Subcellular Localization
min:
: max
Winner_takes_all: extracellular, plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 6
- golgi 5
- plasma membrane 7
- endoplasmic reticulum 5
- vacuole 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc08g074400.1.1 | Tomato | extracellular, plasma membrane | 66.16 | 71.58 |
| PGSC0003DMT400038484 | Potato | endoplasmic reticulum, extracellular, plasma membrane | 62.12 | 63.08 |
| AT4G31130.1 | Thale cress | endoplasmic reticulum, extracellular | 55.05 | 55.9 |
| Bra011248.1-P | Field mustard | extracellular | 54.55 | 55.38 |
| CDY28245 | Canola | extracellular | 54.55 | 55.38 |
| CDX68723 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 54.04 | 54.87 |
| Bra010253.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane | 53.54 | 54.36 |
| CDY23278 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 53.54 | 54.36 |
| CDY51476 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 53.54 | 54.36 |
| KRH52558 | Soybean | extracellular | 48.99 | 50.79 |
| KRH61896 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 48.99 | 49.74 |
| KRH05017 | Soybean | extracellular | 25.25 | 49.51 |
| KRH16093 | Soybean | extracellular | 48.48 | 46.83 |
| EES17623 | Sorghum | endoplasmic reticulum, extracellular, plasma membrane | 45.45 | 46.15 |
| KRG88894 | Soybean | extracellular | 46.97 | 45.59 |
| Zm00001d035519_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 44.95 | 45.41 |
| TraesCS1D01G055900.1 | Wheat | extracellular, plasma membrane, vacuole | 44.95 | 44.95 |
| TraesCS1A01G055200.1 | Wheat | extracellular, plasma membrane, vacuole | 44.95 | 44.95 |
| TraesCS1B01G072000.1 | Wheat | extracellular, plasma membrane, vacuole | 44.44 | 44.44 |
| GSMUA_Achr8P02030_001 | Banana | extracellular | 42.93 | 42.5 |
| GSMUA_Achr8P02010_001 | Banana | extracellular | 42.93 | 42.5 |
| GSMUA_Achr9P04190_001 | Banana | endoplasmic reticulum, plasma membrane | 40.4 | 42.11 |
| GSMUA_Achr8P02050_001 | Banana | extracellular | 42.42 | 42.0 |
| GSMUA_Achr6P33170_001 | Banana | plasma membrane | 42.42 | 42.0 |
| Os05t0465400-01 | Rice | endoplasmic reticulum, plasma membrane | 37.88 | 38.86 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum, plasma membrane, vacuole | 39.9 | 38.73 |
| HORVU1Hr1G010940.3 | Barley | peroxisome | 44.44 | 36.82 |
| GSMUA_Achr6P15460_001 | Banana | cytosol, golgi, plasma membrane | 43.43 | 35.1 |
| TraesCS3A01G539400.1 | Wheat | extracellular, plasma membrane, vacuole | 30.3 | 27.78 |
| VIT_04s0008g03100.t01 | Wine grape | plasma membrane | 53.03 | 27.56 |
| TraesCS3B01G605200.1 | Wheat | vacuole | 28.79 | 26.39 |
| TraesCS3D01G544900.1 | Wheat | vacuole | 27.78 | 25.46 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400076027 | EnsemblPlantsGene:PGSC0003DMG400029564 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:DUF1218 |
| PANTHER:PTHR31769 | PANTHER:PTHR31769:SF9 | PFAM:PF06749 | PGSC:PGSC0003DMG400029564 | SEG:seg | SignalP:SignalP-TM |
| TMHMM:TMhelix | UniParc:UPI0002967342 | UniProt:M1CW29 | MapMan:35.2 | : | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400029564]
Coordinates
chr8:+:45250398..45251189
Molecular Weight (calculated)
21352.3 Da
IEP (calculated)
7.976
GRAVY (calculated)
0.648
Length
198 amino acids
Sequence
(BLAST)
(BLAST)
001: MGFLKSPSNI VWNFFFPLSL FVLCLIVLLL QPANGTAILG KGVVICKYRS DHTVALGLLS VIFLAASAVA GFSSLFYPYK GKSIPKAVLL RSTSFVVFLN
101: VALGTTGLAA VLLLWPIISE QLHSMRNIHH HNLQTGCPTA KTGLLGGGAF LSLDSALFWL VCLMISNNAR DDYFEETAAD LRGGDAVNYE EDVVIKSA
101: VALGTTGLAA VLLLWPIISE QLHSMRNIHH HNLQTGCPTA KTGLLGGGAF LSLDSALFWL VCLMISNNAR DDYFEETAAD LRGGDAVNYE EDVVIKSA
001: MAVSMKQMSL VVSALGVLSF VLGVIAENKK PASGTPISGK GVVICKYPSD PTVALGYLSA AFLLACTVAG YKSLFISYKG KSVPNSVLFK STSFSVFFNI
101: ALITSGLALS LLLWPTITEQ LHLTRNVHRN LETSCPTAKT GLLGGGAFVS LDSCLFWLVA LMLADNARED HFDEVESRSI DGNSSSRDVN LKIDA
101: ALITSGLALS LLLWPTITEQ LHLTRNVHRN LETSCPTAKT GLLGGGAFVS LDSCLFWLVA LMLADNARED HFDEVESRSI DGNSSSRDVN LKIDA
Arabidopsis Description
At4g31130 [Source:UniProtKB/TrEMBL;Acc:Q9M089]
SUBAcon: [extracellular,endoplasmic reticulum]
SUBAcon: [extracellular,endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.