Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 6
- golgi 5
- extracellular 6
- vacuole 4
- plasma membrane 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra011248.1-P | Field mustard | extracellular | 93.85 | 93.85 |
| CDY28245 | Canola | extracellular | 93.85 | 93.85 |
| CDX68723 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 92.31 | 92.31 |
| CDY23278 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 91.79 | 91.79 |
| CDY51476 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 91.79 | 91.79 |
| Bra010253.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane | 91.79 | 91.79 |
| Solyc08g006000.2.1 | Tomato | plastid | 67.69 | 67.69 |
| PGSC0003DMT400038484 | Potato | endoplasmic reticulum, extracellular, plasma membrane | 67.69 | 67.69 |
| Solyc08g074400.1.1 | Tomato | extracellular, plasma membrane | 61.54 | 65.57 |
| KRH16093 | Soybean | extracellular | 67.18 | 63.9 |
| KRH52558 | Soybean | extracellular | 62.05 | 63.35 |
| KRG88894 | Soybean | extracellular | 66.15 | 63.24 |
| KRH61896 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 62.56 | 62.56 |
| KRH05017 | Soybean | extracellular | 31.28 | 60.4 |
| PGSC0003DMT400076027 | Potato | extracellular, plasma membrane | 55.9 | 55.05 |
| TraesCS1A01G055200.1 | Wheat | extracellular, plasma membrane, vacuole | 53.85 | 53.03 |
| TraesCS1D01G055900.1 | Wheat | extracellular, plasma membrane, vacuole | 53.33 | 52.53 |
| TraesCS1B01G072000.1 | Wheat | extracellular, plasma membrane, vacuole | 52.31 | 51.52 |
| EES17623 | Sorghum | endoplasmic reticulum, extracellular, plasma membrane | 51.28 | 51.28 |
| Zm00001d035519_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 50.77 | 50.51 |
| GSMUA_Achr9P04190_001 | Banana | endoplasmic reticulum, plasma membrane | 48.21 | 49.47 |
| GSMUA_Achr6P33170_001 | Banana | plasma membrane | 49.74 | 48.5 |
| GSMUA_Achr8P02050_001 | Banana | extracellular | 44.62 | 43.5 |
| GSMUA_Achr8P02030_001 | Banana | extracellular | 44.62 | 43.5 |
| GSMUA_Achr8P02010_001 | Banana | extracellular | 44.62 | 43.5 |
| HORVU1Hr1G010940.3 | Barley | peroxisome | 52.82 | 43.1 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum, plasma membrane, vacuole | 44.1 | 42.16 |
| Os05t0465400-01 | Rice | endoplasmic reticulum, plasma membrane | 41.54 | 41.97 |
| GSMUA_Achr6P15460_001 | Banana | cytosol, golgi, plasma membrane | 50.77 | 40.41 |
| VIT_04s0008g03100.t01 | Wine grape | plasma membrane | 65.13 | 33.33 |
| TraesCS3B01G605200.1 | Wheat | vacuole | 33.33 | 30.09 |
| TraesCS3A01G539400.1 | Wheat | extracellular, plasma membrane, vacuole | 32.82 | 29.63 |
| TraesCS3D01G544900.1 | Wheat | vacuole | 32.31 | 29.17 |
Protein Annotations
| MapMan:35.2 | EntrezGene:829241 | UniProt:A0A178V2H8 | ProteinID:AEE85862.1 | ArrayExpress:AT4G31130 | EnsemblPlantsGene:AT4G31130 |
| RefSeq:AT4G31130 | TAIR:AT4G31130 | RefSeq:AT4G31130-TAIR-G | EnsemblPlants:AT4G31130.1 | TAIR:AT4G31130.1 | Unigene:At.43091 |
| EMBL:BT004774 | ProteinID:CAB79831.1 | InterPro:DUF1218 | GO:GO:0003674 | GO:GO:0005575 | GO:GO:0005623 |
| GO:GO:0005886 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | RefSeq:NP_194842.1 | ProteinID:OAP00560.1 |
| PFAM:PF06749 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PANTHER:PTHR31769 |
| PANTHER:PTHR31769:SF9 | UniProt:Q9M089 | SignalP:SignalP-TM | TMHMM:TMhelix | UniParc:UPI000000C47C | SEG:seg |
Description
At4g31130 [Source:UniProtKB/TrEMBL;Acc:Q9M089]
Coordinates
chr4:-:15136909..15138871
Molecular Weight (calculated)
20754.3 Da
IEP (calculated)
8.323
GRAVY (calculated)
0.433
Length
195 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVSMKQMSL VVSALGVLSF VLGVIAENKK PASGTPISGK GVVICKYPSD PTVALGYLSA AFLLACTVAG YKSLFISYKG KSVPNSVLFK STSFSVFFNI
101: ALITSGLALS LLLWPTITEQ LHLTRNVHRN LETSCPTAKT GLLGGGAFVS LDSCLFWLVA LMLADNARED HFDEVESRSI DGNSSSRDVN LKIDA
101: ALITSGLALS LLLWPTITEQ LHLTRNVHRN LETSCPTAKT GLLGGGAFVS LDSCLFWLVA LMLADNARED HFDEVESRSI DGNSSSRDVN LKIDA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.