Subcellular Localization
min:
: max
Winner_takes_all: extracellular, plasma membrane, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- golgi 4
- plasma membrane 5
- endoplasmic reticulum 4
- vacuole 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G055200.1 | Wheat | extracellular, plasma membrane, vacuole | 97.98 | 97.98 |
| TraesCS1D01G055900.1 | Wheat | extracellular, plasma membrane, vacuole | 93.43 | 93.43 |
| EES17623 | Sorghum | endoplasmic reticulum, extracellular, plasma membrane | 78.28 | 79.49 |
| Zm00001d035519_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 76.77 | 77.55 |
| HORVU1Hr1G010940.3 | Barley | peroxisome | 91.92 | 76.15 |
| GSMUA_Achr6P33170_001 | Banana | plasma membrane | 66.16 | 65.5 |
| GSMUA_Achr9P04190_001 | Banana | endoplasmic reticulum, plasma membrane | 61.11 | 63.68 |
| GSMUA_Achr8P02010_001 | Banana | extracellular | 61.11 | 60.5 |
| GSMUA_Achr8P02050_001 | Banana | extracellular | 61.11 | 60.5 |
| GSMUA_Achr8P02030_001 | Banana | extracellular | 60.61 | 60.0 |
| GSMUA_Achr6P15460_001 | Banana | cytosol, golgi, plasma membrane | 70.71 | 57.14 |
| KRH61896 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 52.53 | 53.33 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum, plasma membrane, vacuole | 54.04 | 52.45 |
| Bra010253.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane | 51.52 | 52.31 |
| CDY51476 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 51.52 | 52.31 |
| AT4G31130.1 | Thale cress | endoplasmic reticulum, extracellular | 51.52 | 52.31 |
| CDY23278 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 51.52 | 52.31 |
| KRH52558 | Soybean | extracellular | 50.0 | 51.83 |
| Solyc08g006000.2.1 | Tomato | plastid | 51.01 | 51.79 |
| CDY28245 | Canola | extracellular | 50.51 | 51.28 |
| Bra011248.1-P | Field mustard | extracellular | 50.51 | 51.28 |
| PGSC0003DMT400038484 | Potato | endoplasmic reticulum, extracellular, plasma membrane | 50.51 | 51.28 |
| CDX68723 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 50.0 | 50.77 |
| KRG88894 | Soybean | extracellular | 51.01 | 49.51 |
| KRH16093 | Soybean | extracellular | 51.01 | 49.27 |
| Solyc08g074400.1.1 | Tomato | extracellular, plasma membrane | 45.45 | 49.18 |
| KRH05017 | Soybean | extracellular | 24.24 | 47.52 |
| VIT_04s0008g03090.t01 | Wine grape | extracellular | 47.47 | 46.08 |
| Os05t0465400-01 | Rice | endoplasmic reticulum, plasma membrane | 44.44 | 45.6 |
| PGSC0003DMT400076027 | Potato | extracellular, plasma membrane | 44.44 | 44.44 |
| TraesCS3B01G605200.1 | Wheat | vacuole | 44.95 | 41.2 |
| VIT_04s0008g03100.t01 | Wine grape | plasma membrane | 49.49 | 25.72 |
Protein Annotations
| EnsemblPlants:TraesCS1B01G072000.1 | EnsemblPlantsGene:TraesCS1B01G072000 | InterPro:DUF1218 | PANTHER:PTHR31769 | PANTHER:PTHR31769:SF9 | PFAM:PF06749 |
| SEG:seg | SignalP:SignalP-TM | TMHMM:TMhelix | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chr1B:-:56890943..56894269
Molecular Weight (calculated)
21149.7 Da
IEP (calculated)
5.174
GRAVY (calculated)
0.477
Length
198 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLTSAKGIA LTVSLFGLLA FLLGVVAENK KPPYGTPIKV KDVVICKFPS DPTIAMGSLS IVALVLAAFI GHVAIFYPYK GKSVPRGALF QSTSLSVFFV
101: IAELVSALAF AMLLWATITE GHHRTSNIHH DMDTLCPTAK TGLFGGAAFL ALDAALFWLV CQMLALNARA DYLDEDEDED DKGEYGQVYA TDADGTKV
101: IAELVSALAF AMLLWATITE GHHRTSNIHH DMDTLCPTAK TGLFGGAAFL ALDAALFWLV CQMLALNARA DYLDEDEDED DKGEYGQVYA TDADGTKV
001: MAVSMKQMSL VVSALGVLSF VLGVIAENKK PASGTPISGK GVVICKYPSD PTVALGYLSA AFLLACTVAG YKSLFISYKG KSVPNSVLFK STSFSVFFNI
101: ALITSGLALS LLLWPTITEQ LHLTRNVHRN LETSCPTAKT GLLGGGAFVS LDSCLFWLVA LMLADNARED HFDEVESRSI DGNSSSRDVN LKIDA
101: ALITSGLALS LLLWPTITEQ LHLTRNVHRN LETSCPTAKT GLLGGGAFVS LDSCLFWLVA LMLADNARED HFDEVESRSI DGNSSSRDVN LKIDA
Arabidopsis Description
At4g31130 [Source:UniProtKB/TrEMBL;Acc:Q9M089]
SUBAcon: [extracellular,endoplasmic reticulum]
SUBAcon: [extracellular,endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.