Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 1
- extracellular 5
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 7
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc08g006000.2.1 | Tomato | plastid | 36.22 | 70.77 |
| PGSC0003DMT400038484 | Potato | endoplasmic reticulum, extracellular, plasma membrane | 35.7 | 69.74 |
| Solyc08g074400.1.1 | Tomato | extracellular, plasma membrane | 32.55 | 67.76 |
| AT4G31130.1 | Thale cress | endoplasmic reticulum, extracellular | 33.33 | 65.13 |
| Bra011248.1-P | Field mustard | extracellular | 33.07 | 64.62 |
| CDY28245 | Canola | extracellular | 33.07 | 64.62 |
| Bra010253.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane | 32.81 | 64.1 |
| CDY23278 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 32.81 | 64.1 |
| CDY51476 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 32.81 | 64.1 |
| CDX68723 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 32.55 | 63.59 |
| KRH52558 | Soybean | extracellular | 31.23 | 62.3 |
| KRG88894 | Soybean | extracellular | 33.33 | 62.25 |
| KRH16093 | Soybean | extracellular | 32.81 | 60.98 |
| KRH05017 | Soybean | extracellular | 16.01 | 60.4 |
| KRH61896 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 30.45 | 59.49 |
| VIT_04s0008g03090.t01 | Wine grape | extracellular | 29.92 | 55.88 |
| PGSC0003DMT400076027 | Potato | extracellular, plasma membrane | 27.56 | 53.03 |
| GSMUA_Achr9P04190_001 | Banana | endoplasmic reticulum, plasma membrane | 25.72 | 51.58 |
| TraesCS1A01G055200.1 | Wheat | extracellular, plasma membrane, vacuole | 26.25 | 50.51 |
| EES17623 | Sorghum | endoplasmic reticulum, extracellular, plasma membrane | 25.72 | 50.26 |
| TraesCS1D01G055900.1 | Wheat | extracellular, plasma membrane, vacuole | 25.98 | 50.0 |
| TraesCS1B01G072000.1 | Wheat | extracellular, plasma membrane, vacuole | 25.72 | 49.49 |
| Zm00001d035519_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 24.67 | 47.96 |
| GSMUA_Achr8P02050_001 | Banana | extracellular | 24.15 | 46.0 |
| GSMUA_Achr8P02030_001 | Banana | extracellular | 24.15 | 46.0 |
| GSMUA_Achr8P02010_001 | Banana | extracellular | 24.15 | 46.0 |
| GSMUA_Achr6P33170_001 | Banana | plasma membrane | 24.15 | 46.0 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum, plasma membrane, vacuole | 23.1 | 43.14 |
| Os05t0465400-01 | Rice | endoplasmic reticulum, plasma membrane | 21.0 | 41.45 |
| HORVU1Hr1G010940.3 | Barley | peroxisome | 25.98 | 41.42 |
| GSMUA_Achr6P15460_001 | Banana | cytosol, golgi, plasma membrane | 26.51 | 41.22 |
| TraesCS3B01G605200.1 | Wheat | vacuole | 17.32 | 30.56 |
| TraesCS3A01G539400.1 | Wheat | extracellular, plasma membrane, vacuole | 17.32 | 30.56 |
| TraesCS3D01G544900.1 | Wheat | vacuole | 16.8 | 29.63 |
Protein Annotations
| EntrezGene:100247379 | wikigene:100247379 | EntrezGene:100266365 | wikigene:100266365 | MapMan:35.2 | EMBL:AM483239 |
| ProteinID:CAN64246 | ProteinID:CAN64246.1 | ProteinID:CCB46683 | ProteinID:CCB46683.1 | InterPro:DUF1218 | UniProt:F6H2X2 |
| EMBL:FN595231 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | EntrezGene:LOC100247379 | wikigene:LOC100247379 |
| EntrezGene:LOC100266365 | wikigene:LOC100266365 | PFAM:PF06749 | PANTHER:PTHR31769 | PANTHER:PTHR31769:SF9 | TMHMM:TMhelix |
| UniParc:UPI000210A677 | ArrayExpress:VIT_04s0008g03100 | EnsemblPlantsGene:VIT_04s0008g03100 | EnsemblPlants:VIT_04s0008g03100.t01 | RefSeq:XP_002281035 | RefSeq:XP_002281035.1 |
| RefSeq:XP_002283541 | RefSeq:XP_002283541.1 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr4:+:2564463..2571161
Molecular Weight (calculated)
41109.3 Da
IEP (calculated)
7.563
GRAVY (calculated)
0.441
Length
381 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVTMKQMSV IVTALGVASF IFGIVAENKK PPSGTPTVGT GVIICKYQSD HTILLGFLSF GFLAASSAAG LGSVFYPFKG KSIPYNALFR NTTFTIFFNI
101: TLGLVGMAAA FVLWPTLTEL HHRVHNLHDN LKKECPTAKT GLIGGGGVLS FCSSLFWLIS LMLTDNVRED YFEEMDPQGV MAATIKQMSI IVATLGTLSF
201: MFGVIAENKK PDSGTATLRE GVVICKYSSD PTVVLGYLSV AFLVASTVAG YLSLFYPYKG RSIPQAALFR STSFLVFFNI ALGMAGLAAA MLLWPTITEQ
301: LHLIRNVHHN LNTTCPTAKT GLLGGGAFIA LDASLFWLVS LMLADNVRED YFETVEKDPK GEQSEVLTNE YSSNVPVKGI A
101: TLGLVGMAAA FVLWPTLTEL HHRVHNLHDN LKKECPTAKT GLIGGGGVLS FCSSLFWLIS LMLTDNVRED YFEEMDPQGV MAATIKQMSI IVATLGTLSF
201: MFGVIAENKK PDSGTATLRE GVVICKYSSD PTVVLGYLSV AFLVASTVAG YLSLFYPYKG RSIPQAALFR STSFLVFFNI ALGMAGLAAA MLLWPTITEQ
301: LHLIRNVHHN LNTTCPTAKT GLLGGGAFIA LDASLFWLVS LMLADNVRED YFETVEKDPK GEQSEVLTNE YSSNVPVKGI A
001: MAVSMKQMSL VVSALGVLSF VLGVIAENKK PASGTPISGK GVVICKYPSD PTVALGYLSA AFLLACTVAG YKSLFISYKG KSVPNSVLFK STSFSVFFNI
101: ALITSGLALS LLLWPTITEQ LHLTRNVHRN LETSCPTAKT GLLGGGAFVS LDSCLFWLVA LMLADNARED HFDEVESRSI DGNSSSRDVN LKIDA
101: ALITSGLALS LLLWPTITEQ LHLTRNVHRN LETSCPTAKT GLLGGGAFVS LDSCLFWLVA LMLADNARED HFDEVESRSI DGNSSSRDVN LKIDA
Arabidopsis Description
At4g31130 [Source:UniProtKB/TrEMBL;Acc:Q9M089]
SUBAcon: [endoplasmic reticulum,extracellular]
SUBAcon: [endoplasmic reticulum,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.