 | 52.82 |
| TraesCS1D01G055900.1 | Wheat | extracellular, plasma membrane, vacuole | 51.79 | 51.01 |
| TraesCS1A01G055200.1 | Wheat | extracellular, plasma membrane, vacuole | 51.79 | 51.01 |
| TraesCS1B01G072000.1 | Wheat | extracellular, plasma membrane, vacuole | 51.28 | 50.51 |
| Zm00001d035519_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 50.26 | 50.0 |
| GSMUA_Achr6P33170_001 | Banana | plasma membrane | 50.77 | 49.5 |
| GSMUA_Achr9P04190_001 | Banana | endoplasmic reticulum, plasma membrane | 48.21 | 49.47 |
| Os05t0465400-01 | Rice | endoplasmic reticulum, plasma membrane | 43.08 | 43.52 |
| GSMUA_Achr8P02030_001 | Banana | extracellular | 44.62 | 43.5 |
| GSMUA_Achr8P02010_001 | Banana | extracellular | 44.62 | 43.5 |
| GSMUA_Achr8P02050_001 | Banana | extracellular | 44.62 | 43.5 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum, plasma membrane, vacuole | 44.1 | 42.16 |
| HORVU1Hr1G010940.3 | Barley | peroxisome | 50.77 | 41.42 |
| GSMUA_Achr6P15460_001 | Banana | cytosol, golgi, plasma membrane | 51.28 | 40.82 |
| VIT_04s0008g03100.t01 | Wine grape | plasma membrane | 69.74 | 35.7 |
| TraesCS3A01G539400.1 | Wheat | extracellular, plasma membrane, vacuole | 33.33 | 30.09 |
| TraesCS3B01G605200.1 | Wheat | vacuole | 32.82 | 29.63 |
| TraesCS3D01G544900.1 | Wheat | vacuole | 31.79 | 28.7 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400038484 | EnsemblPlantsGene:PGSC0003DMG400014853 | EntrezGene:102598753 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:DUF1218 | PANTHER:PTHR31769 | PANTHER:PTHR31769:SF9 | PFAM:PF06749 | PGSC:PGSC0003DMG400014853 | RefSeq:XP_006357019.1 |
| RefSeq:XP_006357020.1 | SEG:seg | SignalP:SignalP-TM | TMHMM:TMhelix | UniParc:UPI00029659C4 | UniProt:M1B6Y2 |
| MapMan:35.2 | : | : | : | : | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400014853]
Coordinates
chr8:+:2679390..2684507
Molecular Weight (calculated)
20799.4 Da
IEP (calculated)
8.203
GRAVY (calculated)
0.443
Length
195 amino acids
Sequence
(BLAST)
(BLAST)
001: MAIGMKQMSM IIATLGVLSF IFGVIAENKK PAAGTAISGK GVVICKYKSD PTVALGYLSF VFLAASSVAG FLSLFYPYQG KSVPQAALLR NTSFVVFLNI
101: ALGTTGLAAT LLLWPTITEQ LHITRNIHHN LQTDCPTAKT GLLGGGAFLS LDSALFWLVA LMLADNARED YFQETNVKGE PKASYADDEI IKSSA
101: ALGTTGLAAT LLLWPTITEQ LHITRNIHHN LQTDCPTAKT GLLGGGAFLS LDSALFWLVA LMLADNARED YFQETNVKGE PKASYADDEI IKSSA
001: MAVSMKQMSL VVSALGVLSF VLGVIAENKK PASGTPISGK GVVICKYPSD PTVALGYLSA AFLLACTVAG YKSLFISYKG KSVPNSVLFK STSFSVFFNI
101: ALITSGLALS LLLWPTITEQ LHLTRNVHRN LETSCPTAKT GLLGGGAFVS LDSCLFWLVA LMLADNARED HFDEVESRSI DGNSSSRDVN LKIDA
101: ALITSGLALS LLLWPTITEQ LHLTRNVHRN LETSCPTAKT GLLGGGAFVS LDSCLFWLVA LMLADNARED HFDEVESRSI DGNSSSRDVN LKIDA
Arabidopsis Description
At4g31130 [Source:UniProtKB/TrEMBL;Acc:Q9M089]
SUBAcon: [endoplasmic reticulum,extracellular]
SUBAcon: [endoplasmic reticulum,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.